Contig Data
morexGenes
Links



Map Locations of contig_1577012 (9210 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1577012

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17545 3 2365 bp MLOC_17545.2 Available Available LOC_Os03g16610.1, FRAME:+2, EVALUE:0.0, 13103.m01973 protein laccase precursor protein, putative, expressed





CDS Structure of MLOC_17545






Contig Sequence (9210 bp)

>contig_1577012 9210 assembly3_WGSMorex_rbca.fasta
CCAGGAGGAGCCGACAGTTGAGGATGTTGTTGCTCCCTTCTATACCAGAGTATAGATGAG
TAGGATTGATGAGCCTACCCCGGGGTTATCCCTCCGTCGATTGTCATCGATATAACCACA
CAACTGGACATGTGTTTTGCCTCAAACTAGCCCAAAAAAAACAACATTCCTTCTGTTTCG
ACACATGCAAGCTAGAGGGGATGCAAGCAATCAATTAACATGCAGATGTTGATTTTTTAC
CTGTATATGATCAGACAAGCCTAGCTGAAACAAATATGCAAAGTGTCAAAAACGATGTAG
GTAACCAAACGCATCCGTGCAATTCTGCCTTTCACGCTAACTGCAAGGAGAGGAGGGGAT
AAATGTCACCGCTAGCTTCTTTCTTTTCTGTCTGGAACTACCAAAACAAATCAGTGTTCC
TTTCTCAACTGGGCACCGTTGTCATGACACCCTAGAAAAGAATTTAAAGCTGTCAAGCAT
ACACCAAAGGGCAACGCTCTGCCCTGGCGCACCGGCTGAATCGTTCGACCGGCCGCGCGC
GGACCGCCCGATCTGCCAGCTGTACGCGGGTCGCGCCGTTAGATCTTCATGCAGCAATTT
TTTCTCGATGCAGCAATTTCGTCAACGGTTGTCACAGAAAAGTAAAAAAAACACCGATTG
TAGCGAAAAAACCAGCGAAGTCAAGTTGCAACCAAACGTGAATGCAACTTTTTTAGTAAA
CGGATGTAACAAATGAAAAACCCTAGTAGCAGATTTTAACAATAGTTACAGCAAATTTAC
ACGAAAAAAATTACATGCACTGACCAACGTAGCGGTTTCCCTATACCAAACCTAATCGAG
ACGAGAGGATCGTGGAGACGTACGCCCCCGCGTGTGCAGCTCGAGTCCAAGTAGGATGCC
GCGTCACTGTCCCGGAAGCAACCTAAAACCCAATCAAGATGAGGTGCGCCGGTGCGCGTT
CGTCCCGTCGCTTATCGCCCACCAGAAACCATCCGGCTGCACTGTGCGCGATCATAGTTT
TACTCAAAGTGTTCTCCTTGATGACGAAGACAGGGTAAAGATGCCCGGGCCAGGGATGTT
CAGACAGGAACAAGAGCGTACAAATTCCAAGAGATATTCATGGCTATAATTTAGCCACAC
ACTATCACACGCTGCAATCGTGGAATTATAGGGAGGATGGCATTGTCAGGAAGATCCTGG
TCGATTTTACGCATCCGTGTGGAAGATAAATGTACAAGGTGATAAGATATGATACTTTTT
TTATATTTTGGAAAGTCCGGTTGAGTAAGCACGTCTGTGTTCGAAGTTGTGGTTATATTG
CATCAAATCTATTTTTACGTGAATTTTACTGAAGCTAGGGGGGTGAAGTGCAGTGTGCCC
GGTGTAGTACGCTGCCGCCTGTTCTCGTCTGACGTTCCAACAACATAAACTCGGGTGCAA
GTAACCCAGTTAATGCGGTTAGCCGACGTCCAACCAATGCGGTTGATGCTAGACAGGATG
