Contig Data
morexGenes
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Map Locations of contig_1575559 (3428 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1575559

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17089 2 1607 bp MLOC_17089.1 Available Available LOC_Os03g06200.1, FRAME:+3, EVALUE:0.0, 13103.m00675 protein aminotransferase, putative, expressed





CDS Structure of MLOC_17089






Contig Sequence (3428 bp)

>contig_1575559 3428 assembly3_WGSMorex_rbca.fasta
TCTGCACCGACGGCCGCTCCGCCCCGGGCCCCCGCCCCGGGGTTTCCGGGCGCCGCGCGC
CCCCCCGCCGCGCCCCNACGCTCCCGCTCTCGGTCCTCCAGAGGGCGCAGGCGGAGCTCG
TCGACTACCGCGGCTCCGGCATGAGCATCATGGAGATGAGCCACCGGGGCAAGGAGTTCG
ACGCGGCCATCAAGAAGGCCGAGTCCGACCTGCGCGCGCTCCTCGCCGTCCCCGACACCC
ACGAGGTCCTCTTCCTCCAGGGCGGCGCCACCACCCAGTTCGCCGCCGCGCCGCTCAACC
TCTGCGCCTCCCCCTCGGACCCCGCCGACTTCGTCGTCTCGGGCTCCTGGAGCGACAAGG
CCTTCAAGGAGGCCAAGAAGTACTCGGCCGCCTCCGTCGCCTGGTCCGGCAAGGCCGGCA
AGTACACCTCCCTCCCGGAGGACCTCGGGGCCCTCCCGCAGAACCCGGAGGCCCGCTTCC
TCCACATCTGCTCCAACGAGACCATCCACGGCGTCGAGTTCAAGGACTACCCCGTGCCGA
CGAACAAGTCCGGCGTCCTCGTCGCCGACATGTCCTCCAACTTCTGCTCCAAGCCCGTCG
ACGTCTCCCGGTTCGGCCTCATCTACGCGGGGGCGCAGAAGAACGTCGGCCCGTCGGGCG
TCACCATCGCCATCGTGCGCAAGGACCTCGTCGGCGCCGCGCAGCCCATCACCCCCGTCA
TGCTCGACTACAAGACCCACGCCGACAACGCCTCGCTCTACAACACCCCGCCCTGCTTCG
CCATCTACATCTGCGGGCTGGTGTTCGAGGACCTGCTCGCCCAGGGCGGCCTCGCCGAGG
TGGAGAAGAAGAACCAGCACAAGGCCGGCATCCTCTACGACACCATCGACGCCAGCGGTG
GCTACTTCATCTGCCCCGTGGACAAGCCGGTGCGGTCGCTCATGAACGTGCCATTCACGC
TGGCCAAGGGCGCCGACTTTGAGAAGCAGTTCATCGCCGAGGCGGCCAAGGAGGGCATGC
TGCAGCTCAAGGGGCACAGGTCGGTCGGCGGCGTGCGCGCCTCCATCTACAACGCCATGC
CGCTCTCCGGCGTGGAGAAGCTCGTCGCTTTCATGAAGGACTTCCAAGCAAGGAACCCTT
GATCGGCCATGATCCTCTGGTATTGCTCGCTCTAGTAGGATGGCTTGTTGTTGGTCAGTA
ACATAAGTAGGCTCTGTGCAAGAGCTGCATCGTCGTCTCCCATTTGAGGTTTCCTATCCA
TGCGTAGTATTAGTATGGTAACTATATTTTGCAATGCTGCTGCATTTTCCCACGATTGTG
GGACTCTTTTCCATTGCTCACTTTTGAGATTGGAACATGTTGTATTGGGGAATAAAGGTT
GATTAATAGCCAGTTGTCTTCACATCTTACCTGATTCTTATGTATGGTTGAGAGTTTATG
TTGGATAGACCAAACTCAGGTTTGGTTGCTTTTGTGATCTCTAAAACAAGCAAGTTTGTC
