Contig Data
morexGenes
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Map Locations of contig_1576189 (3495 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1576189

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17282 1 786 bp MLOC_17282.1 Available Available None
MLOC_17283 2 1171 bp MLOC_17283.1 Available Available LOC_Os05g29760.3, FRAME:-1, EVALUE:2e-62, 13105.m03028 protein ferrochelatase-2, chloroplast precursor, putative, expressed





CDS Structure of MLOC_17282






CDS Structure of MLOC_17283






Contig Sequence (3495 bp)

>contig_1576189 3495 assembly3_WGSMorex_rbca.fasta
TACGACGCTTCTAGCTATTTCCACAAGAATGACCTAGTATTATACTCCGATGTCAACAGC
CTTCTACTACTTTCAGTCAAGAGAGGACACCAAGATCATGAAACATGGTTCTTACCTTCT
GCGGTTTTGGAAATTTTAACAACTCCTTCTCGATCAAAGTTGCCATGGCCTTAATATATC
CTTCACGCTGATACCAAGAAGGAATAACCGTATGTTGCATATTGACCAGATACTCATCCT
CCCTAACATTGCAGCTGAATGTGTCACTCGTATAATCTTGAAAAGCGATGGGCAATTCAT
CATTTCAAATTACTATACTTACCTGAATATGCTCTCCAGAAGACGGAGACTTGAACCACT
GGTCGATATGGAGAACTGGGGGTAAAGAGGTAGTACAACAAGTTTTGTGATTCCATCCTT
TTTTATCTACAATGCAAAGAGGACAAATTAATGTCTTGTGCGACGAAATATAAGTTATGG
TACTCTAAGTAACTTACCATATCTGTAATAGCATTGATATTGAAAGTTTCATGAACTTTG
AATATTCTTTTGCAAGTTTGAAGATTTAAAACTGCATCTTAGATTACCATACTATTGCCA
ATAACAATCCAAAAGTAAATAATGTGTTAAAGAGTATTAGTATAGGTCTAGATCGCTTTA
CGTGGTAGTCTAGATTCTCTTCCTTGTACCCCAAGTCTATTGTACTATACTATAGTTGTC
CCATTGGCCATGCAGTACAATCTAAGTTGCCCCTCTAACATGGTATCGTGAGCCCAGGTT
TAGTGTTTTCTGCTCCGGTGCCACAACTCGTTTCTTCCCAATCGGATTGTTTTCCCCAGT
CTCCACGGTCAATCTTGATCTCTCAGGGCTGATCAATTTTTGGTCTGACCCCCACCTCTG
GAGTTCATCCCTCTCTGTGAACATCAAAGGAACTCCAGACTGAGTCCCGACGGCGGCTGC
TCTACCTGGAGAGCTGTCACTGCCGCTCTTTGCACAATGCTGTTGCTAGCATTCTGCTCT
TCCCATTGCTACCGCTAAGTGCTATTGCTCGCCCATCAGCTTGCTGCATCTTGTGCTCTC
CTTGTGTTCCTGCTGAGCTAGTTTCTACTCTGATTAAAAAAAAAAGGTTAACATGGATCG
TTTCGCTGTATCCATTTTGAACATGCTCCTTCCAATCGGTGTTGCATGCTCATCCGCTAG
TTGCTACTCATCACTGCTCCTTGTCGGCATCTCAACCGCACGGCCTCCTCTGTAGCCTCC
GCTGCAAACACGATGGTTCCTGCATAATTATTGTTGTAATAAAATCTAGCCATTGCTCCC
AATAAATAGCGCATTAGGCGATTTCCGTTTTTGCGCGTGCCGATGGAACCGCGCCTAAAG
CCATCGAAGAGCTCAAATCCAACATTCGACATCACCTTCTATCAGAGCATCGTCGGCAGC