TGCAGGTCATTCAGACACGAATCTTAACTGTCTTTGGGGCAAGTGCAATGGAGGAATACT
TAGGAACTCAAATCTAGCTTGCGGCCATCGTAAACGAGATGCACCTTATCCCGCTGTGCA
ATCTTTGAATTGGTCTCACGATGACCCCATGAAGAACAGAACCCTATAAGTTGAAGTGTT
CTAATCTCAGTTTCGTCAGTCACTCCATGCACAGTGAAGAAACTCTTGAATGAGTTAACC
GCCGACCGAACCAATCATCCCTACATTGTCCTTAATAAGGTCGCTACTGAAGTGACGAGA
TGATAAGGAGATTGTAACAAATGCTAGCTGTCGAGGCTGTGCCGACCTTCCAGAGGAACT
GAAGACCACACCATAGACAGGAACGGCAGATTCTAATCGCATCCTACTACTTTGCATCAT
GATTCTTGAGGCGTACTCCGATTCAACCAACAGTTCAAAGGTGCGACGATTAAGTTCTGG
CTCCTGATATTCGAGAATGTCTGTGTGAGCAGTGCTCCTGTCAAAAAGACCAATTCCTTT
GCCTGCACTCTAAAACCCAGCACAACCCAACCCTTCGTACTACATCACCAGCAAAAAGCA
CTGGCGCTAGCTAGGCAACTTTTTTTTCTCGTGTCGTCTTCCTCACAAACAAGCTTCGTT
GATCACGCTTTCAGAAAAAGTTTGGCTGATCATCAACACCTAACACTTCTCATATTTTTC
ATGACCTCGGAAATAAAGCAAAACATCGTATCTTCACCTAATTAATAAATTGCACCCCCA
CCTAGCTAGTGCTAGTTGGAAGATTATTTAGACATATGTAGGGGTAAGTAGGTGTAGGAT
GTTCCAGCTAGCGGCACCGAACCGTCCTCCATATATATAGCTTGCTCTCTCATGTTATGA
TACGAGCGCGCACCGCTCCTCCCATCTGCCAAGCATCTGCGTTGCAGACCGATCAAAGTG
TTGGGACAATGGGGGCACACTTGCTGGTGCTGCTCGGCACCTTGCTGTTGCTCCCACAGC
TGCTGCTCGCCGGCACGACGAGATACTACACCTTCAATGTGAGCATCGTGTTCGTGCACT
TTTCTTTGTCCTTGTTTTACTTGCATATGTCACTGCATTTCAACATCGATCTGAAGCAAT
AGCACATATTGCGCCTTTCAAATGCATGCATGCAAGCTCCGTTTAAAAACAAAATGCATG
CATGCCCCGTTTTAAAAAAAATGCATGCATGCCATGCATGAGTTGTCCAGTGGACACCAT
GCTGCGTGTATTTGTTCTGACAGGTAGCGCCTAATGTGTGTATTAATTTGCAGGTGACAA
TGCAGAAGGTGACACGGCTATGCACCACCCGCGCCATCCCGACGGTGAACGGCAAGTTCC
CCGGCCCGAAAATCCTCACAAGGGAAGGCGACCGTGTCGTCGTCAAGGTGGTTAACAATG
TGAAGCACAACGTTACCATCCACTGGTAAATCTTTGGCCCCTTGCTCTTACTTAATTCCA
TGGGCGATAATCGTACTGCTAGCTACATTTTCATAAACAAAGCCATGCTCAATTGCTCAT
CACAATTGAAGCCAGTTTTCTGAAGACCGGTCGGTTCTATCTTTCGGCAAAAAATTACTC
TCTCTGTACCGTGCTGTATTTGTATGGATAACTGGCGGTGATGTGATGTGAGCGCAGGCA
CGGGGTGAGGCAGCTGCGGACGGGGTGGTCGGACGGGCCGGCGTACATCACGCAGTGCCC
GATCCAGACGGGGCAGAGCTACGTGTACAACTTCACCGTGACGGGGCAGAGGGGCACGCT
GTTCTGGCACGCCCACGTCTCCTGGATGCGCGCCACGCTGTACGGCCCCATCGTCATCCT
CCCCAAGCTCGGCGTGCCGTTCCCGTTCCCAAAACCCTACAGAGACGTCCCCGTCGTCTT
