Contig Data
morexGenes
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Map Locations of contig_1575306 (3824 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1575306

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17022 3 2457 bp MLOC_17022.2 Available Available LOC_Os12g42160.1, FRAME:-3, EVALUE:0.0, 13112.m04426 protein kinesin motor domain containing protein, putative, expressed





CDS Structure of MLOC_17022






Contig Sequence (3824 bp)

>contig_1575306 3824 assembly3_WGSMorex_rbca.fasta
CGACGGCGCCGGCCTGATGACCACCTTCTTCTGCAGGCTGCGCCGCAGGTTGATCCTCTT
GCTCCTGCTGCCCTTGTCATTGGACATCACCGGAGGTGAGCTTAGTGGCGGTGACGAGTA
CTCCTTGATCTTGTCAAGGGGCGAAGCCGCTGCCGCCGGCGGCGGTGCAGGCGTCTTGGC
GCCGAGCGGCATCAGCGAGTTGCGGCGCGGCAGCGGGATGAGCGAGCTGCGGCGGGTGTT
GGCCGGGTGCTGGCGAGCCCCTCCGTTGCAGAGCGAGACCCTCCTGGCCCTCGCGGCGGC
GTCTGGGTTGGCGTTCTCCTTCTCCTCCGCCAGGGACATGAGCTGGTTGAAGCTGTAGGT
GTCCCCGTTGTTGTTGCTGTCCGAGAACGGCTGCTTCGCCATCATCCCGAGGTCTTTTCT
GGGTGCTGCGGATGGCGGCGGCCTCTCCGCGGTGGCGTTGAGGTTCCTCTCTGACATGGG
GCTTCTCAGGTGTGTGTTGCTCTCTTCCATCTTGAGGCTTTGCTGCTGCTGCTTTCGCTC
GACGTCTTGGGCGATCTTGTTGTCCACGTGCTGCCTCGCTATCTTCCTCTCAACCAGCAG
CTGCGACTCCAACTCCTTGATCTGTACAGAAGAATGAGAAGCAACGAGAAACATATTAAC
TCTTCATGCATAGCAGTAACAAGACAGCCTGTACTATTTCAGCCATGGTAGTTACAAGTT
GGGATGCTGGAAAATGCTTGAAGTAGTACCTTGTCTTGGAGATTCATTGTGAGCAGATCC
TTGGCCTTGTTCTTGGCTTCAAGGGATTGGATTGTTTCTTCCATGCTCTTGATCTGAGCA
TCTTTGCTCTTGCAATCCTGCTTGGCTCTCCCAACCTAGCAGCAGAACCAGAAGCATGCA
TTCAGATTAAACATATGGATGCCAAACTCGTACTCAAACATGAACTAACAGGGAGGGCAA
TAGAGTAAGTACCATAAGCTTATATCTTGACAGTTCTCCAACATCAACTTGTTTCCTTGC
TTGCCCAAGCTCTATCCCCCTGACCCTGCTCGCAAAGTTCAGCGAGCAGAGAGTTTCGCC
CACGTCATTCTCGTTGGGGCTAATTTGAACAAACATCAAAGTTTTGGAGTCTCCACCTGC
AGTGCTTACACACATTATTACAGGAAACCAAAGGACAGGTTCAAATCATACTAGCACAAG
TGAGGGAAATTGCATACTCAGTGAGTCTTGCAGCAAGTGCGTTAGCTTTGAATTCCTGCA
AGTTTGAGAAATAAATATGTTAGTGAAATCTTATATATAAATCACCAGTACAAATTATAA
CCAAGGTTTGGAAGTTTCAAACCTGAATGGTATATGCTGGCTCTTAGTTGCAAGAGCAGA
TATGACATCTCCAAGTGCAGAAAGGGACTTGTTAATATTCTGTGCTTCTTTCAGTCGTTC
GCCTTGAGCATCTGTCTTTGCCACACGCTCACTTCCGGCTAGGTCAATGAGCCACAGCTT
ACTGTTTGTGCGCTCTCCATTCATCAAATTTTCTCCTTTGACCATCACACAATGTATGCT
GAATGGAGAATTAGTTAGGACATGATTTTACAATGCAACAATCCACTACTTAGCGCAAGT
GAATGGGGAACCGGTGAAGAACGGTAAGAACAATAAGATACTGACCAGTGTGATCGGCTG
