Contig Data
morexGenes
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Map Locations of contig_157648 (4997 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_157648

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17369 2 1127 bp MLOC_17369.1 Available Available LOC_Os03g14580.1, FRAME:-3, EVALUE:2e-17, 13103.m01705 protein expressed protein





CDS Structure of MLOC_17369






Contig Sequence (4997 bp)

>contig_157648 4997 assembly3_WGSMorex_rbca.fasta
CTTCCCCCCCCCCCCCTCCAGCCCCCACGGCCGCCGTGGCAAGCTCTTGCCTCCCACCCA
ATAGGCAAAATGGGCAAAAGATATTTTCGTTTTCTTGTAATAATGTGGAAATATAGCGGA
AATGTAACCTTTTTATGCAAAAGGAGGTGTGAATTAGACAGAAAAATGGGAGCCAAGTTT
AGGGGATGGCTCAGTTACCTCTCAATACCCAGAAATTATTGGGAGTTAAGTTTTGGAGAT
AGGTTAGGGTTCCTTAAGTTCATGAAATTATGAGGTGGAGAATTCTCCAACTTATTCCAA
AAAATAAAAAATACATATCCAGCTAAACGGGGGGGGGGGGGGGGCTGCTGTGATTCTTGA
AGCAACAAGTTGGTTTAAATACCCTGTACAAGGTACCATTATACCTAGTTGGGTAGGTAC
AAAAAAAGATACCGTGTTTCATAGATGTGGTATCTCACCAGAATGCAGCCATTTCACTAT
CGGGCACCTGCTCATAGAGTGATTCATAAAATATCCTCAGTGGATCCCTCTGTAACAAGA
AGGAAAAGGATTATTGCTCCGCATGAAAGGAATCAGAACATATCAGATAGTGAGATGTCA
TAATGGTTATACTTCAGGAGGAGGATCATGTTTCTGCCCTGGCAATTCATACACCTTCCT
CTCCTTCTTCACCGCAGCAGCCCCCTCCTTCTTCACCTCAGCAGCCCCCTCCTTCTTCAC
CCCAGCAGCCTTCTTTTCAGCTTTCTTGATACCAACTTCCTTCTTTATTTTCTTTTCCTC
CTTCAACGAATCAAGATGATAATTTAGCAACTAAACAAACAACAAACATAAATCACGAAA
ATGGCATACCTTTGTATCATATTCATCTTTTGGTTTCTTAGTCTTGGAGACCTTGGGCTT
ACTCGCAGCTGCACTTCTCTTCTGTGATTTTGGCTGAAATATCCACACCTACTAACCTCA
ACAATAGAATTCAACGAAAATAAATCTGGAACAAGAGAAGAATAATTGCAACCTTGCATT
CATCATCGGAACCGGTTTCTTCTTTCTTTACTTTAGAAGTCTTCACCTTGCTATTGCTAG
TGCTTTTCTGCTTCTCATTTCCCTAAAAGACAGAGCAATGTTATCTTTATACTAGGCAAG
AAAGACTGGAAGAAACCAGTAGATAAAATCTAAAACATCTCCCAGTTGAAGGTAATTTTC
CCATAAGAAAATAAAATAAAATGGATATGCTATGAATCAATGTTCGTAGCTTGAACAGAC
CACCCTCCCGTTTTTAGCCTAATTGAAAACGTTGTACGGAGACATGTCCAGATCTAAGAA
AAGAATTGGCCTACGCGTTTACGAATCCTCAGCGATTGACAGTAGGCTCATAAGAAATAC
