Contig Data
morexGenes
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Map Locations of contig_1576759 (5130 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1576759

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17457 2 2784 bp MLOC_17457.1 Available Available LOC_Os02g20410.1, FRAME:-2, EVALUE:0.0, 13102.m02285 protein GTP binding protein, putative, expressed





CDS Structure of MLOC_17457






Contig Sequence (5130 bp)

>contig_1576759 5130 assembly3_WGSMorex_rbca.fasta
GCTCGACTCCGGTGAGCTTAATTTTGTGGAGTGCGGTAGGATAGCTAGTAGCTCTAGTGA
GCTCCAGTAGATGTGATTTACCTCTGCCCCCCTCTAATAAGTGATAGTAAGTGATGCAGT
CTGAATGTGGTTCCAATTTCAACCGCGAATGTTTTTATTTCTAATTATGCAGTTTGATTA
TACGGGTTCTATTCTGCAACCCAACATTTCGTCCCGCAAAACCCCACTTCATCGAACTGT
AAAACACGTTTGCAGGTCGCAATTATACAAGGTCTGCTAAATGCTCTAAGGGTTGAAATC
TGCATCCGCAGAAGCCTTTGGACCTGCAGGGCGGGTGGGAACATTTCAAGCAAATGAAGA
AAGCAAAGCTCGACACTGCGAGAACTGATGGCTGGGCTCTCAACGCTGTGAACAGAGATT
GTCACAAGGGGAGATGCATTGCTGAAAAACAAGGCTCAGGAAAGTTTCATGCAAGCGAAA
GAAGAAAGCAAATCGCACATGGTCCTGAAGAACAAAGTCCACAAACCAAGTCCCACACCA
AGTTACATATCCTGTTTTACATTCTGACCTAAAACGTGTCACCAGCACACGACGCTGCAC
GAAATCTAGAATTAGCACACGAGGAGTTAAAATGCTGTTACATATTGTGGAGGAAGAAGC
AGTCAAGCGCCGCCAACGATGTGCTTCTCATACAAGGCGACAATGTCCTTCTTGTTGGGG
TTCTTCAGCTGCAGCAGCTGGGCGCCGAACCCTTGCTTGGTCAGCTCCTGCTTCAGCTTC
AGCACCGTGAACTTGGTGTAGTCCTCAGTCTCCGTCTCTGTCCCCTCCAGCTGCTGGCTC
CCGTTGTTGGTGTCCTCTCCGAAGAACACGGATCCACCATCCTCCGTGTGATTGTTCTTG
AACGGGCTCGTTGTGCTCTTCGATCTTTTCCTTCGCCTCCCAGTGTCGTCATCATCGACG
TCCATGTAATGGACTGACTCGGTGGCTTCACCCCTCGCACGCCTAGAGTATGAGGCCTTG
ACCTTGCTGTCAAGCGCAGTTTCATTGAGCCGAACAGAGGTGAGCTCCTGCTGGAGCATG
TCCAGCTTGCCTTGTGTTGATTGCAGCTGCAGTGACAGGGACTCGGCTCTCTTGTTGGCT
TCAGCACAAGCTTCACGCTCTGTTGCCAGTAGACTCTCGAGCACTTGGACCGTGTTGGAT
CTTTGCTGGTTGTTCTGTTCCAACATCTCCCCAATCTGTTTTTCCCTCTCGTCAACCCTT
TCGTCAAGCATTCTGACCTTGGATAGAGCATCCAACTCAGACTGATGAAGTCGCTCCATT
TCTTCCACCATCTTACTTTTCTCTCGCTCTAGAGTTTCAACCTGTCTCTCCATTCTTTCT
