Contig Data
morexGenes
Links



Map Locations of contig_1576382 (4384 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1576382

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17342 3 1655 bp AK251311.1 Available Available None





CDS Structure of MLOC_17342






Contig Sequence (4384 bp)

>contig_1576382 4384 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGGATTAGCATGTGTTACTACTTACTACTCCCTCCGTTCGTTTT
TATAAGATGTTTCAGACAGCTTGCTTTGCACTAATTTAGGCAGTGTCTGAATGTCTAAAA
CGTCTTATAAAAGAGAACAGAGGGAGTAGTAATTATTCAATTAACTTCAGTTTGTATATG
TTAGTATGAAGAACATCTGTATTGGCAGCCCTAGGATGAAAGAACTAACCAACCCAATTA
GATCCTTAACATGTTCACAAAACAGCAAAGAACCAGATCTGACAAGATCCACCTGAGACA
AGGAGAAATGCCTCAACATCAACCAGGAAAGGTCTAGAAAACACTAGAATAATAAAAGCT
CTAAAGTGGCAAACTGGCGATTCCCTTAATAACAATGTTATAGAACACACAAGTTACGGT
GTTACTGTATGGTTGTTGATAAAGCTACAAAATTAGTTTAAGAACTATGCACAAGCACTT
TATCCAAAAAATAGAACAGGTAGGATGGAGTGCGCCCAGTTGTATTGATATTTTATAGTA
GTTAAACCAAAGGGTTGTTCATATGTTTTTGTTTACACAACATAACAGAACAAGCATACC
AAGGAAGACTGTACGATCTATATACTCATAGTTGGCTAGCTTATATTGCATGCCATATCA
ACAAAGACAACAAAATAACTAAAATGTGTCTCCAATCTTGCAAGGTTGCATGGCATATGA
AAGGCATAGATCAGTAGAGAAATGTTGTGAGCAAGGATTAGATAATGAGACTCAAGACTC
GATATCAATAACAAATAGTGGACAATGTTGAACCAAATCACCTTTCACTTTTTGTTCATA
AGCAGGGCGATCTCGCATCATAAGCGCAGCAGCCTCTCCGTTTAATGGATCAGACGGATT
TGGGTACAACAGAAGTTGTGGAAGGAAGACTTCGAACACATTTACTAGATCTACAACAAT
CCCAAATAAAAATAAGATGAGATACAGAACCTATAATCAGGGAGTGCTCATACAAATAGT
AGGCAGCAAGTGCTCACCAAACATTGGGCTCCATGTCTGGTTGATAACATCTAAACATAC
CGAACCAGACCTACATTTTGCAGGCAAACAAAAAGTAGGTCAGACCAGTGCGAATTTTGT
TACTTATGCTAACCAAAAGAATTTGATGGTAAAAACGCTCACATTTCATCCACATTCGGG
TGATAAATCTTATTAATGAAACCAATTGACGGAGATTTGTAAGGATATGCATCAGGCAGT
TCTACTCTAACCTTCCAGACACCACCTTGATAAATACCTATCAAATTTAGAACACATCCA
CAATTGATTAGAAATATAGCCGCTCTTTCCATACAATAGAAAAAATATACTGTACTTAAA
TTCACCAAATTGCGAAGATGCTCCAGGGCAAATGAACAAGCGAGCAATTCATCTGCAAAC
GAAACCTAAATCTTGAGCTAAACCACTTGTAAATGATAACTTGTCATACGATCAACAGGG
GGTTCACAATTTCCGCCAGAGTTGCTTTGCAGTACATCTAGATCAGAAATCGGGAACATA
AACGCGGATCATGAACCCAATAAACAGGATTGAAACCGGATTTTGCGCAAGGACCGTACT
TTCAGTAGGCCCTCGGAATTCCACGAAGAATTCTTGCATCCCATCGTTCACCATCTCCAC
CTTATAGTCGCTCATCATCCTGCAAACAACCAAGAACCGCCCCACAAGAAAATCAGATTA
AAACCGAGCCTCCAAGGAAGGAATCAATCGCTTGTACCCAACAAGAAAAACAATTTCCAA
GATCCTCACAGCTTCATGAGGTCCATCTCGCGGCGCTTGCTTGGGGAGGACATCTTGGGG
GCAAAAAAGATGAAATCTTTCCTTTCTCCTCCGGAGACGCGTCTCCTGGGCGTGGGGATA
AGGGAGGAGGCAGAGAAAAGAAAAGGAGAAAGAGATTGAGCTGCTTGTGACGGTGCGTGC
GTCGTCCTCCTCCCTGTGCCTGCGCGAGATTTATTTTATTTTTATTGCTGCCGCAGAGAG
