Contig Data
morexGenes
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Map Locations of contig_1575479 (3352 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1575479

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17066 1 940 bp MLOC_17066.1 Available Available None





CDS Structure of MLOC_17066






Contig Sequence (3352 bp)

>contig_1575479 3352 assembly3_WGSMorex_rbca.fasta
CAGGAACTCGTCATCTGGTGAGATCCCCTCCCCATGNNNNNNNCCGTGTGCCAAGCACCG
GCAAGAATTTTTGTTTTGTGGGGATTTGTTTGCTGATGAATGAATGTGATCTGTGGGGAT
TTGTTTAGAAATAGACCTTCGGACGGTAACTACGCGATCTGTGGGGCTCATGAGGATGCT
AACCACATTTTATTCAATTGCCACCTCGCTCATTTTGCTTGGAGTGCGGTCCGGGAAGCC
TTTGGGCAAAACTGGAGCCCTCACTCCGGTAGGGAGTTGCGCGCCATTCTCAGTGTCCAT
AGGGGTGGTTTCCATAGGATTCTTTGGCTTGCGTAGGGGCGCTGTTGTGATCTCTTTGGA
CCACCCGTAACAAGATTACTATCGAGCAAAAGTTTCCTTCACATACTCCCACATCATTTT
CAAATGCCATTTGTTCCTTCACACCTGGATGTCGTTGGGGAAACGACGGGGCACTGAGCG
GATGGAGGAGGCCATGGAGCGGATCCGCGCTATTCAGATCACTGCTCGTCATTGATCCCC
ATGGTGTTTTGCTGGTTTTGGACTCCTCCCGGCCAGCAGTTTAGGCTGCTCCTAGTTTCT
TATCACGCTACGGTCGGTTGCATGTTCTAAGACTTTTGGCTTCGGTCGTGTGTGTTGTTT
TCCGTACCGTTCCGAACTTGGACGCTGCTTGTTGGTGGGCTTTATTAATTTAAAGCCGGA
CCCATCTTGCGTCTCCGTTCTAAAAGGTCTTATTTGTACAAGGCAATTATGGACTCCTCT
ATCAAAATTAAAGGTTTGAAATCTAGGAAGACAAGATCAAAGACGATATGAGAATTTATG
GGAGCTTTCAGCGGATGGTTAAGGCAACTAAATCTAGGTTCTATGAGCAATAGATTTGCG
GTTTTGCTAGAACTCATCTAGTTGAGTTTTTACCTCTCATTCACCTTTTTATAACCATTG
GATGTGATACTTTAAGATGCATGTGTGCTGATGTGGTTGTATCTGTTTTTGTTTTTCATG
TGAATGAGACCAAATTATATCTCATCTAGATGAATTCTAGGCACTCTCATAGATTCTATA
TAGGTTTTGCGGAAGAATAGATTCGATATTCTGCATTGTGATATGCAAGGGAACTTCAGA
ATGTTGTCTCGAGGGTTCCGGGTTACTACAATCGTAATTTCAAGCTTTAAGAGGTTCAAA
CACATGGCGTTGGTGAGAAAATGATATTTTGCAAATGAAAATGTATGTTGTTTGGTTTTC
GTTCGGTTTTTCATTAATTAACTGAGTAATTCTCTTTTTCTTGATTAATTGATGAGACAA
CTTTTTCCTCTCCTTCGGAAAACAAATATATATTATAGTTTTCTATTTTGTGGGTAAATT
TATATTGTAGTTAGTCACTTATCTTATGAACATTTTCACATTCCAAGATGAACAGTGCAT
GGTTTGTCATCCAATTGTTCTCCCTTTTTTTGAGTGTTTGTGTGTTACATGCTTATTACT
ACTAAGAATTTTTTTACCAATATTAACCAACTAATTCATGCAGTATCAATCTATGTAGCA
AAAAACTCTTTCAACGTTAGTTGCTCTAGATTTTGTTATGTTTAGAAGTACTATTTTTGC
TCTAGATTTTTCTAGCTATTCCTAAATTAGGATGATATACCATTTCATGCTGAATTGTTC
TAGCATAATATACATGTTTTGTCACACAAAATTGTGGTACTTAAATATATTTTGAAGGTC
ATATGGTCTGCATGTTCATATCTTGAAAACATGAAATCTGTCACATGACCATAAATAATT
CATAAATCATGGGTTCTGTTGAGTTCTGTTTAGAGTTCCTAAATCTGGCAGTGACTTGAT
GAAACCAAGTCTCATTGTAACTTAACCTTCTCTATCAGTCATTTCATATAGATCCGGCGT
ACCAAACTGATCCAAATTTTAAGGGAGCTGCTACGCGTCAGCCGACGGATTCTTTAAAAA
GATCCGCCACCTCCTAAGTCGTCGAATCTCATGAATCGAGTGACCGAACGTCATCATGTA
CTACTGCAACATAGGTTGTGTTGAGGAAACATGGGTCATGTTGCAGATTTTTTTACGACA
TAGATCAAGTTGCAGATTTTTTTTATTGCAATAAAGGTCTTGCTATAATTTTTTCTTGCA
ACAACAATCTTGTCAAAGAAATTTCTGTAATAGAAGTCTTCGTTACAGAAACTTTATAAA
AGTGAGAAAATTTACAGAAACATTTTACAACAAAGGTCTTGCCGCAGAATGATTCTGCAA
CTAAGATCTTGTTGCAGAAATTTGTATCCTTTTCATAATCGATGTCCGTGCGAACCGTGG
CCCTGTTTCTGGATAAGATAAAGATATTTCTAAGAAAAAATGGACACGTGGTAAACGATG
AAGGCGATTGACGCGTAGGAGCGATCCGCCAGTAATCATTTCCCAAATTTTAAACAATTT
TATTTGAAGTGTTAAGAAAAAATTGAGAAGAATCCAATTAATTATAAATGTTTCATTTTG
TATTCTGTGGAAAATTCAATTCATTTGGATGTATCATTTGTGAAGCTGCATCCAGCCTGC
TCAGGGGAAAAATTGATGAAGAATGCTCGTGTGAAGAACAGATGGCTGCTGCCACAAGTG
CAATGTCGAATGACAGTAAGCGAGTTAGCACCACTACATCAACGAGATACATCCCATGCA
GCGAGTCCTCTTATGCACGACTGCAAAAATTGGGAGAGAATTTTAAGCCAAACCGGTCGC
ATCCTAAAACAACTTGCATTTATTCGGCTCCAGAAGGATTTTCAAGAAACAATCAGCAGC
AGGATCCACAAAAGACAATACATGCACCACCCAAATCTGAACATTACAGAAACTATTTCA
CAGGAACATTGAGAACCCGGAAATTAGGATCATAGTCCAGAAAGAAAATCGCAAAAGGAA
ATATTAGTAAGATCATTGCAAGATCTAGACTGCAAGCAAGCAATTCAAGCACAAGTTATA
AAATCAACAGTAAATGAGCGCAAGCAAAAGCAAATTTACCCGAAGTTCACTTATTCATTA
CTCAATAATACTGCTGTACCAGCAACTGTTTAAAACCCATAGGTGACTCGATAGTTCATC
AAACAAACACGATAGGACTGACGCGAACAAGATAACAGTTCAAATTATCGAAACAGGGCA
CCACCCGCAGGACGAACCAGGATGTTTACTGACCACCACGGAGGCGGAGCACCAGGTGAA
GGGTGGACTCCTTCTGAATGTTGTAGTCCGCGAGGGTGCGGCCATCCTCCAGCTGCTTGC
CGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGAT