Contig Data
morexGenes
Links



Map Locations of contig_1576299 (2431 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1576299

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17320 1 2232 bp MLOC_17320.1 Available Available LOC_Os12g03130.1, FRAME:+3, EVALUE:0.0, 13112.m00268 protein CDC45A - Putative DNA replication initiation protein, expressed





CDS Structure of MLOC_17320






Contig Sequence (2431 bp)

>contig_1576299 2431 assembly3_WGSMorex_rbca.fasta
GGAGGCCGCGCCTCCGCGCCGCCCCCGCCGCCGCCGCAGCGGTTTCCTCCGCCTCCGCAT
CCCCTCTCCTGATCCTCCCGTCCGCGTCCGACGCCGACTCGCTCTGCGCGCTCAGGATCC
TCGCCCACGTCCTCTCCGCCGACTCCGTCCGCTTCTCCGTCTACCCCGTCGCCTCCACCG
CCGATGCCGCGGAACTCCTCGCCTCCTTCTCCGGCGCCGCCGTGTCCTCATCCCAGCCGC
CGCCTCCGCTCTGCGTACTACTCATCAACTGGGGCGCGCGCTGCGACCTCCTCCGCGGCG
TCCTACCGAGCGGCTCCACCGCTTTCGTCGTGGACTCACACCGCCCCGTGAACCTCCGCA
ACCTCGCCGCGGGGAACGACCGCGTCGTCGTCCTCTTCACCGCTGACGACGAGTGCACCG
CCGACCTGTCGTATGACTTCGACGTGTCCTCCCTTGCCGATGCCTCCGACCTAACGGCCG
AGGGGGACGCGGACGACGACCACCTCTGCGCCTCCGAGGAAGAGGAGTCAGATGGCTCGG
ATTACGATTCCGACGCCGAGGGCGGGATGAGGAAGAGACGGCGCGCGTCCGATGACGCGG
AGGCGGACGGCGGCGATCCGGTGAGGCTGTTCGGGAGGCTGCGGCGGGAGTACTACCGGC
TCGGCACCTTCCACGGGAAGCCGTCGGGGTGCCTCATGTACGACCTCGCCCACGCGCTGC
GCAGGAACACCAACGAGCTGCTCTGGCTTGCCTGCGTCTCCCTCACCGACCAGTTCGTCC
ACGAGCGCATCACCAACGAGCGCTACCAGGACGCGGCCATGGAACTCGAGCAGCACATCA
ACGGATCCGGCAACCTCGATCCGTCCGGCGTCGGGTCCGTGGTCACGCTCAAGGACGGGA
CCAGGATCCGTGCGCCCGAGACCTCCCGCATCGCCTACGAGGACGAGCCGAGGCTTATGC
TGCTGCGGGAGTGGACCTTGTTCGACTCCATGGTCTGCTCCTCTTATGTCGCGACGAGGC
TCAAGACGTGGAGCGACAACGGGCTCAAGAAGCTGAAGCTTCTTCTGGCGAGGATGGGGT
TCCCGCTCGCCGACTGCCAGAAGGGGTTCCAGTACATGAGCATGGATGTCAAGAGGAAGA
TGCGCGATGAGTTTGACCGCTTCCTGCCGGAGTATGGGCTCACCGACTTCTACTACCGAA
GCTTCCTGAGGGTGCACGGGTACAAGTCCAAGGTCTCTGCTGCGGATCTTGTGTATGGCG
TCACCGCTTTGCTTGAATCTGTGAATGCCGAGTCCAAGGAGTGTCGTGCTGCTGAGCAAT
TCTGGGTTGCATACTCTGCATTGTCTCCGAGCAATGTGGATCAGCTGCAGAAAGGAATGC
AATCTGCAATTGAGATACAGAGGGCTATACTGAGGCAAGGAAGCTCGGCCATCACCAAGA
GCGGCTTCATACGGAGTGCAAAGAAGTTCCGGTGGGTGAAGCTTGATGACCCAGTGGACA
CGAGCAAGCTGTGCCACCCTCAGGCCCTGACCAAGTTCTGCTTCTTCCTGATGGATGCAC
TGAAGGAGCGGGGTGCAAGGATGAAGCCACTGGTGTGTGCTTGCTTAGGGAGGGAACCTG
AGAAGGTGCTGGTAGTTGGGGTATGGGGGAAGCCCAGGCTTGGGGCAGTTCAGGGGAATT
CGTTCGGGAATGCATTTAGGTCAGCGGCAGAGGAGATTGGGGCAGACTATTTCCATGACA
TGTTTGAGTCATCATGGATTGTTCTTGACGTTGTTGCTGTCAGTTCTTTCATGATTCGGT
TAACAGAGAAACTGTAATGATGGTATGTGCTGGCCTATGCCAGTTATCCTTTTTAGTCCC
AAGGAGTTTGAGGCTTGATTCTGCTTCCAAATATAGGAGCTTCAGTCCTGGCGGTACATG
ACATGTATTTTCTCCTTATCCACCTGAACCTTTTCATGATCATGTTTCGCAACGAGAACG
GAGGTTTTCCACTGTTTAGCCACTTCAATTAGTAAATAATAGATCAATGAAATTCAGATG
CAAACCTTATCACAGTATGGAAATGAACAAGGTATATGGTACTGTTGACCTGATAGTGTC
CGTTGTATCTGTGCTTGCATAAGTGTGTGCCTTCTGATTATAGAAAAGGGCCGTCTCCTC
TTTTTGTACCACTAGAGTTGAAGTTCTTGAAGTGTGTAAACTAACAAGCCTTTCTTGAAT
ATGTGCTGTTACTAGCAGTTTAGCACATGCTAACTTAAATGCATATTTGTTTATAATTAA
AATTATGTGGATGCATTTGGTTGTCTCTTGATCAGGATAGATGTTTATAAACGTATAATA
CTTCTGGTGGTTGATTATACATTAATATCCTTTCACAAATTTGGTAGATCATGTTGAAAT
TTGGAGGTGGGCTTTAGGCCCATTAGAGAAT