CTCCGCTACTTGGTGCACACTCGCCCGGACATCAGCTTTACCGTCGGCATGGTGAGCCGC
TTCATGGAGGCGCCCACGAGAGAGCACATGAGTGCCGTCAAGCACAGGTACATAGCGGGC
ACGCTCCACTACGGCTGCAGCTACAGCAGGAAATGCAGCGACGCGGGACTCCGGCTACAG
CGACGCTGACATGGCTGGCGACGTCGACAACCGGAAGAGCACCTCAGGCACACTTTTCTT
CGGCTATTGCCTGGTGTCTTGGCAATGTAAGAAGCAGAAGATCATCTCGCTGTCCTCCTG
TGAGTCAGAGTACATCGCTGCCACAGTGGCATGCCAGTGCATATGGCTTGGGTAGCTCCT
TGGCGATCTCCTCGGGACAGATCCTCTCATCGCCAGCCTGCTCATGGACAACAAATCTTA
GATTCAGCTCTGCAAGAACCCAGTCTTCCACGACCAAAGCAAGCACATTGAGGTGCACTA
TCACTTCATCAAAGGCTGCATTGAGGACGAAAAGATTGCCGTCAACTTCATCGGCACCTA
CAATCAGCTCGCGGACATCTTCACCAAGGCACTTGGGCGTGTCCGGCTCGAGCTACTTAG
GGAAAAGACTGAAATAATTGAGCAGCAACTAGCTTAGGAGGAGTTTGTTGTAATAATCTA
GACGTTTCTCTCATTAGTAGCGCATTGAGCGATTTTCGTTTGCTTGTCATGGCAACACAT
TTTCTACCATTTGTATCAGTAACTTCTGATACTGACAGTATTGAACACCAACCAGTTGCT
CCAAAAGTCCAGACTGATGGAGAGAGGCGGGCCATGTATTTGAATAGACAGAAACAAATG
CCCAAAAATTGATCAATAAAGTAAACAGCAGAACTAAACTAGGGTAATGGACATATGAAA
AGCCCCTACTTGTTCTATAGCTTCCTCGGTGAAGGGATGCCAATACCGCATTCCGACGTA
TACCTTAGCAGGGATATCCTTTCCACATAATGCCTCCATAAGTGCTTCTCCCTGTACAAG
GTTTCCATAAAATGGTAAAACCATAAAATGAAATATAATATAGGATGCATATAGTTTATG
GGAAGATATGAATAATATAGGAGAAGTGAGGAGACCTTAACTAATTTACTTAGCATCATG
ATGATATGAATAGGTCAACGCCTAAGGGAAACAACATATTTTCTTGCTCAACATCAAATA
GAAGTATTCTTGTCAAGTGACTCATTAACCCATCTAGTAGTGTGGCATTGGCTTGAGGGC
AGTGGCGGACCTAGAGAGTATTTTGAGTGGGGGCAAACTATTTGAGTGGGGGGCACGTTC
TTTAAAGAATGAACGAATTTAAGCATATTTTTCAAAAACTACAAGCAAATATTGTTGTAG
TTTCAAATCATAGGTCCGCCCCTGCTTGAGGGAACATTATAAGAACGAAATGAGCCTAAC
TCAATTGTTTGGGGGAGTGGATTTACAGCCCCACCACCTGAGTTCAAGTCCCCACGGATG
CACATATGGGTTCCTACATATACTGTGTGGGTTTCTCCTACAGTTATTTTCTTCAGAACA
AGTGAACGTTATAAATGATTAGAATAAATATTACAATAATTATTCACAACATGCATGGTT
GTGCATTATGTTGCATCTTACTTAGACAATGAGCTGCTGAACAGATTGCTACATTGTTTC
ACTTATGGACTAGGCGTAGGTGATTTCGAGTGATCTTATATTATGAGTAGCAAGCAGTTT
CTTTTGTTTTTGTTTCACTTGTGCTCCTTGCTGATAAGTGCTTCCTAGGATTATGGATAC
AATCTTTTTTCAACATTTTACTGTGATTTGGATAGATAGCTTTAATTCTGCTAAACAGTA
GGTTTAATCTGTGATACAGAACTATTTTTTAGTTATGTTGTTCATGTTAAAAGGTGTAAC
ATATATCCGTGAAATATAAACGGTATATGATTGTGTTTAAGTTAGTTGTTGGAGATATGA
CTTGTATAGCAATCCAACAACTAATCTTGTAGATCTTTGTAACTACCTGGCCGGTGGCCT
ATATTAACACGTAAA