GATCATCGTCTCCTGAGGCACTTGCTGTTCTTGTGATCTTGGTAGATTTTTCAGGGTGCA
GCTGTGGAAGATTGGGTGCACTCTTTATGTATCCATTTATGTGAATTTTCAGACAGACAG
GCCTATCATGTGGAGGACCAAACACAGACCGCACTGCATCGTTACATATTTTTGGGATTT
GGAGGTTGGTGAGCAGTAAGCTCCAGAGAGTTTGGTGATGAACTGGTATATTTGCTGGTT
CCAGTGTCCCTGTCTGTCTTGGCTCCAAAATACAGATGTGGGGATGTGACAGCGATTTGG
TGCCGGCCAAGGACCGAAATCACTAGCAGCTCTCAAGCGACCCTTCCCCGTAAGGCCTTG
TTCGGTTAATCCCTTCCAGAAGGGGATTGGAGGGAATTTAGGTGGAATTTGACTTGTAGG
TATTTAATCCCTCTCAATCCCCTCCAAACCTCTTCAAATTTAAAGGAACCGAACAAGGCC
TAGGGGGAGCTACATGCACCGGGCCGGGCTGCTCTTTTTTCTATGTAGGCAAATGTTCTT
GCGTCAGTCCTTTGTTTTGGCTTTTGGTTTGAGTTCCTGCAGTGAAGCTGTGAGTCGTTT
GATCACTTCATGTGGGTTTTCTTTTCACGAGTCACAGCTTGGAGGAAGTAGTATAATCTT
CAGAGGCGTCAAGAACCTGAATTAGTGCATCTTTTGCTGCCACTTGGTTAGCACAATGCT
ATCCTTTTGTGAGTAAGAAACAACAATAGTGGAGAATGGCGTTTTGACACCCGGGCTCCA
TGAAAGCCGAAATTTTTGAAAAAAATCAGAACTCAAAAATTTGATTTAAAAAAATCTAAA
AAAATTGTACAACAAAACAAGTGTGTGTGTAAAATTTCAGGCCGTAAAACTTTGATACAC
GGCCTGTACAAAAAAGACATGATATGGAGAGATGAATAGTGTCATGTGTTAAAAGGCTTT
AAATTTGTCTTTTTTACATAACCCTCATTTCAACGTATTTAGTTCTGAAAAATTACACAC
TTGTGTATTATACCTTCATCTATCTATGTGTTTTTTTTCAGAATTTTTATAATGTTAAAA
TATAATTTTTCACAAAAACTGAAGTTTGCATTTGGAGGCCTCCATGAAACTCAGCCTCCA
AAAGCAATTTCCACAGTAGTGGCCAAGATTTCTCTACTTCCGTTCACAAAACCATATGTG
CATCCAATCATGTCATACTACTACTACGCACCAAAAATATTACTCCCTCCGTTTCATAAT
ATAAAAATATTATTTTACATTATTGTAGCGTTACAAACGCTCTTATATATTAACCGCTAT
ATTTGCTCCCAAGCTGCATAAATGATCTCTTACAGTATCTTATACGAGGTCACCAGCATT
TTTGCACACACAACTAGTGTGGGCAGCACATCACAACGCAAAAGGAAGGGATGGTTCAAT
TTCATATAATCTCATAAGCAACGCTTGTTTGATGATTGTCTCATTCTTTAGAATCTTGAT
TACAGTGTTGCTTCAATCCTTCACGCGGAGGAAGGATTCCAACAACACGGGCGATGTGAA
TCTTCTTTCTGATGTACTCCTCATAGTTCTTTGGCTTGTTAATCTGAAAAGGAAACAAGA
ATAATTTTCACATTATCTTTTGAAAGCATGCATAATTAACACTGCAATGTTTTCTTTTAT
AAAAGCAAGTATAATAAAGCTGAGTCAGCTGACTATAAGACATAAACTAGTATATTTTTG
TTTAGTTGAAGGAAAGAGAAGAGAAGAGAGAAGGTAAACGGGAGCTAGCTCTAGCACGTG
CTCTTAGACACTTTGTGAGAGTGAAAGGTGGGCCATATAATAAAATTGTAGTACACCTTT
TTAATCAACTATTGTATATATTGGCTATAAGATGGGCTATAGATGACATGACAATGACTT
ATAGTCAG