Contig Data
morexGenes
Links



Map Locations of contig_1576234 (2654 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1576234

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17296 2 1036 bp MLOC_17296.2 Available Available LOC_Os08g35860.1, FRAME:+2, EVALUE:1e-44, 13108.m03761 protein cytokinin dehydrogenase precursor, putative, expressed





CDS Structure of MLOC_17296






Contig Sequence (2654 bp)

>contig_1576234 2654 assembly3_WGSMorex_rbca.fasta
GGCCAAATAAGGAATTCTCTCTATAATAAGACGGCTGGCCGGGCTCCGTCCCAGTCCCTC
CGCCGATCCCGTTCCGTTTCGGATTTAGCCCTGGCAGACCGCGCATCGGCGGCCACCAGC
TCAGGTCCTATGATTGATAAAACTATTGATTGTTATCGCCATGCACGTCGCACTCAGCCA
CAGGCCATGCACTGCAGTGCAGTGCACGCACCGGCGCCATTGTTTACGATAAGCTAGCTC
TCTCTTCCTTTGTCGTGTCGTGCCTTGACGCGTCGTGCTGCAGGTGGGACCCGAACACGT
CGGTGGCGCTGCCGGAGGGCGAGGTGTTCTACCTGGTGGCGCTGCTGCGGTTCTGCCCGG
GCGGCGGCGCGGCGGCGGCGGAGGAGCTGGTGGCGCAGAACGGGGCCATCGTCGACGCCT
GCCGCCGCAACGGCTACGACTTCAAGACCTACTTCCCGCACTACCGCGCCGAGGCCGACT
GGGCGCGCCACTTCGGCCCCAACTGGGCCCGCTTCCTCGACCGCAAGGCCCGCTACGACC
CGCTCGCGATCCTCGCCCCGGGCCAGAAGATCTTCGCCAGGACCCCTTCCTCCTCCCGCC
TCGACCGATCATAGCTCATAGCTAAACGTGGTTGCCGGCCAAGCCATGATGGTCATCAAG
ATCTCGATCCATCCACAACATAAGAAGATGATGATGATGATTATAGGGTCATTATTCATT
AGGCACGCACATTGGGGGGACAAAAGGGGCTCCATGGATGCTGTAAGGGACTGTAGTAGG
GAAGGGGTTGCAAAGAAAACCAAACATGTCGCCTTCTTTTCGTCGCTTCGCTTCCGTCAG
GCAGCAGCTAACAGGCCCCGTCCCCTAATTAGCAATTCAGCTAACTAACTAAGTAATTTG
TTCATGGAAGCATGCATGCATCAAAGCATGAACTCTTGTTCTCTCTTGCAAATTACTTTT
CTATGTAAACAAATGTAAGACGTTTTTTTGTCACTGTCTGTCCAAGCATCTTTTGTTATT
CCTCGGAAATTTCCCACCTCGTCATTCCGCGTTCTTTATCTTCGTGGCCATTTCCCTCCC
CCAAGCCACATCAAAAAAACAAAAAAAAGGAAGTAGGCACATCAAAAAAGGAAGGATGGA
AATCCCTCTGAAACTTACGCATACACATCATGATTCTTATTCTCTGGTCCTCCTTGCATC
TATTCAGATATTGCAGTTTCCCTACACGGTGTTCGAATTGGCATTGTGGAGCCCGGTTCT
AGATTATGCACCGGGTACACAATATCACCAGAGCCCTTTTCTCGTCCGCTGTTGCACGTT
ATCGTGCAAAGGAGGAACCGTGGAATCATGGCGACAATAGATCATAGCTGTTGTTGACGA
TAATGATGGTGATCACACTGCTGATTCTAGCCGTACGTGGTGGTGCTGAAGATCTCGACA
ATGGGCAATGATGATATTAGTTTGATATTTGGCTCCCTATGTCTCCCTCTCTCAGCCCAT
GCACGTGTTTGCACTTTTATAATCTTCTGCATGGTCCTCGGAGTGCATCACTTTGAGCTT
TAGCTAGATAAATGGTTTGAGAGATCCACATAAATGGATTTTTTTCCCCTTTGTTTTACT
TTTCAAAGTTTTTTTAGGGTGCTATTATTTTTCATTGAGGACCCACGTGAAATGGAATGT
AAGAGCAACTCTAGAGATTCGCCATATCGGCGATGGCCACCCACCTGATAAGGAGGCTAC
ACAGGTGACATGCAAACTTAGACTTACCATATTTCAACCTACATAATTCAAACACTTTCA
TTCCCACCATATTTAATTGTTTACCACATCAAGCAAACATGCACATTGTTTTTGACAAGT
TGCATAAACAAAAGCATTTCATGGGCGACATGTACCAATCACATGTTTCTTCCATTTAAA
CCGTTCCCTCTTTCGAGTTTTCCGAAGATGCTCAAATCTCGGTGATGCGCGCGAAAATCT
CATGCCACTTGATCCATTTTGTTCGGAGAATGAACTGATTTTGCTCGGATGTGCGTTCAT
TTCTTGACTGATTCTCTGTAATTTGGACCTACACGGCTGCATCTCCTACTGAACTTGATG
CCTACGTGCCTTCATCTTCATGGCATCGTCTTCTCTCTTGCATTTCATCCCATATATCCC
TTCTCATGGTTCTTATTCTCCTCCATCTCTAGTTTATATTGCTTAATCTTTTTGGCATAC
TCGTTTTTTGTCCTCATCCACTTATCGATCTTTTTTTCATCGCCTCCACCTCTTGTTTTC
TCTTGAGCCTCGGATCCTCTTACTTCCCATCGTCTGGCCGAGCCGTGCTAGACGATGGAG
TGGTACTTCTAGGACATTTCCCCTTTTCTCTCTATCAAGATGATTTGCGTCGTCGTCCAT
CTCAGGAGAGGAATTGGCCCACTTCTGAGCTTTTGGGTTGCCATCATCATTCCCCATCTT
ACACTTCTATAGCTCTTCCAACAAACCCCTATAAGGTTAGAGGTCAAACGGTTTGCCCAT
TCGACTTGGGCATTTGTTTGTACCACTCTTGGGCTATCTCATCCTAAAACAATCAAATGC
ACAAATTGATGAGAAGGCTCAAAGTAATGCAAATGTGGCAATAAAGACACAATAGTGGAA
AACGGGCCTTTGGC