Contig Data
morexGenes
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Map Locations of contig_157691 (5299 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_157691

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17499 1 1880 bp MLOC_17499.1 Available Available LOC_Os02g49920.1, FRAME:+1, EVALUE:0.0, 13102.m05669 protein 3-ketoacyl-CoA synthase, putative, expressed





CDS Structure of MLOC_17499






Contig Sequence (5299 bp)

>contig_157691 5299 assembly3_WGSMorex_rbca.fasta
TTCTGGTTACGTTTGTTGGACGGAAGGTATTGATTAGATTGATATTGTGTCGTATCCATA
CTATAAATACGTATCAACTGATTAGGGTATTTTAAGCAGCTTTAAGATGTGTGCAAACAA
TGACGTGTCAAAATCTGAAGAGGGGCTTGAGACCCGGCACTATGAGGCCCCGTCCCATAG
AATTTTCTTCCCCTCTAACCACTTCTATAGTGTGATCTCTTCTCGGAGCGACAGGCTCGG
GCTCCACCTGCGGGGTCCCGGTACCCGGAGTTTCGCTTCTTTAAATTCTCCCTCCCGGCT
TTCTCCTCGCCTCCCACCGCGAGCCAAGCGACACACACACCCACGAGGCCACAGAGCTAC
AGCTGCTCCCAACACAGACGCGAGCGCACGCAAACGATACAGAGCGCACCGTTAGCATGA
GCTCGTCGGCGCAGCTCAAGCGGCTGTACCAGCTGGCGGTGAGCAACATCGTGGCCATCG
TGGCAGTGCCCTTCGCCGCCTCGGCCCTGCTCAAGGCGGCGGAGCTAGGGCCCGATGAGC
TGCTCGCCCGGCTGCGCGCGCTCCGGCCCGTGCACATGTTCCTCGCCGCGTTCGTCCCGT
CCGCGGCGGCCGCCGTCTACCTCAAGCTCCGGCCGCGCGCGGTGTACATGGTGGACTACG
CGTGCTTCCGCACCAGCCCCAGCTGCCGCGTCCCGTTCGCCGCGTTCGAGGAGCACGCCC
GCGTGTGGCCGGGCTTCGACGAGCGCAGCGTGCGCTTCATGTCGCGCTTGCTCGAGCGCT
CGGGGCTCGGGGAGGAGACCTGCCTCCCCTACGCGCAGCACTACATCCCGCCGTCCTGCG
ACCTCGAGTCCTCCCGCGCCGAGGCCGAGCTCATCGTCTTCTCCGCCATCGACGACCTGC
TCGCCAAGACCAAGGTCGCCCCGGTGGACATCGACATCCTCGTCGTCAACTGCAGCCTCT
TCGCGCCAACGCCGTCTTTCGCCGACATGATCGTCAACCGGTACAACCTGCGCAAGGACG
TGCGCAACGTGCACCTCGCCGGGATGGGGTGCAGCGCCGGTCTCATCTCCGTGGGGCTCG
CCCGGAACCTGCTGCAGGTCGCTCCCAGGGGCTCGAACGCGCTGGTGGTGTCGACGGAGA
CCATCACGCCCAACTACTACATGGGCAAGGAGCGCGCCATGCTCCTGCCCAACTGCCTCT
TCCGCATGGGCGGCGCCGCCGTGCTCCTCTCCACCAACGGCGCCAACGCGCGGTTCCGGC
TGGCGCGGGTGGTGCGGACGCTGACCGGGTCCCAGGACGGCGCGTACCGCTGCGTGTACC
AGGAGGAGGACGAGCGCGGCAACGTGGGGATAAACCTGTCCAAGGACCTGATGAGCGTCG
CCGGCGAGGCGCTGAAGGCGAACATCACGGCCATGGGGCCCCTGGTGCTGCCGGCGTCGG
