Map Locations of contig_1575734 (3581 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1575734

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17144 1 547 bp MLOC_17144.1 Available Available None
MLOC_17143 1 667 bp MLOC_17143.1 Available Available None





CDS Structure of MLOC_17144






CDS Structure of MLOC_17143






Contig Sequence (3581 bp)

>contig_1575734 3581 assembly3_WGSMorex_rbca.fasta
CCCCCCGCACCCCGCGCGCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
CCCCGGCGACCAGCGCCGCCGCCGCCGCCGCCGACCGGTCCGCGGCCAGGCAGCAGGGCG
CGTGGAACGGCGCCGCGCAGCCGCTCGTCACCCGAGAGCTCTTCTGAGACGACGAGATCT
CGCCGCCGCGGTCGATCGCGCGGGGGATCTAGTTAATCCAAGTTATTAATTAGGAGATTT
CAGGCGGCGGTCGATCGTGTCAATCAATTAATCAATTGGCAAATCAACCAGTCCGATCGC
CGGGTTAAGATTTGATTTGGTTTGGATAGCACTAGTAATTAGCGGCCCTAGTGAGATCGT
TGGTTTGGTTTGGTTTCCGGTTGATTCGTTTTTCTTTTCTGCCTTTTTTTGATCGGATCG
ACGACGACGAACAAGACAGAAACATGTTAGTATAAGAGATAAGAGAAGAAGAAGGAGCAA
ATGGCTGTCTGCTTTTTCATGGACGGCGTGTACCCATCCACCAAACCCCTGCCGGTTGTT
GGATTAACAGCTTGTTGATTGATTTGTACTACTGCTGCTACGTACCACTAATTGTTGATT
GGTTGGTTGATGGAGGAAATTAATGAAATCTTTCATTCACATCTTTTTCACATTCTCTTC
CCTTCTCCAACAAGTGTATTTGGAGCCATGTCATTCTCCTCTTGTTATTTTTTTTATCAA
CTTTTAAGTGATAAAAGGCACGATTTAATTTTCCGCGTCGACGAACCCGATCTCTTTATG
TTTGCTGGAGTTTAATTCAACGAAAAAAAAGGTGACCCGGTTCGAAAAGAATGGGTTTTC
CAAGCTACTGCTCATGATGAATTTGCATCTTCTGAGAGCAAACATCTCAGCAACTTGTTT
AAGCGAAAGCAGCCCACCCACACCACCTCATTATCATACTCCTAAACAGTATACAAACAG
TTCCAGGACAGACAACCGTGCGTGTCTACGACGAGGCTGCAGGCCTGCTGCACACATGCG
CCTCGGAGAAGCTTTAATCAAAAGCCAATTAACTAGTCCGCAGACAAAGGTGACGGGCCA
AAGTCATGGCGAGATCATTAGGAGATCTGATTAGACCACCTGCAATCCAGCTTGATCAGG
GCGCCTTGGACCGAGTTGTTTTCGACCGACAGTTGATCCGCTACGCCATCCGCGGCCACC
AAAGTTTAATCGGCAAAAGCTTCCGCCTTTGCCTTTGCCTTTGCTTTTGCTTCCGGCCTT
TTCGTCAGTTCCGCTCGACCGCAACAGGTCTCGCAACAGCTTGTGATGTCGATCAGTGGA
TGGAAGAGGGAGGGCTGGCCTAACTAGGTGACGGCAGGATGAGTTCAGATGGCTGCATGG
AATGGAACGGCAGCAACTCGCATGATTTGCTGGCTTCTTGTTAGGCTTTGTCACTTTACA
CTAACTAGTACTAGTCAGATGAGGAAACGTGCCTATGGGCCCCGGTTGCTAACATACGTG
TGCATCTCACCATCAAAGGGCAAATTGATGCCCGCCCTCGTTTTGTTCATGATTTTCTTT
