Contig Data
morexGenes
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Map Locations of contig_1577147 (1933 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1577147

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17578 1 474 bp MLOC_17578.1 Available Available LOC_Os03g62680.1, FRAME:-3, EVALUE:5e-18, 13103.m06937 protein hypothetical protein





CDS Structure of MLOC_17578






Contig Sequence (1933 bp)

>contig_1577147 1933 assembly3_WGSMorex_rbca.fasta
CTCCGGTGACGGCCGCGTCGGAGAGGAGGGGCGACGGCGGCAGCAGCACAGGTGAGCTTC
AGAGTTAGCACGGGAGTGTGAGGGGATGAGTGGATAGCATGGGAGTGTGAGGGGATAGGG
AACGCGATGAGGGGGTGAAACTTGGTGTTGGTGACCGATGAGGTTGGTGAGGTCGGGCAG
AGACTTGGAGCCAACACCAACCAGAACATTGCGCTTCTCCGACAGGTTCAATGGCTCACG
CATCCACATAACCTGAAGCTTCAATAGGTGGTCGAGCGCATTGGTGCTGCAGTCAGATCT
CACCAGCCCGTATGCTCGTGCCTCACTCTTCGCGATCGATATGTCCATTAGCTCCTCTTG
AGCGTTGGCTTCGAGATGCCCGCCGAGTACACGCCCTCGCCCATCTCGCTGTAACAGCAT
GTTACTGCCGTCCTGTTGTGGAAAAGGAAGCCGCGAGGAGGGTCGAATGTGTCGACCGAT
AGTCCTGATATGATCAAGATGGCAACGGGTACAACCCGTGGGGTTTTGCCATGACAGAAA
TCCAGGCCCTATCTCCGTCCCCATGAAAGGAACCTCGAGTCCTGAACTCATGCACCGGGA
TAGACATCCACACCCGGTCGGGTTTTCGCCGCTGCCTTCTGGTTTTGAGAATTGAGTTAT
TTTGAAACGAAGAAAACCGATCAAGAGGCATCCAAATTCTATGTGTGAACAGTTTATGAC
ATCCAGAAGGAAGCGCTGTCCGAGAGTAGCAACATAGGGATGGATGCGATCCATTCATCG
ATTTACCTTGTCTCTAGTGCAGTCATCCCCATCGGCACACGCGCTGCTCGGTCTGTTTGA
ACCACCAGAGGTATCGACGCCGCCCGTTGGCGCATCGTGTTGATGCCGGTAGTGGTGTTG
ACCGGCCGTCTCTCCCCGGCCCGGTAGCAAATTCACTGGAGACGACGGGTGGAAGTGTCA
TGTTACTTTGTTCCCGCGGGTGTCACCTCCGTCACCACCATGGCACGAGTATGACAGAAC
TCATCGGCCGCAACATCCTATCTCAGATTTGAGTCCAGTGTTCCGATCTAGCTAGAAATT
GATTCAAAGGATGGACAAATCCCTGGTAGTTAAGCTTGCGATGCATGTGACTGCTATGAA
TTAGGATCGATCCATTCTCTGCTCCGTTTCTCTCCAGATTTTCCTGTCTTGATTGATTTT
ACAAATTTTGTCTTTGTGGAAGCTGCATGAAACGAAGCCGGCACTGCACATGGTGGCATG
ACTCTGTGCAAATTACTTGTATGATGGTTTTGCATTTGGAATTATTAGTAACTAAGTTTG
TGGAGTTTTTCTCATTCTCGAGTGTTACAGACAGCTAGAAGTACAGTCTGTTGTATAAAC
TTTCTATATCGCTATCCACAGATGACATGGAGGGGCATGCTATATTTCTTCCAGGCATCA
CTGTCAGGGTAGGTAACACCACCGGAGAGGGAGCCGCGCGGAAGAACCTTGCGCTCAAAC
GACACAAAACCGACAAGCATGGAGGTAGTCACCCTCTCGAAATAGTGAGCAATGCACCTC
ACTTTGCGCTCCTGGCTCTCCCTCTATGTGAGACAGATGCTATCTAAACTACTGTACTTG
CCCAACTATGCCCCACTCCCTCTACCACCCTCGCGCTGATTTTGCCTATGGAACTGATGG
CCTGGCATCTGCCGGTCAGCTCGGGTGCAGATCGTGCTGTTGTAGATATCTCCCCATCCC
GCATGATAACACGGGAATCCCTAGTCTCAATTTGTCCGTCATTCTCCTCTTTATCTTACT
CCCTAGGTCACCTCCTGCCATCTTCATCTCGCGCCAGAAGTAGCAACGGTAGTGGAGTGG
ACGACGGCTTCGTGCCTGCCGTTGGTGCGTGCTGACGGGCGGTGGCGGTCGACGTGATTC
GACTGGGTCCTGG