CGGCGAATGGTTTAACGCGGATCCAGAGGCTATCATCGCACAGGCGCTGCAGACTGGTGG
AGGCCCAAACGTCTCCGAGGCCTACACCATCAACGGCCTTCCAGGCCCACTCTACAACTG
CTCGAGCAAAGGTACGTAACCCACAACAAGAGGCCCAATTCCTCCCATCATCATCATCAA
CACTCAAAAAAAAAAAAAGGGTTTCGGTTTTCATGTCGATTTATTTTTAGCTGATGGAAT
GAACATTTGCAGACACGTTCAAGCTGAAGGTGCAGCCAGGCATGTGGTACCTGCTCCGGC
TGATCAACGCTGCGCTCAACGATGAGCTTTTCTTCTCGATCGCCAACCACACGCTCACCG
TCGTCGACGTCGACGCCGCCTACGTGAAGCCGTTCGACACGGACGTGGTCCTGGTCACGC
CGGGGCAGACCACCAACGTGCTCCTCCTAGCCAAACCGGACGACGGCTCCCCGGCCGCCA
CGCACCTCATGCTAGCGCGCCCCTACGCCACGGGACGTGTTGGCACCTACGACAACACCA
CCGTGGCCGCCATCCTCGAGTACGCGCCGGCGGGGCACATCAAGAACCGTCCGCTCCTAT
GGCCGACGCTACCGGTGTTCAACGACACGGCGTTCGCCGCCAACTACAGCGCCAGGCTCC
GGAGCCTCGCCACCCCGGACTACCCTGCCAGAGTGCCGATGCGGGTAGACAGGCCCTTCT
TCTTCACCGTGGGGCTCGGCACCACCCCGTGCCCGACGTACCAAGGGTGCAACGGCCCTA
CCAACGACACCAAGTTCTCGGCGTCCATGAACAACGTGTCCTTCAACATGCCCACGACGG
CGCTCCTGAAGGCGCACTACGACGGCAACACAGCCGGCGTGTACACGTCAGACTTCCCCG
CCACGCCGTCGGAGCCGTTCAACTACACCGGCACGCCGCCAAACAACACGAACGTGTCGA
ACGGGACCAAGGTAGCTGTGCTGCCGTACAACACGAGCGTGGAGGTGGTGCTGCAGGACA
CGAGCATCCAGGGCGCCGAGAGCCACCCGCTGCACCTGCACGGGTACGACTTCTTTGTTG
TGGGGCAAGGCGTCGGCAACTACGACCCGTCCAGCCATCCCGCCGGGTTCAACCTGCTCG
ATCCAGTGCAGAGGAACACCGTCGGCGTCCCCGCCGGAGGCTGGGTCGCCATCAGGTTCT
TCGCTGATAACCCGGGTAAGTTCATACTCCACTTGGCATGGCAAAACTGCACAAAGCATA
TCACCAGTGCTACTGACGAACTTGAAATGGAGTTGATTAATTCACTCTTTTCCTTGCATG
ACGGTGCAGGTGTATGGTTCATGCATTGCCACCTTGAGGTGCACACCAGCTGGGGCCTGA
AGATGGCATGGGTGGTCAATGATGGTCCGTTGCCTGACCAGAAGCTCATGCCTCCGCCGT
CCGATCTTCCCAAATGTTAGGGACCGGCTGTGGACCTTGACCGACATTGCTATTCATTTC
TTTCGTTTGGTTTGCGTATATACAGTGGTGGATGAATTACTGCACATACAGAAGCACAAA
AAAGATGTACTAGTACTCAATCTCCCCAACCACAATTATTTAGATATAGAGGAAATATGT
ATTTTCCCATTATCATTCTTTCCAGTATTAATCAACATATTGCCACTTGCTTTACTTGCT
TTTATTTGGTATCATTTGGAAACTTTTGTTTGAAACGCGAATGGTTGATACGAATACGAT
GGTTGGGCATAAATCGACGAGTTGCTACGTTTAGGATAAGAACAGTCGTGAGAACTCCAA
TTGCAGAGGGACCAGAGCAATATTAGTCGATGTCAGCAATACGCGGCCGGTCTGCCCCTG
CCGGGACATACTGGATACCGTACATGATCTCCTCGGTGCGCTTCACCGTGTAGTCCCTCT