AGCAGCTGCTGTTCGCGCTGTCCTTCATCGCGCGCAGGGTGGTGAACCGCGGGATCAAGC
CGTACATCCCGGACTTCCGCACGGCGTTCGAGCACTTCTGCATCCACGCGGGCGGGCGGG
CGGTGATCGACGAGCTGCAGCGCAGCCTGACGCTGTCGGACGAGCAGGTGGAGGCGTCGC
GGATGACGCTGCACCGGTTCGGCAACACGTCGAGCAGCTCGCTGTGGTACGAGCTGGCGT
ACGTGGAGGCCAAGGGGCGCATGCGCAAGGGCGACCGCGTGTGGATGATCGGCTTCGGCT
CCGGGTTCAAGTGCAACAGCGCCGCCTGGGAGTGCATCCGCCCGCCCGCGGCGCCCGGCG
GCGCCGACGGGCCCTGGGCCGCCTGCGTCCACCGCTACCCCGTCGACATCCCCGACGTGC
TCAAGCACTAGCCACTAGCTCGTCGATCTCGTGCACATTCGTACACACACGTTCGCTCCT
ACACAGGAAAGTCTACACAGTAGCCACTACTAGGCAGTAGCACACTAGTAATACTACCAA
CGATCGATCCGTGCTCTGTACGTAGTAACTATTCATTGCTGCATGCCTGCATGCATCCAG
TGAGCGACTCCATCTCTTTTCTCTCTCTCTCTCTCTCTCTCTCTGCACGTTGCTTCGCAT
TGATGTATGCTTCTCCCTTTTACTTCTCCTCCCCTACCGCCCTACGTGATCCTTCGCACC
AAACGTTTTAACTGATGAGAAGACGTGAGGTCCCGACGGGCGACGGTAGGGTTGGTGCAT
GCATGCGCCGGCGGCCGGAAGCTGGTAGGGTTTGCATTGTTGGCTGCACTGAGCTCATCG
CCGGTTCGCCGCCGTGGTCTACTGGCTCCATCGACCGGGATCGTGCTTCTGCGCCGCGGC
ACGTGCGAGCTGGTTTGGTTGCTTTGATCACGTGCCCTGTCTGTTAACACTCGTTAGTCG
TTACGTAGCGCACGCTCAATTGGCGTGATGATGAGTGTCGTGCACACAAGCCCCTCGTTT
TTCCTTTTGGCCGTTCGATGATGTCCTACGAGTTAATGAAAAGCAGAGAGCTGGGTCGAC
TCAGTCAGTGCCCTACCGACCTACCACCCTGCTCCATCAATTCATCTCTGCGCGCCGCGG
TGACGGACGGGCAGTCACTCACTCACTCACCGGATGGTTCAGACTGCTGGCTGTCTGAAC
CCGCCGCTTCGGCGCTTTCTGTGCAGTCAGGGCCTGACATGCCACCCCGGTTCAATTTAA
TTTAATTCAGTCCCTGCACGCGCAGTCCTGTCCCGCCGCTGGCGTAAATTTATGGCCTGA
CACGGCCGCCCTCCCGCTCATCCAGTCCTCTGCTCATCCAGTCCTCTCCATGCATGCATG
CATGCATGCGCGAGACGCGCCAACAGCGCCAACGGCCGGAGGCGTACGTACGTGTCGCTG
CGACTGCGAGTCCAATCAATGCCGGCTAGCCGATGCGCCGTGCGTATCGGCAAGCCCTGC
CCAACGGCCTCGTGCCGCCGGAAGCGCGCGCATGCCATCGGCGTCGGCAAAGGGTGGCAT
GTCGCCGTCCCCGCCGCGTGCCCGGTCCAGCTCGGCCTTCTGCCGCGCCGCCGCGCCGCC
CCGTCCGCGTCCAGGGCCCCTCCGCGCGCCGGAGCGGCATGAATGTGCAGTTGCATTGGC
CCAACCGCGGCCACCACAGTCACTCACCGGACCCGCGGCAGTGCGGCTAGCCAGCCGAGG
AGTAAATGGCCGAAATCTACTGCTCGGTTGGACGAGCACGGGGAAACATTGGCATTGGGC
ACCAACCGCCGGTTGGTTGCTATCCTCTGCCTGTTCGCAGGGAGAAGAGAGAGGGGAGCC
ACATCCGGCGATCTCCTACCCGAAAGGAGATGCTTCAGTACGAGACAGCGTTGCGATCTG
