Contig Data
morexGenes
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Map Locations of contig_1576110 (4792 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1576110

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17254 3 2219 bp MLOC_17254.1 Available Available None





CDS Structure of MLOC_17254






Contig Sequence (4792 bp)

>contig_1576110 4792 assembly3_WGSMorex_rbca.fasta
GTCGACAAGGATCTCCAGGGCGGCCATGAGGAGGAGGAGAAGAATTGCACTCCGAGCACG
CCGCTGGCGGCCGGGGACAAATAGCCCAGTCGATCCATCCCGTCTCCAGTTGGTGTGATG
TTAATCGTTCTTGCTTTTTCTACATGAAGTTCATTGTTCTTCTTGGTTGATTTGCTAATC
GGGTTAGTCGTCTCGAACATGAATGAAACGGTTACAGGAAAGAAGAACGGAGCAGTTGCT
TCTTCTATGTCGGAATGCAGATTAATTCATCATGCTTTCATCGTGTATGTACGTACGCGT
TGCTTCCGGATCCACGGCAAGAACTCAGAGCAAAACAACAGTGGAGAAGGCGAAAACAAT
TGCATGTATTTTGTTGTTCGTCCTTCAAATCCAGCAGGATGTTCCTCAGGCCACGATACA
AAAATGCATGCATGCTGCAAAATCGTGTTCCAAATTCATGGGCTAGAAACTGCACATACT
GCCATCATATGGGTGTGACCTGTGAAATCATGCATTGCATGCCCTCCACAAGAATGGCGT
GAGGCGAGATCTGATTTGGCAGAAAGCAACGCATGCAGGGAATTCCGAAGTTGGAGGACC
AGCCTCCGGTGCCAGCGTAGCGGCGAATCCTCTTGGTTTGGTGTCTACGGCTAGCTGACC
AGACGTACTCAATCTCTCTGGACAGACATCGGCTGGGTGTTTCTTTCCCAGGCGGCCACG
CGACCGCTATTATGGATTTATGGATAAGGCGAGAACAGAGACAGATAGACACCCCTTTCG
CGGTTGCATTGTTTTCCTGGTGCCGCATAGCCATCGAGCAATTATATTTTTTTGACCAGG
CCAAGCCTTTGTGCATTGTAAATTTGTAATGCCGCGAGAATAGTGCTATTTCCCTCCCGT
TTTACAGATCTTGTCTAAACTCCTTCCTTAATCAATGAAATGAAAATTATCTTTCCTTGT
TTAAAAAACATTCTTGTATCATACTGCTAGTGCTCATCGCGGACCAATTTTCTTCTTTCA
GTCAAGTAACCAGAAAGATGCTGTCGTGAAAAGTCTTGAATTTGCGGTGCTTTTCTGTTT
TGAAGGACTAGGTTTCAGTGTGTTTTTTGTAGCATCAGAACAAAGTATTTGAAAGAATTT
CAGCAGTGGGGGTGAGATATATACATGCTAAAGTTTTCACTGTTCCTTTTTGCTTCTTTG
AGAATGGTTTTCCGTTTGTTAATAACTGATTATAGCGCTATCAGAGCATGGTATTTGGGC
ACAGTTTCCAGAGTGCGCATATCACCGTCCCTCGCCGGCCTCGACAAGAATGCATAATCT
GATGTCCCTAACAATCCTATAACTCGCTGGAAACAATTCTACAGATATTACGAATGCTCT
TCAGATCCCCGAGGGGTGTAGAAAGCTCTCCACCTATGCTTATGAGGAGCATTTAGAAAT
GAGGAAATGCCAGGGGATGAAACAGTCAGATTGGATGAACGGGCGACAGGGGGTGAAGCA
ACAGTCACAAGGTCACAGTGTTCTGACATCACCACATATTACTCACATAGTGATAGATAT
ATTTGTTAGGGTTAGAATCACCTATTGCCGGATAAGCTACAGCAAAAAAGATTTTTCACA
ACAAAGTAATCTTCTGATAGCTTGATTCACAGGTTTGTTTTTAAACAATACAGAAAAATG
GTTTGACAATCTAAAGGTTCTTGCATATATTGCAAATTGTTCCTGAAAATGCCTCTTTGG
ATGCCAATGCTTAGGGATCTAGAGGTGTTAATATTGTTTAAGAATGAACTAAGAGGGTCG
ATTCCAATATGGATCAACACCTTGAACTTGCTATTCTATGTAGATTTATCAAACAACAAC
CTCACAGAGGCTTGTTGGACATAACAATGCTGACTGGAATCAGATGAAAGCACATCCTTT
TAGACCCAAAGGGCTTTGAGCTGCTTGTTTACAACTGACAAAAACAACTTAACAAGTTTG
GTACCTTCAGAGATAAGTTGAAGCCACTCCCATGTTGATGTTGGGCTCCAAAGATCTTGT
CTGGAGAGATTCCAAAATCACACTCTAATGGCCTGTTCGGTTCCTCTCCGCTGCTCAACT
GCGCTCACGGAGCGGACCAGGCTCCAGCTCATTTTCACGGAGCGGCTAAAACCGAGCTCC
ACAACTCCGCGGAGTGGAGAGATTCCGAACAGGGTCTAACCATACAAACCTGGAGGTAGC