AGAAGGCGGGGAACAGGGAGGCGAGACAAGCACAGCAGAGAGGAAGAAAAGGGACAAAGC
TAAATACCTTTTTTACACAATCAATAAACGTCCTCTTTATATTTATTTTTGCGCAAAAGC
CCCCAGATATATATTGAAGGACCAAACAGCAGTACAAGCACCCCAAAGAAACCAGAAATT
ACATCCAGGTCCAAAGAGTAGCAAGCAACCTCATCTACCAACATGAATCAAGGGCGCGCC
GCGGCCGCTTCACCCGAAGCCAGCCAGATCTTGAATCTCACGACATCTACGCGAACGGGG
AGTATTCGATCTTCAGTCCAAGAGGACCAACACAACAAGAGGAAAGTCACCGCCGATGAG
ACCCATCACATACCCGAGGAGCACAAAATGTCATCGGCATAGGGAACGACCACCACCACC
ACCAGAGGAACAACCGAACCTCCAGCCAGTGAAGGAGGAAACCTAACTCGCGAGCTCCTC
GATGACGTCTCCTCTGGCCAAACATGACCGAACAAAGAGGGAGATTGAGGAGGAAAACGT
TGCACCACACCATCCCCTCCGTTGGACGACGTTGATGATTAGGCTGAAAAACTCCAGCAA
CGCCGCCCAAAACCGAATGCTTCCAAATGCCACGTCGGGGAGGAGGAAGGATGAAAGATC
CATTATTCGAAGCCAATGTCAAAGCCTCCATGACACCGACACCTCTAGGAACTAAAACTA
CCATATCTACATGCCTGGGCAAGTATCGACATCCCCACCTCCTCCAACTGCTAGATCGGT
GACCGGAGGAGGCTAGGATCCATGACCTCGCTAGCGGAAGGTGGCTATTTGTGGCTTCAC
TCCTTGTTTCATCTCTCTTCTTATCTCGATTACTATTATGATTATTTAATTGTAATCATA
GCTACATCATATAGAAAAAGAGAAACAAGTTCACTAGGAGCATCTTCAATCCATTCACCA
CAAAAGGAGCTTCCATATGACAATCTTAAAATATGAAACAACAGAATCACAAAGTCGTGT
GGTAGCAATCCTCAAAAATGGTAGTCGGGTGACCTTTAGCTATCATGGTCTCTACAACTT
CATGATATCGGAGTTGACAATTATCTTATTGTGGTCGGCTGAGAAGGATAGAGAGGGCCC
AAAAGTGAAGGGCCATTGCTTTGGCTATCAAAGCATCAGAGCCCTACTCGATCCTTTTAC
ACATGTTTTCCTGCCATATAATTACACCAAGGGATCCTTGCAACATATCAGAATCAAAGC
GTGTAGCAACTTCAAGCTTAACAAGGTCCCTCGGAGGGGGTGCAGCCTTTGGAATATAAG
CGGTCGTAAAGTTTGATGCAAGGGCACAAAGAGACGAAGTTATGATCATGGCATCCTCTG
GTGATTCATCATGCACTAGTTTCGTCCTTTGCCACCAAAAATATTGTAACGCCCAACATG
TGGTACTAGCCCCAACGAAGAATTTAGAATCCTCGCCAAGGAAGAAGCATATATTGGTTT
CCCCAACACATGACTTTATAAATACAAGTAGGGTCATATGTTATTAATAAGGTGGACATC
GCAATAAATACAACTACTCATGAATAGAAGAGTTTAATACGAGATACAATAGGGCATACA
TATGCCAATACATAAATATTTCACCAATTAGAGGTCAACACGACCAACATTACATCAATC
TATGAAATGGAAGAAGGAACGGAATTGAGTACGGACAAGAACCAAATATGCCTAAGAGGC
AAGATAAATAAATAGCGTCCACTCTTCTAATCCTAGGTCGCCAACATGGATTTCATACTA
ATGATCATCGTCAAAGAAGAACAAAAATTAACTCCACGTATAATGTTCCTGCTCTCCTTG
TAGAGCAACTTATCTATACCTGCACTCGGGGTTGTTGTGGTATTGTGAGTCATTAAGACT
CAGCAATAACATTACCAAGGGTACTAAGACTAGCATCATTTTTTAGGTATGATATGGTTT
AAGTGGTGAGGTTCACTACAAAAAAAAATCCATGATAATACACACTTGTCACAGCAGGTC
ACCTTTTGTGTCGCGTATCAACATCGACGATGATTTTATGATGGAATCAAGATAGTCATA
CATGTGTTGTCGCAAAAGTCTTTCATGACAATAATCCATTTATCATCACGAAAGATTTCA
CTTCCATGATGATAAATGGAATGTCATGGAAGTGTTTTCGTCAATGGTAACCGACATGTG
GCAGCCACCGTAGTGGGTCATTGAAAGGACGCAGATGTCGCCTAAATGGGGGTGAATAGG
CGCTTTAAAATAATTACGTTTTAGGCTTGAACAAATGTGGAATAAAACTAACGGTTAATT
TGTC