GAAAAGGATCCGAAGGACATGGCCAATGCATAACTTCAGCGTGATGCATCGTATAACATG
TAGGCTCGAATGTCAGGAAAAGTAGATTCAGATGAGGAACCGAGATCCATTGTAGGAGGC
GGGTGCTTGAAGAGAAAAAGCATGGTTCGATGTAAAAAGCTAAAAAAAATAATGAAAAGT
AGATATGCAAGTGTATTAGAGTCTTTATTTTATATTCTTTAATGATGCCCACTGATGATA
AATTGCATTGGAGAAAAACAATCAATATACATGCCTCAACCTACTTTATATCATGGGACA
TCTGTATCCATATGTCAACATTGTACATGTCCTTAGTTCCTCTAACCTGAATTAATTGAC
ATGACTTTAGCATATGTCAACATTGTACATGCCCTTAGTCTCTCTGACCAGTGTGGTCCT
TCGTTCTTTTCAAGAACAATCATTTATTTAGATATTGCTACGTTTTTATTTACTCCTCAT
ATTATCTTTGTCTAAAGTCAAATTTTACATACTTTCAACAAGTTTGTAAAAACAAATTAA
AAACATACAACAAAAAATTAATGTCATTGGATTCATCGTTGTATATACTTTCACATCATA
TAAATTAGTTATTGTAAATTTTTGTATTGTTATCTACAAGCTTGTTCAAACTTTATAATG
TTTGGATTCGCTCAAAGCTAATACGAGGAGTAGATAAAAATAGAGAGAGTATGAGATAAT
AAAAATTGGGCACGACACACGCCATATTTATTACCACCACGTAGTAATTAGTTTACGCAA
AACACCTCATAAATTCATTTCCTCTAATTTGTGGCCCTTGTCCGCTACCTTAGCTGAGTT
ATAGCGTTGAGCAACTCACTGCCTGCATATTCTGAGAAAATGCTGACCATTAATTTGATC
GATAAAATAACATGTATATGTTAGAAAGTGTATCATTAGATTCGCATTGAAGAGAAGTTT
CATATGGTACAATTTTTAGGGTATATAACTCCTATTTTGTTAACCAAAACAATAGCAAGT
TTTTCAATGGAAATGCGTGTGACACTTATAAACCAAGATAGAGAAGTATTAGTGGATTAC
CTTCCCTTCCCATCGACGACATTTGGCTCCTGGATCCAAAATATAGGAGCCCGCAAAAAC
GTATTATATTTTGGTATGGAGGCAGTACATTCTTGGGTGACATGGCGATTTGCCTCCCGT
GTCCACATCCTCATGTGATGAATAGTCAAATGAAATATCAAATCTTTTTGGCATGCAAGA
TGTTCAAATGTCTGATGCCCATATCAAATTTGATGATGTTTAGACATTTGAGTAGCTATG
AGCAAAACACAAAACACAAAACAAGTATTTGAAAATGTTTGATAAAATGCACTGTTTAGA
GATCCTTTTTTGCCACGACCTCCTTGAATGCCATGCACGCATGAAATTTTCCATGCACCT
AGAGCACTCACATCTTGCATGGAGAACAAAATCAGACTTTTTAGAATTTGTTTTTTTACT
ATTCACCCGAAGGAGACGAGCTTAGGCTCAGAGATGAATTAACCTTTTTATGCAATTTCC
TCTTTTTACTTCATCTTCTTTTACGATGTTCCGTGCTCGTCATTTTTTCCCTTCTTTCCC
TCCCGGCATTGGTTCAATATTCATGCGATCACGTTTCACTTTAGCAAAGCTACAACTTAC
AAGCCACTTTCTTATTTTTGGAATTTCTTTTTCACGATTTTTTATACCACTAGAAAAAAT
AATATGTAAACTAAAATAAATGTTGGTGCTACTCATTAAAGATGTTTCCATAGTATCACA
AATTGATCCTTACCATACAAAAAATATCCATGTATCACAAATAGATACATATTTTGTTGG
ACAAAAAACATTGCCAGATTTTTTTTTGAGTGAACTTGCTCTCCTTAGAGCAACTCTAGT
AGATCCCGCATCCCGTCGGCCCGCAAAACGCGTTTGCAGTTCGCGTAAAATCCCTTTTGC
GGGCCGGCGCGGGCTCGCATGGATGCAGACCCCCCCCCCCC