AAAAATATCAATCAATTCAATCAATAAAACAATTGGAACAAACCTTCTTGGCCCTTGAAC
TCGAAATCGGAGTGTACTCATATTCGTCCTCGTCGTCGTCGTCTTCTTCTTCCTCCTCCT
CGTAATCCTCCTCGTACTCCATCTTTTTCTCCTTCTTTGCACCCCCATTGCTCGCCTTTT
TGGCCCGAGAACGCGCAAGCGGAACGTCGTCATCGTCGTCCTCCTCCTCCTTCTTGACCT
TGGAGGCACTCGCCGCGCTCGCTTTCTTCTTGGGTCGAGAGAAGGCCAGCGGCACGTTGT
CCTCGTCGTCTTCGTCATCCACTTCCTTCTTGAGAGGATTGTGCAGCGTCGCGGTTCCTG
CGGAAAGCGCGGCGGCGGCGTCTTCTCCGGCCATTGCTGCGGTGGTGGTGAGGCGAGGGT
TTCGGCTTTTCGCGGTCGGTTTTGGGGGGGAAATGGGAGAGAGACCCGAGGGGCCGAGCT
GGTGGACAAGGAGGAATAACGACAGAGGATTTAGACGGAGGGATGAAGGATGCCCTCACC
AGCGCCGGCGGTCGGATGGCGGCGCTGGGGCGCTTGCGCCTATCGGCCGATGGGGAATAG
GCAGAGGCGGCGGCGCTTGCCCTCCGTGGTCCGGAGGAAGGAAAGAGCGGAAGGGGTTCA
ATCCCGGATGACCAAAGGCCGTATTAATCTGGGCTAGCGAGAAATAGTCTGATTCCTTCC
GGGCCGCCACTATGATTCAAGTTGGGCCAGGCGGGCTTCGACGGCCTGGACTGCCGAAGG
GGAAAGGCAAATCCCCGCGTGCTCTTTTGAGGCAGAATGTCGACCGCACGCACAGACTCC
TGAGAGCTTGTTCGGTTCTTGGAGAATTGAAGGGGTTGGGAAGGGATTGGGAGGGATTAA
ATCTCCTACAAGTCAAATTTCACCTTAATCTCTTCCAATCCTCTTCAATCCCCTCCTGTC
TGGGATTAACCGAACAAGGCCTGAGTAGGCGGTCCAAAAAAAGACTCCGCTCAACAGGGT
TTGAACCTGAGACCACACACTTCGAAGAAGTACGGCTAGCCAATCGAGGTAGAGAGTTAC
CCGGTTTATAACGCAGCGCAAAATATTGAGAACAAAACCTAGCACACATCCAAACACTTT
TTAAATTTTGTATGCAAAATGTTATTTTGAGAAAAAAAACGTGAAGGTTGTATGAAATAG
CAAACATTTATAGAAAATGCTGAATAAATTTTGAAAAACTCAACCAATTCGAAAAATGCA
AACGGGATTTTTTCTAAAATTCTCCCAGAAATAGAAAACGTGAATGTTTTTTTGAAATCA
GAATAATTTTCAAATTCTAAAAAATGGATATGTAAACATTTTTCTAAAAATGGGAACCTA
TTTTGAAACTCCCCAAAAAAACTTGAAAACATGAACAGTTTTAAAGACTTGCGTACATAT
TTTGAAACTCCCGAACAAAAATTCAAACATGAACCTTTTTAGGAATTTGCGAACAATTCG
TTAAATGGAAATATTTATTGAAACTCTCAACAAAATTTGAAAACATGAACATTTTTAGAA
AATTTGTGACAAATTGTGAAATGGAAAGATATTTTGAAACTCCCAAACAAAAATTCAAAT
ATGAGCATTTTTTGGAATATGTGAACAATTCTTTAAATTGAAACATTTACTGAAACTCCC
AACAAAACTTGAAAACATGTACATTTTTTTAAATTGGTGATCAAATTCAGAAATGAGAAG
GTCTTTAACTAAAGTAGCGATCTAGATGCTCTTATATTAGCTTATAGAAGGAGTAGATTT