GCTGCCGAGGAAAAGAGCAGACACGCCAAACATCGGAAACCATGGCCTCCTTCCGGCTAT
CAGGAGTTCCGTTTGTACACTGACCTGAACATATGCATGCCTGATAATCTCTGCCAGCAC
ATGCAGATGAGCCAACCGCTTCCTTGACTGCATATGCGCTCGTTCTCTTTTTGTCTCTTG
CCAAATATGCAGATGTAGCAATGGCGATAGATGCATTGCTGCATGGATATATATATGTGC
TATGTGGGGGTGGGGATACATCATAAATCTACAGAACAGATCAGCAAATTTGGCTCCTTA
AGAAAGGCTGGCGGATGTTGATCTGAACATACGCATAGCATATCACCAATACCGCTGTGG
TGCAAACATTGCCGACCATGAGGAGGCGTCCACGTGGTCACAAAAACTCTCTCTCAAAAA
AAGGTTGGTGATTCATATTCCACTCGGTACACATTGCTCTGATTACAGGTTGAACTGACA
GCTAAATTGCAGGTTTAATTGACGTGCATCTAGAATCCGAAATGCATGCGCGTAGTTAAG
TGGCGCGCATGCACTGCCTTTGACATGCTGGCACTGGCAAGCTATTCCCTCTGCCGAACA
CTGACCCGTGCTGCGAGGAAAGTTTTTTTTTTTAGACAATGTTGCTAGCTGAAGTGATAC
GTGGGCTGGGCCACACTACACTACTTCTGGGCTCTGCTCGCCTGGATCTTGCTCGTGGAC
CGACTGCTGTGGTTTACAACTTTGCCATGGCGGTGTAACGCCCTCGGATTCTCAAAAAAA
AAAAAAAACTTCGGATTATTTTTCTAGCTTTCCAGAACGAACTGCATGTGTACGAATTGC
CATGTTGGACCACCGGGACATTATGACACCAACAGAACTTACATGTACGAATGAACTTTT
TCTCCCTATCTCAAAAAAAAAAATTAACTTTTCCTCACCACAGCTATAACTTCATGGAAA
ATAATCTATGGGGTTTTAACACAACACCCTCTTTGGAACAGAACGATTTTTAACAACAAC
AAAAATAGAGGATTCTAAACTGAATTACAACCAGCCACTTATATTTTGGGCAGTGCTCTG
CGCCGGCGCGCCGGCAGAAATTTTCAGCCGGCCGCGCGCGGACCGCACGATCCACCAACC
TCGCGTGTCCGCAGCGTTCGATCTCCCATTTTTTCCCTCGATGCATCAAAAATTCGACGC
GATGCAGCACTTTTTTAGACGGTTGCAACAAAAACAAAATTTGTAGCAAAAATAATATCT
ATGTGATCATAGCAAAAAAACAAAGCTGATGGTACGTGGTAGCAAAAGTCAAACGCCGAT
TGTAACAAATATCTACGTGAACGTGTATGCAACTTTTTTAGTGAACAGTCGCAGCAAAAA
ATGATGTCGGTTGTAGCAANNNNNNNNNCGGTTGTAGCAAAAGTAAAAAACATTGATTGT
AACGAAAAATCCGACGAACTGAAGTTGCAACCAAATGTATATGCAATTTTTTTACTGGAC
AAATGTAGCAAATAAAAATGCTTGCAGCAAATATGACGCTGGTTGCAACATTTTAGACGG
AAAAATGTTGCATGCCCAGTCAGTGCTCAGCGCGTGGGTCGCGTGCGGCTGGCCGAATGG
TTCGGCCGATGCACCGGCCAAAAACGTTTCCCTTATATTTTTATCCTTAGTGGGAATAAC
ACACTACATGTATTTTCCCTATTTTTGTCACTCAGACAAGGTTACACCCAACTAACATAA
ACAACTCTCTCTTACAGATCATTCATCCAAACATGGCCACTGCAAAGCTAATAGATCGAT
GAGCATATATGTCCATAAATCATGTGTCGTGGTAAAGATTCCGACAATAGAAAGGGGGTA
GNNNNNNNNNNNNNNNNNNNNNNAGATGCACATGGGTGACATGGTGGTTTTACCGAGTTC
AGGCCTCTCACAGTGGAGA