AGACCTTTCCAACAACCATATCACCAATACAATTCCAGATGCATTGAATAATCTTCACTA
CATTTCTAAATTCAGCATTTCCAACAATTACTTAGATGGGTTTGTTCCAGTCGAAGGCCA
GTTCGCCACTATCTCGAGCGCAAGCTTTGATGGAAACCCAAAGCAAAGTGTCCCAGTTCA
CCACCACAGTCAGAGCTGTGACTCAATTGAAGGGACTCGAGGCTCCACAGGACAAGTACA
CAAGGGCATGTCTGCGGTTGCATCTCTTGTTTTCATTGGAGTAGGGGTACTTTTAGACCA
GGGATGATTTTACAGGCTTGTCCGGTAGACGCGCTTCTGTTTTGGGACGAAGTTAATGAT
CTGGGAGAGATGTATGCCTTCCATTCTTCACTTTGGCTTGAGGCTTCAAATTACTGTAAA
GCATGCCAGGTTCCAAACTACAGGAATAAAGAGGATGACAATAACCGGCTAATAGAAAGA
CAATACAGATAATTTGTGTTGACCCTTGTGCAAAATTTACAGTCATTTGGATGGATAAAT
TACAAGGAGTGGCCATAGCTTCTGCTGGAACAATTAGCAAAGCTTAATTACATAGCTACG
CTCAAAGGCCAGTACTGTCAGAAAGACAAACTCAGTTTCAAGGATCACACTGTAGACAAG
ATGAAGTAGTGGAAAGGAAAACACAAAGTTAATCCTGACTCTGCTTATGGCTTTGCTTTC
TTACATCGAAGGTTTCAACTTACTTGGAAACACGATAAATCAGAAGAAATAAGAAAAACA
CAAAGTTAATCCTGAGTCTGCCTGCGGCCAGCAATAATTCGGAGAAAGTCCTGCGGTATA
AACTACCAACGGCAAAGGGGGGTATTCTGGACACGATCTAGATGAAGATTGATTGGCACA
GTCCAACCTAAAGAACAAGACAATACTATAGGTAATGAACAGGCAGCTGCCGATATAGTA
ACTTATATAGATGAAGTATGGTTTAGTTAACCAACCACTGGCACGTTCGTCTAGCTTCTT
GTTCTTCAGAATACCATGTACATAACATGGATATCAGAGTTCTAATTCCTAAATGGTGCA
CAAATCAGGTTATAATAAAGCCAGATCAACCGTAAAACGGAAATCAGAGGATGTGTGCAT
CACTCCATGCAGAGGCCAAGGGCTTCCCCTCTTTTCAAGAAAATAAATAAAATGAAAACC
AAGTCATGGATGAAGAATTTGAGATATATATTAGATGTCAAGGACTGAAGGTTCTGATTC
GATACAGGGCACTGAAAAAGGCCAGAAGGTAGTTTCTATCTGAAATTATTAATTTTGTTT
CACTTTGTTCTAACAGTTCTAGAGAATTACGACCATGTATCTAGAAACCAAAATTCTGAA
CCAGATAAAATTAGGATGTTTGTTATCATCGAGCTCTATATCTGATATCTGTGAGCCAAC
CACTAACCCACCTGAGTAATGATGATGTATTTTGAATTATTATCTCTTCATCTAGACCAT
CTCAGAATGTGTACTGCACCGACATGGCGAAATTAGGCGCATCTATGCAAGATGTGCTTA
CCTATGATCCGTTGCTGTCAGCCTATGGTGTCGGTTACACATCTCACTAAATTTTCCTGC
TGAATTCAACATTATTTTTCTGGTGAATCCAACATTATAAACCTAAGACATTGTAAGAAT
AAATTAATTGACATTGAAAATTAGTAAGACCTGATTACGATGTTGGAGCTTTGCGTCTAC
TGTCAATTCCCTTTGCAAGACTTGATAATAACAGAGCACAATCAGGTCAGACACAGACGT
CCACTATCAAACTGAGATCATGATTCATGAACCATACCAAAAGCATGCATAGTGTTGCCT
GAACATTTTCATGCATATGTAGGAGCACCTGTATGTTAAGCCACCATGTTGGTGAAGCCC
ATCTCCTCGAGGAGCTCATCCACCTGCTGCAACTCCACCGGGGGCAAGCCGGTCAAGAGA
TCGTCGAGCTGTCCATCTGGGGTGATGCTGTCCGGGAAGAAGCCAAGCGCTGGCGGCTCC
ACGAATTCGTTGAGGTTCATGGCCGACACCTCACCGTCATCCGCAGCGGCGGCCGAGCGT
GGTTGCTTGAAGTTGGTTTCGGCTGCCGCACCGTGCATCCTGACAGCCGCTGAGTCGTAT
GCTCCGAAGATGTCCTCGGCGGCGCCGAAGGTGCGGAGCCACTGGTCGGCTCGCCGCACC
GGGTCCCAGATCTGCGCCGAGTACTTCCCGCGATACCGGTGCACGCCGACGTGCCCCGAC
CGAGTGCCCGATGCCGCCACCTCCTTCCTCCAGGCCCGAATGTTCGAGCGCAGCTCCGGG
AAGTGGTCCATGGGCGACTCCTCGCCGTCGATGGCAGCCGTGCGCGGTTGCTCGTAGTTG
GTCACGGCCTTGGAGCCGTACAGCGTGACAGCCGCCGCGTCATGGGCTCTCGCGGCCTCC
TCGCCCGTGGCGAAGCTGCGGAGCCAGTACAGCTTGGCTCGCCGCTCCGGGGCCCGGATC
TGCGCGGAGTACCTGCCGCTCCGGGGCTGGCGGGACAAGCCGAGGGAACCCG