ATCAAAGTGAGTCTCTCCATTGCTAGTCGCTGTGCTTCACCCTTGTCTCTCTGAGCAGCA
GCAGCTTCTACACGAGCTAAATCAGCCAACTCTACTGCTCGTTTAGCCTCCCTTTCAGCA
TCCTTGCACCTCATGTCTGCCTCGTCAAACTTTTTGCACTCAGATAGGAACTTCTCCTGA
AGATGGTTCTTTTCTTGTTCCAGGATCCCCACTTCCTTCTCACGTGACTGAGCTTCAGTT
TTAATAGACTCCAAGTTATCAGTCAATAATCTGATTTCTTCCTTCAGAGCCACCGAATCT
GACTCATGGTTCTTCAACTTTGCTTCAGTAACCTGGATTTGGTCATCATTAGACATGAGA
TGTTATATCACATTTGAGGGTGGGAAAGGAGGGATGGAGGGAGAGAGGGGGGTACCTCAA
GCCTAGACATCAAACTTGTCTTGTGAACTTCAGTTTTGTTGATTTTTGCATTCAATGTAG
ATATCAGTTCTTCCTGTTGATAGAACAAGAAACCAAAAAGGTAAACAACCAGGCACCCAC
ACATCTACGAAGACTTAAAAGGTAAAATGTCGAGTGCAAGAGAAAGGTTTACCTTCTCGT
GCAGCTGGGTAGCAAGTTCCGCCCTCAATGCATCTTCCCTTTCTTGCACTTTCTTATTTG
TGCGTTCCTGTGCTGAAGCTGCTCTCTCAAGAGCTGTTTTGGCCTCATTGGCAGCATATT
CATATTTACGTTTCCACTCAGAAGCTTCCTCTTGAGCAGATTCAGCCTGCTCTCGTACAG
CAGATAATCTGCCTTCACTAATGCTTACCCTAGATTCCAGAGAAGCAATCAGGGATTTTA
ACTTGCTTTCATCTGCCTTCTGCTGTGAAATGCAGTGATCGTATTTGCTCTTCCAATCAG
CACATTCGCGTTTTGCTTGTTCAAGAGCTGAAGACAAGCTCTTACAGCGTTCATCCAACT
TGCTAACCTTGTTTTGAAGTTCAGCTATTCGAACAGAGTAGTCCTTTGACATCTTCTGCT
TATCATTGATAGTTTCCTCATAGCGCCTTAAATACTCAGCTCTGTGCCCTTCACTTGCCT
CTAGTTGCTTCCTGAGCAATGATAACTTATCATCGCTTGAACTGCATTTCAATCTCAGGG
CATTCCTTTCAGCATCGATATGCTCCAATTGTTTTCTGAAAAGGTCTAGCATTGGGCCCG
CCAAACTGCAGCAATTCATTGGCATATGATGAAATTTAAGTGAATACAGAAGCAAATGAA
GTAAATGAGGACCATGGTTAAGACGTTCAGCAAAACAGATACTGTAGAGATGGTAACAGA
GGATCGATTTGGTTCCTACAAGTATATCATGCAGCTAAGGTTGCAAGTGGAGTGTCCACT
AAGCCCACACTTAATGAAGTAGATAGTACAATGTAAACTAGCCCAGCAAATACAAGCTAT
AACTGATTTGAGCAGTTTTGAATAGGAAACAGGCAAAAATGTGCGCCGCTTGTATCCCTA
CATGCAGCCAACTTGAACCGTGTAGCTTCAAAGTTATATTATCAAGTTCAAAGTGCAAAT
TATGATCTATCATGTCCCAAAATGAGAACATTACGAAAAATGATGAGGTGCCTACCACTG
ATGCAGAAATGTAACAAGCTTTGTCCATTTCTTCGGCCCATAAGAAGTCGCCTCATACTC
CATGAGGAGGCCATCGAGGAGCTGCATTATATCAAACATAATTGTGTTAGTATTATTAAA
TTTTAAGCCAAAATGAATACAGCATTCCAAAGATTTGCATCTCAGGGAAAAGCTTAAAAT
AGTCTTACCCTGACTACATCATCCAACTTTGAATCAGGACGGTTACATGCTGCCCGCACT
