Map Locations of contig_1576527 (3554 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1576527

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17377 2 1408 bp MLOC_17377.2 Available Available LOC_Os05g43820.3, FRAME:-1, EVALUE:3e-135, 13105.m10320 protein ras-related protein, putative, expressed





CDS Structure of MLOC_17377






Contig Sequence (3554 bp)

>contig_1576527 3554 assembly3_WGSMorex_rbca.fasta
GTACCACCTAGCTAGGTGGGGGCAGACTACCAGGAAGAGGGAATATGGGGGTTCGGGGAT
CCCCAATTTGAAAGAGTTCAATATGGCCTTGTTGGCCTCGTGGGGGAGACATTTTCTAGA
TGAGTCTCAGAGGGATTGGAAGAAAATTATTAAGTACAAATACATGCTTAACTCAACTAA
CATTGTGTGGAGTGGGGGTAATAATGGTTCGGCATTCTGGAAGAGCATCACCTGGGCTCT
AGGTGGAGCAAAAGTTTTTACAAATTAATGGAAGTTAGGAAATGGTGAATCTATTAAATT
TTGAGAGAATATTTGGGCTGGGGATTATTTCCTGAAAACTCAATTTTGGGGATTGTATGA
AATTTGTAATCAGATTGACTACACAGTAGCCCAGGGGTGGGATGGTAATTCCCTGAGACA
TTCAGAAGGTGTGTGGGTCTGGATGTTAGAACCAAAGGGGATTTACACAGTCAAGTCTTG
TTATAACCAAATTAATTTTGGGGGTGTGGTTTCTACTACTAGAGACAGTCTTTGGAAAGT
GACTTGTCCTCAAAAGATTCATGTATTTCTTCGGTTATGTGTTCTTAATAAGGTTTTGAC
TAAAGATAATCTGGAAAAACGCATACCTGTTGAGGATGGTAATGGCTGTCAAAGACTTGT
GTTGCTTCATTTTAATAAAATGGGGCAGGGGGAAAAACCCTTTCGTTCAAAAAAAAAACT
GTCGGACTTGGGGGCGAAACGATGATCCAGGCAGCCAGCTTGGGGAAAAAGTAGCTTGGT
TAAGAGCATAAACTTTTATAGCTTCTCTCTATCTAGCTGTTCCAGAGAACATTGCTTACA
TAACATTACAGATTACACCAATCCTAATAGTCGATCCCAGAGCCTGACGCTCTAGGTTTG
GAAATAGATACCAAAACACAGCAACATAGTAGCTAAACAGAACAGATGCACCAGAAAGAA
ACCCTTGCTATGTCAGCAAATCCACTTGCTACTACACCATGCTTCATCTCCATAGTCAGT
CCAGGCCTCCATGGTGCTAATTCAAGCAGCGCACGTACTCCCGCAGATCAAGTGCCTGTG
GTGCAATTAAACAAAACCATAAGTATTCATTGTATCAAGTAAGAACACGACGAGCAGTGA
GCAAGATCTCATGAAGCATTGGAGCAAACATGAAGAACAGTTTTCGCCCAAAGTGTAGTG
GTGATAAGAAGTGGGTGCTTACTTGATGGAGCATCCAGAGCTTCGCCTGGTTTTCTTCCT
GGCGGACATCACCTCCCTTCTCCTCGGCGGCTGGAGGACCACCTTTATGGCGGTGTCAAA
CACAGCCTTGACGTTCTGGCACGGCCAACGGAATCACCAAGTCACTATCTTTCGGATTGT
GAAGGGCACAGTGGTCTACCTTAAAATTGACCGGACAACAAACTCTTGCAGCCTTGACTG
TACCTGCTGTGTCTTGGAGCTGCACTCGATGTAAGCCGCGGCGCCGATCTGCTTCCTAAG
TTCTTCACCCTGAACAATAACAATGGTGAGGAAGATTATGGCACCATTAGTCACCCGTAT