CTCGCGAGCCATGTCGTCCGACCAAGTGACGGGGACCGATCCAACATGAGCACGTACACG
TCACGCGGAATCGCTCCCACGTGCCAACTCGTGGCCTCCGTTTCTGTCTGTCTCGAAGTT
GACACGCTCCTGTACGTGTGCCGCCGCCATTGCTCTCCTGTTGATCAGAGTTCGAGCCCG
CGATAGCCATGGCCCGTGTGAAATACGCGCAGGTGCGTGGGCCGGGTTTTGTGTTGATCG
CCTATAGCTATCATCACTGCGCCGTTTCTCTCTCTAGATCAGTTCCGGCTGGCCGTCGAT
TTCCATGGATAGTGGCACAGTGCATGATTCATGACAGGCTGCGCGCCTGTCTGTGCGCCA
ACAGTGCCCTCGGCCGCGCTTTGGGTTCTGCTGGTAACACTAAATAAGTTCCTGTCATCG
ACCACTGCTTAAATGCAAAGATGGATGAAAGTGTCGGGGTGGAATGACTCTGACTCGGTG
AGTGGGGATTGTTTGTTGTCTTGAGAGGAGAAACTGGTGAGTTCAGAGCATTTGCAATTT
TGCATTGTGTACGTGATTCCTGATACTGATAGGCCCAGTCATGGAGTCATCGGGAGGTTG
TAGGGTGGGTAGCATATTCCATCGGCCTTTTTTTCTCGAGAAGCGCGACGGGATAAGACT
ACACTGACGTGCAAACCTACGACGAGGAAGCAGGTTCGATCTGGACAGAGCAGACGGCAT
GGCCGCGCCGGGAAACGCCGTGGTGGCATGCAGGCTCGCCATGCCGCCGTGATAAGGACT
GGAGGAGGCCCCCTCTCGCGCGAGCCGAACCCACGTTCTTTTTTTCTCGGCGACAATGTA
GTTACGGCCCACTTGTGCATCCATTCTCAATTTCTTATCGGCCCAATACGGTGAACCCAT
CATCCATTTGCATTTCTACCCTTGTATCAATTTTTTTTTTTTGCATTTCTACTCATGTGG
GCATGCCCAAAAAGAGGACCGACCTATGCTGCTGCGGCGTGCGGAAAAAGTACGCAAAAT
TCAACCGAGCCGCGCGCACGGGCGGGCCGCGTGTTACGCGGTTGCACGTGGGCATCACGG
GCAGGGCAACGGCCGGGCGTGCCGCCTCGCGCGCCCGTCCACACGTCGAGTCAAAGCACT
CAGCAAACGAATCGGACACAGAGCACCGGCGCTGCACGGCTGCGCCGAACCGAACAAAAG
AACCGAACCGGAACCACATGATGATGGAAAAAAAGATGAAACATGGCTGTGAATCCCTAA
ATACTCCGTGTGGACGGTGAATTTATTTATATACCTCAATAAACTGCGTGAAAGTCCGTC
AGAACGGATCCAATCCCATTGGACTTTACTTTTCGAAAACGCCGATTGGATGGGGACGAA
ATGAACAGACGGCCGGCGGGTGGTTGTGGGGCTGCATCACCAGGAGACGTGTGCATTATA
TCCTCTGCTAGCCCCCTTGTAAAAACACGAGGCAACACAGCCAGGCCCCGCTTCAGAGCC
CATCTGACTCAGCCCAGGTTGGAGTGCGAGTCCATCACGTATATAAAATCGAACGAAGTT
CTTAAATAAATCATATATGCGTCATTCGTCACAGTTTTTGTGATATTTTTTCCCACACTC
TGTCTAGATGTGATATACTACTATATTCAAGTAAAATCAATGATATAAAACTTAAATATG
TAATATTTAAGTCATGTCTAAATGTAATTTAGCAAACCCGTTTTTCCCACGCACATGAAG
GGAAAAAAGTACGAAAAAGCGCAAGCAGCAATCTCACTCAAAACAACATGTCTCTTCAAT
CGTGTGTCCAGATCATGCTTTAAAATTAGATCCATGCTAATAGGTTTCGATAAACTTTTT
TGATGCAAAAATCTTGCTTTTAAATTGTACTAAGTTGTCAACCAATATGTGATTGGGTGG