TTCTGAAAAATGATCATTTTCTATAATATGGAAATATTTTTTAAATCTCCCAAAAATTTA
ATACATGAATATTTTTTTTGAAACCGGAACATTTTTAAAATTCACATAAAAATTGGGATA
TGGAAATATTTTTGAAAAATGGAAACATTTTTTGAAACCCCCGAACAAAACTTGAAAACA
TGAACAATTTTTAAAATTTGGAACTCCCAAACAAAAATTCAAACCTTATTTTTTTTGGAA
TTTGTAAACAATTCTTTAGATGGAAACATTTATTGAAACTCCTAATGAAATTTGAAAATA
TGAACATTTTTTAAAATTTGTGAAGAAATTTTGAAATGAGAAAAAATAAATTAAACAACC
CAACATAATTTGAAAACATGAAAAAAAATGTATAGCTTTTCTTTAAGACCAAACTTTTAT
ATAATATGGGAACATTTTTTAGAACACAATAAAAAAATTGAACTCGTCAACAAAAATCAA
TAACAAGCATATTTTCGTAATTTCTAATATTTTTAGAATTTTAGAAAAGAAATAGAAACT
CTTAAGAGCAAAAAGGAAAAAAAAAATGATAATTGAAAAATCAAATAAAGAAACAAAAAA
ACGAAGCAAGAAAAAGAAGCAGAAAAACGAAAAACAAAAAACAAAGAAAAAAAGCAATGA
AAACGCAGTTCAAGAACCTTATAGGATGTTCCCAGAACCGGACTGAGTAGCTCGTGCGCT
ATCTCGTAATTGGGTCAGCTCATCGTGATCGTTATGTCGTTTGCCTCCATGCGAAGCAGA
AACGCGTTAGATAGAATATTTCGTGGTAGGCCGCGCCAATTCCTCGTGTTACGAGTGAGA
CGGGTATCAACTATCTGATGAGCGTTCCTTCGTAGCCTCTCAAGGGTCAGTTTCACGCGT
CGTCACTTACGTGTTCTCAACCGTCGTCACATGTTGCATTCAAAGCGTTTTCTTTGGATT
TTCTATTTTCTTTTCATGCGTTTTAGCTTTTTAAATAGTTTTACCGGGTTTTTTATGTTT
AAGTTTTCCAACTGTCTTTATCAGCTTTGGACTGAAAATTATTTTAAAAAATAGAGAAAA
AGCATGTTTTTTCCTTTTTCAAGAAGCATGCTTTTATTTTGCAAGAAACAAGGATTTGCT
TTCATAAGAGGCACGATCTCTTGGAAACGAAAAAACAAAAAAAAATCTTGAGAGGCACGA
ATTTGCTTCCGCAAGAGACACGACCGTGCCTATCAAAAACGAAAAAATGCATTTTTTTTC
TTTTCGATAGGTTTTACTTCCGTGAGATGCATGAATTTGCTTCCACGAGAGGAATGACTC
TGCCTCTCGGAAATGGGAAAAATGTGATTTTTGATATTGTTTTTTCTTGTCAGAGGCATG
ATTTTATTTCCACGAGAGACACGGCAATGCCCCTCAGAAATGGAAAAAACACGTTTTTTT
TCTTTCACAAGATGCATGGTTTCGCTTTTGTGAGAGGCACATATTTGCTTCTGCGAGATG
TGCCTCTCAAAAACGAAAAAACATTTTTTTCTTTCTCGAGAGGCACGCTTTTTCATCTTA
TTTTTCTTGAAAAAAATCATCATCTGGAATTTAGTTTGAAGATCTATACGCGAGAAATCT
AACGGCGAAAACGGTTGGAGATTTGGACAAACGGTTTAAAAGATAAAATGTTTTGAAATA
ATGGATCTACGGAAAAAAGGAAAACGCTTGGTTGTGACAAGTGGCACACATTGTGACACC
CCGAGACCGACGTTTCAGAAGATTCCCCTTTCCTTCCCGTTTCCGTCGTGTGAGTATTTT
TATTTGTCGCATCATCA