CTGTGCTCGTTAGCATTTGTGGAACCAACAACTCTGGCTTTGCTTCCAGTTTGCAGGACA
TCCCAGGCCTCATCCATGTTAGTGACTCGTGCTTCAACCAGTCCCGGTACATGATGAACT
CCCTCTGCAACTTGCCTTACTTCTAGCCTGTGAACAAGGTATCATGGTATACTGTGTCTT
GCACAATCTTGACATTCTTATCGTGTAATTCACAAGTGAGAAGTGGCATACCTTTTTGTT
GTTGTGCTTGGTTGGGACCCTGTCAGGAGCAAATCATGAATCTGTTCATTGTACACCTCC
AAAGCACTGACAGTAATCTCGTATTGGAAGAGGTCATGTCTGTCCTTGACTACTCGAAAG
AGCTCATCTAGAATTCTGTAGTTAACCCCTCGAGCACCTTCAGTTCCTTCCATTGTAAAT
GTTTTACCAGTACCGGTTTGCCCGTAAGCAAAGATACAAACATTGAACCCATCCAACACC
GAAGTTGCAAATGGGGCAGTCTTCTCAAACACTTTCTCTGTATACAAGTTGAACAAGATA
AATTGTTAGAAACATGAGGAACGGTGCAAGGTGAGTAACTGCATCTACGAGTGAATTACC
TTGGTCTTCTTCAGGGTTGAAGACTGAATCGAATTTAAAGACTTTCTTCGATGATACATG
GCCCCTAACAATGAGCTCTCCATCTTTTGCAGATTCAAAGTCTATCGCCATTGAGGCTCC
TTCTGCTGTTTCTTCCGTGTTTAGTGGCCGACAGCGGCAGAACACTCTTATGTTACCTAA
GCAATGTGCAAGTTGCGTCAAGTCCTATTGTCAACATTTCTGGCAGTTACAGCGTATAAA
CTGACAACAGAATAAAACAGCTAACCTTTGAGCTCTATAAGCTTGTTGTAAAGATCTTTG
CGTTCCTTTGCTTCCTCACTGAACTTCTCTTTCAGGTCCTTAAATTCAGATTCTAAACTT
GCATATTGGCTCACTGTTGAAATGAAAAAAGAAATCATGTTTGTTGCCTTTAGTTGGAGG
TGGATACACGCAAGAAAACTGAAGAGTGCACAACTAGTTCAGTTTGGTTAACCACTCTGC
AAACATACCATATTGATGGATTGTTGTAGTCATCTGCGTAGCATCTGACAAACACTTTTT
GTAGTCCTCTGATTCTTTCAGTAAAATCTGGTGCTCTGTCTTCAACGCCTGCAGATCATC
ACAACAAAGTTTGTGAGTCCATTCACTCTGTCAAGCTTAGGAGTGTACTGTAAAAACAAA
CAAAAACTTGAGGCCAGATATATAGTTACCTTAAATTTCTCACTGAGGTCTTTCAGCAGT
TGGCACCAACGAGTCTTCTCCTTCACTTGCCCTTCCACCGCAAATGCTGCATGAATAACA
AAAGTTTCACAAAATGTTCCCAATCAGCAAGGGAAATCCTAAGCATGCCAATTCTAGTTG
TAACAATTAGCAAGACCAACAACATTGTTCGATCACACAAGAAAGAACTGGTAAAAGTCA
GTTTGCTGCAACTGCCACTGCTGTGGATTTGTTTTGATCAGCACAGAGGAAAGAACTGGT
AAAATAAGTCTGCTGCAACTGCCACTGCTATGGATTTGTTTGTTTTAATCGCAGAAGAAG
ATAGAACCGGTAAAATCCAGTCTGCTGCTACTGCCACCGAACAAGTGCATCTGCAGTCGA
GACAAGTTCTTCTTACCGAGAGAGCCGACGTGCATGGACTTGCGCATGAGCTCCATCTGC
AGGTCGCGCAGGGACGTCTGGGCCTCGCGGCACTCCTTGGTCTTGAGCTCGTTCTCCCTC
ATGAGATCCTCCAGCACCCTCCTGCACTCGCCCTTCTCCCTCAGCAGCGAGTCGTACTCC
TGCCTCAGCCGGCCACAGCAGTCGCCGCCGTCGCCCTGCAGCAAGCCGTCGCAGCGATTT
GATTTTGCAATGGACACCAACGACAGCAGCGGCGGCAGGGGAAGTCTGAAGCGAGGTATG
AAGCTGGTGCTATTACCTTGGCAACGACGTGCTGCGCGATCTGACGGCCCGCACCGGTGG
CCTCCTCCTGCGCCCCTCCGCCCGCACCGGCCTCCGGCGCGGCGGCGGATTCGGCGAAGG
CGGGCTTGGCGGGAGGGCGGGGCACCGCCGGAGGCGAGGGGGCC