ATGCTCCTGATTGACTGTTGGAAAGAAGATGGGGAAGAGGGGGGCAAACCTGTGCAGTTG
TGATTGCTGAAGCACCGGGGTGGTCGGCGAGGTAGGCTCTGTGGTCACGCAGATCTGAAC
AACGGAAACGCCATTAACTATGGGGACAAGCATTCAGAGCAACCCGTGGGCGTTGCGGAA
ACTTGATGGAAACAATGCCATGTTCGGTGAAGGTTCCTCACCTAGCTTGGTCCCAACAAG
AACAATGGGGACATTCGGCGCGAACCGGCGGAGCTCTGGCATCCACTGCTTGACCAGAGA
GCGAATTACCATCAGTTCAGAAGATTCAGGTGAAACCTCAAGCACACTCAAATCTGGAAC
AAGTAACTTCTGAACTTTTGCTAGAAACACATGTAAGTACGTACCTTCTTAAGAACATTC
TCGTAGCTGGCGCTGCTGATGAGGGAGAAGGCGAGCACGAACACGTCGGCGCCTCTGTAG
CTCAGCGGCCTCAGCCGGCTGTAGTCTTCTTGCCCTGACCGGAGCAAACACAAGAAAAAA
ACCTTCAGGTTCAGAACCGTTTCTTCTTTTGCGAATAGGTTCAGAAGTGATTAAAAAAAG
AACTTGAGGTTCTGAACACGAGTAGCAGTAGCAGTGGTGGAAATGGAGAAAGATGAAGCA
AGTACCGGCGGTGTCCCATAGGCCGAGGTTGACGATGTTGCCGTCGACGGAGACGTTGGC
GCTGAAGTTGTCGAACACCGTGGGGATGTAATCCTGCACGTACATACAAATCCAGCAGAG
GGGGCTCAAGAAACAGATCGGGGACCGAGCGAGCAGCAAGCAGGTCGAGAGGAAGAAGAA
GGTAGGAGAATAGAGGGAGGGGCGTACACTGGGGAACCTGTTGCTGGTGTAGCAGATGAG
CATGCAGGTCTTGCCGACGGCGCCGTCCCCCACCGTGACGCACTTGATGAACTTGGTCAC
GCTCATCTCTCCTCCGCCTCCGCCGCTCTCGCCGCGCCTCCACCGCCGCACAGACGGTCA
AGCGCACGGAAACAGCAGCTAGGTTGCTGCTCAGAGTCACAGGGTGAAGAAGAGGGGTGG
GGAAGAATGGGGGGAGCCAGAGACAAGGATACTTGTCTTCCGTGGGAAGCCAAGCCAGGC
CAGGCCAAAGCAAAGAGGGCAAGGGGAGCCGTGCCGCTGCCCTGCTCTGGTCTGCCTCCT
TAAAGAAAGAAACAACCGGCCTCTGCCAGTGTTTACTGCTGCTCTCGGGGAGCGTGGCGT
AAATGCGGGGCCGTCCGTCGCCTGGGAGGCTGGCACGACGGGGCGCGACCGAGGAGCGAC
GCGACTACGAGGAGGGGTTTTGCTTGGGCCAAAATCATATTATAATCTTTCTCGTAAAGG
ATAGGCTCTGATTTTCAGTGTTTTTAGAGCATCTACAACTTCATCTCTCAAACCCTCCTC
AAACATCCTCAAACCAGCCTCAAACATCTGAAATGATCGGCAACCCTTATATTCACGTCA
AATATGAAACGGATATGAAGAGTCCGGACATGCAGGCCCGACCCGCATCTATCTCCCATA
TATTCGTCCACGTCCGCTCGTCGAATCAAACTCTAGCCACTTGACTTCACTCCCTTCACT
TCCATCTCCCACACAAACTCACCTCTGTCATGACGGCGGTGAATGTGAGTTCTTCATCTT
CAGATCCGTCGACCACGAACTCGTCTCACGTGGCCCTGAGGAGGAGATGATCGTCCGGCT
TGCACTCCGTCGCTCCCGGTAGACGGCCGCACGACGGCAGTGTTCGGACTCACAGCGTCG
GGAATCCATTGCGTCCGCACAACCGTGGGGCATGGGAGACGGAGTGAGCTTGACTCCCGT
GATCTGGCTGTTGGAAATATGCCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTATAATTGTATTGATTGGAAAACACAATAC
TTGTATGGATACAT