TTGGGTCGACAGCGGTATCCTCTGCGTATCAAAGTTTAAGTAACTGACTTGATATTGATG
TTTATATTTTTCTGAATTTATTGCATGCCTTTCAACAATATGCGTTGAATGAGGGAGATA
TTTTCGTCGACTATGAAAGCGTTTGTGATGACTTCATCAATTTTAAGATGATGTGTCATT
AATCTTAAAATAATATATTGGTTCACTTTCTCGAAGATGTTTATAGGAACATAGCGTATG
TGCATGTGTTCATAGGCATGAGTATATATTCGTATACGTAAGCGACTTCCATTGTACTGT
GGTCAAAAAATTGTACTAAGTCGTGCTCCCAAGTGAAACTAACTAGTCCTCCCACGAGGA
AGCACACACATTTTTTGTGTTCTTTTTCTTTAACCCACTTTGAATAAAATGATTGTTGGA
TACTTTTTCCTACAATTTTTCTCATTTTCTGTATTTGAAAAATTGTTTTGTGTGTGTTCT
AATTTTTTTAGTGTGTATTAGAAATGTTCAATATGTATGAAAAATAGATCATCGTATGAT
AAATAGTTCAATTTACATGAAAAATGTTTACCTTTTGTTCAAACTAGTACACCACAAGTT
AAGAAAATGTTCATTTTCTTTTCTACTCCTAGAGGGGCAGTCTGCCGTCGTGATGATAGG
TTCGTTCCACCTCGATAACATTGGTTTATTTTCGATCGTTTTTTTTCCGTCCCGGCTCTT
ACCATCCCCTCTCATTGGTTTATTTTTGCCTCACCTCTCCCACAAAGATTTTTTTTATCT
AAACAGATCAGAACACTCCATGTAGGTGCAAGTTACTTAGTAATATCTTTATATGGAAGA
ATCAATAATGGCTAATCTCTAAAGACCAAATCTAAATTAATTAATCTTGCCATAAGTCAC
TCAATTAGATCAATTACAATTTTCATACATCACCAAAATTACACACCCTCTAACTTTTTG
GTGCGTCGCTCCTCCTCCCCCTAGTCCCTCTCAAGGAAGGAAATCAATAGGAAATCCTTC
CTTCCAAGTGAAGCACGTCTTGACCAAGAAATAAATCGGGTAACAATCCCCTCTGATATG
ATCGATTAACTGCAGATGGACGTTCCTAGAGAGAAGAAAGGGGTAAAGCATCATCTCCTG
CTAGATCACACCACACCTCTTTCCATGTCGTGTCTCCCGCGTCAGCGCACAATGTGTCGC
TATGGTTGTCGTCGTGCATGCCACCACCCGCGTCATCCATGGAGCCCCTACATCTTCAAC
ATCGTCAGATATCTCTACTCATAAAAGGGAAGTTGGTAGCCTGGTAACATGTTTATTTTC
GTTCGATTTTTTTGTCCCGCCACCACCATCCCTTCTAGCGACTTGTTTCGTTTCTTACTC
GATTGGTCCCTCAATTTTTTCAGTCAACCCCACCATTTTTTTATTCGGGCGCCTTTATCT
CCCACGATCTCACGACTCTCACCTCTTTAACATTGGCTTATTTTCGTTCGGTTTATTTTC
GTTCCACCTCCCACCATCCCCTTTCATTGGTTTATTTTTGCCTCACCTCTCACCATACAT
GAAAACAAAACCAAAGATTCATAATATTAATATGGAAACAAACCCAAAAAATCAGCACCA
TCGTAACCTTCCTCCTACCCTCACAACATCAAAGTCATACATGGAAACAAATCCAAAGAT
TCCTAATATTATTATGGGAAAACCCCTAAAAAATCAGTACCATCATAGCCTTCCATCCAC
CCTTGCAGCGTGAGTATGTACTAAAATTAATTAGCATCCGTTCCACCCTCATAAGTGCAA
AAGTACTATACATAGGAAACAAACCATAGAATCTTAACAATAATTAGACTAATTATTGTT
GGAAATGCCCAAGAGGCAATAATAAAATGGNNNNNNNNNNNTTTCCTTGTTCATGATAAT
CGTGTGTTGTTCATGCTATAATTGTATTAA