TTTGACTCCATGCTCTGTATTTTATTTGAACATTGCAAGTCGGCCTCCAGAAAAGCATTC
CTTTTAAAATCCTGCATTCATAGCATTACCATTTATCTGCTGGCACACTTTGGTACTGAT
GTACTCCCTCTGATTCACAATATAAGTAGTGCACATATTACGAAAAACCACTTAGGTCAT
AAATTTATCAAACAAACATAATCATATATTATGATATTATTTGCATTGGTAATTCTTTTT
TACATCAATGATCAAGCCTAAAACTCTATGAATGGCAGAACTTCTAAAACACTCATATTA
TGAATTAGATGGAGTGATTTAACAGCAAGCACCCATGGATTGATTGAACTTGATTAGAAA
GACAAGTAATAGCAGGCATAGTCAACTGAAGTAGTAGATGAGGAGCAGCAGTCACCTCAA
ATCTCTTCCTTAGAGTAGTCTGAAGAAGCTTTTCGAATTTAGAACGAGCTGACCCAGCAC
CAAAAGCAGAGGCATTAAAAACACTAATGGCCTTGTTCACTGCACGTTCATGTGCTTCTC
GCAAAGCATCCTGCCAAAACCGACCTATCAGAACCTCCCAAAAAAGCGGAAGGAGAAATG
CATCTTGCTTATTAGCAATGCCTACCTCTTCTGCTGGCTTTTTGCAGTCAAAAGAAGAAT
TGTAAGTATCCACAGCAGAATCATATGCTCTACGACATTCGGCTTCCTCCACACTCTGCA
TAACAAAAAACTATGAGACAGCTCCTCCACAACAAAAATAAGATATCGAAATCATGATAA
AACAGTAGAGATACAGTAACAAAAGAGCAGTGAATCAGTAACCCCACCCCTCAAAAAACG
AATGACTGTAGTTGCTCACCAGACCAGTTTTGTCACCTCATATCACTACATATCATTTCT
CTAAAATGTTCATAACGAATAACTGTAGTTGCTCACCACAGCATTTTTGTCACCTCATAT
CACTGCACAGTGTCATTTCTCTAAAATGTTCATAAAGTCCTTTCATCCGCTGCCTCAATA
TACTTTAAGTCAGTTCTCTAAACAGTTCATATCTTACCTTCTTCCTCCACTGAGCAATTA
TGTAAGTTAAGTGATAAATTCACAGCATGCCATCCATAACATCCATTCACTAAGGGATAT
TTATAACGACATAAAAATCTAGCAGATATAAAGCACACACCATTTGCTACAAATATTACC
TTCTGCAAATGAGCTCTACAACAGTTTAAACTCTTTAAATGCTTATGGATTGGAATGGAC
TAAAAAGGTAGAAAGCAATTTAAATGAATATAATGCAGAACAGGTATGTTCTTCAATAGC
ATGGTCGTAATTAAATTGCAAGCAATGCCAACAGTTGGTTGTGCGATTTATACATAAGAC
ATAAATCATAATGCCGTCATCAATTTGGGCATACCTGCCATGACGAAGATATTGTCGGGA
CTGCACCAGTATTAATCGCATCAAGAAATGATTGTGTCAATCCAGCAAGGATGGGGCCTG
TCATGGTACTAGCTCCAAGTTGTTTAGGTCTTGTTCGATCGAACACAAATTTTGTGAAAG
CATCCAGGCCAGATGTAAACTCTGGACGAAATGTATTCATCTGCAAACAAGAGACAAACT
AAGCAGACAAAAAAATAGTACAGAAATGAAAGCATTCGTCAAGAACAAAAAATTGGTTTT
TTGGCATCCAGCTGTCGGTACAAATTTTAATTAACTTTGTTGCCCTGTACTTCTAACTTA
GCCTAGATTAGCTTAGATTTAGCTATAGCTTCAGTTTTCATTTGTACAATTGTAAGAAAA
AATATACTCCCTCCGTTCCTANNNNNNNNNNNNNTTAGAGATTTCACTATAAACTACATA
GTGATGTATGTAGTCATATTTTGGGATGTA