Contig Data
morexGenes
Links



Map Locations of contig_1575170 (4712 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1575170

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16988 2 2448 bp MLOC_16988.1 Available Available None





CDS Structure of MLOC_16988






Contig Sequence (4712 bp)

>contig_1575170 4712 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGTTAATTATAACCAGGGAATATAAATTGAACAGTAACTAGACTTTAAA
TTTACCATTTGCTCAGGGTGATTAAGAATTCATAAGGGGATAGTCATGGGACTTGAAACT
CCTACTCAAGTCTATTAACATGGCATGGATTGGGAATTGAAAGGAAATTGTTTCACGGTA
GCTTCCCCACATCTAGTCTCTCATCAATTCCCACAAAGTAAACTTTTATTAATTCTTATC
ATGCATTAAACATGAGATTGGGAGAAAAAAAAACTTATCCCATGTCTAATCTCAATACAA
CACCCTAATCTAAACTTTCATTCCCCTTCCAAAAATTGCCAAACACCTACTGTGGAGCCA
TATTCGTTTGCCCCCTAATCATCATGTTGCTTGTTAGTAATGGGATCCTAGGGATCTCTG
GACAATTCATGCTTACAGTGTGGATCTCTTAGGCTATGTTGCGGTTATCCCCACCCCCGC
CAGAATCGGGACGAAACCCCACCAATCCCCATGGTTTTCATCCCAATTGGGGTCGAATCC
CAGTCTGGCTTATAACAGCCTTCGGTTAGACCCAGCCGAGATTAGTTCCCTCCCAAACTT
CGTGGAAATCACTAGGAAACAACCCACACGTCCAGCTTCATAGAACCAAACCTCGGCTCT
TTGTCGAAACGGCACAATTTCCCTCCCTCGACCTCTCTCATGTCATGGCGGCGACGGCGG
CAATGTTTGAGAAGAAGGGATAACAGCAACAAAGGACCATCAATGCCTCTACGACCCTTC
ACTTCCAATTCCGGCGCCGAGCCTACAAGCACCATCTGCTGATTGTTCCATCTTGTAATT
GTGACCAATTGCTTCCACTATTGAAAACACTTGTATTACTCGTGCGGTGCTGATGCGCTG
CTGTATACTGCTGCTGTATACTTAGAACCGTCATTGTATTAACCGAACAGAGATTAAGTG
AGAGGGATTAATCCCTCTAGTAGAATAATTATCAACACCAAAGGGTGTGGCCTTCAGGCT
AAATCTTCATCTGAATTAATTATTTGTTATTTCTTAGTTGCATTATAGAGAACTTACAAT
TTTCATCTGAATTAGTTATTTTTTGAAACCTTTAATTATCGTACTTCACTTAGTTGCATT
ATAGAGAACTTACAAGTCTCTCTGACTTGGGATTTCACAATACAATCACCCACACATGCT
TGGTTGGGCAAAAGAAAAAAACATATTCAACATCTAAGGGGAACTTCCAAGGATTTTAAT
AAGGAAACTAGCACAGGCCAACAACAGTTTCAGGTCTCAGTTACATTTTATAGCAAATTA
ACCCACATGCATTACCCAAAAAAAAAAACATGCAGAGCCAAAGGTCCCAAGCCACCAGTT
CTTCACAATCAGCCTCCCTTCGTTTTCGTGCTGATCCTCACAAAGCCCCTGTGAAACTAT
TAATTGGTAATTAGGAATGGAACCAAGCAAAACTTCAGGTCGTTAAGCCACTACTAACCT
GCAGTAAGTTCACAAAGAACTGCAGCAACATTGACAAAACAAAGGAAATTAATTTCTACA
TCTCTACACGCACAAACAATAACAACAAAAGGGAAGCCAAACACAAACCAAGACAGATAA
TACAAATGAAAATATCATAGTGCACAAAAGATAGATTGTTTAAACTATTGCATTGCATCA
GACATCCAAGGAAGGATCTAGCAGCATCAGCTCTCAAGCCTGGCAGGGCGAAAGCTCTTA
GGCGGCAACTGCGAATGTTTGAGAAACAAGCCTTAAATTTATCATCATTTGCAATGCAAA
GAAATATGCAATGAAATTCAACAAAATAAAACAAAAACAGTATAAATATTGGGATATTAA
CAAGGCTCAGACATCCAAGGAAGGAATTAGCAGCATTAGCTCTCAAGCCTGGCAGGGCGA
AAGCTCTTAGGCGGCATCTGCGAATGTTTTGAGAAACAAGCCTTAAATTTATCATCATTG
CCATATTATCTCCCTAGTTGACCAAATAATGCTGACTTATGCTATTAAACTAAATCCCTC
AGAGACCCGCTTAAAATCACGCACACAGATGATTCAAACCAGCTGCAAATGGAGATTCCT
GCATAGACCAAACCACAAAGGCTATGGTCAACGGAGGACACTTGCAGTGGAGAGAACCAG
CTGTTGTTTACAGTGTCATACGGCACTTCCTATGGTCTGAGAATCTTCACCGGGACAATT
TAAGAAACGAAATTGATACTACAAGAGAGATTTCATACTACAAACAGTATAGAAGCTGGT
GGTATTAAGCCTCAGAAAGCCGCAAAAATATCGTCATTTGATATCAGACGGTAATTCCAA
CATAAAGCTAATCATCATAGGCGTCAATTGCATTGTAGATATAATGCCGAAGGCAGATTG
ACAGATAAAAATCGAAAAATAGTTAAGGCGTATCATCAGAATATAAAGCCTTCTCATTCA
CAGGAAAATAGGCACTGTGTCAGAAGGTGTCCTAAGATTGTTTCATGGTTTCATCCCCTG
ATACTGAGCAAATCAGCAAAAAAAATGAAACAGAAAAAAACTAATCTCTGATGGACTCAG
ATGCAAAGATGACATCAATGGACGGCACAGGCCGGCCTCGGATCAAGTGTTGGATTATGC
ATCAGTAAATCCTCACGGTCCAAAGAGATCTTGTACAGAACAAGCAAATGAAGATCAGAA
GTGAAGAAAAATTGGAGGGTACAACACAGTTACTCAGTGGTGGCAATATTTAATTGGTTC
GATTCTGCCAGCGATGTCGTCAATGCTTTCAGAAGAGGGAGCTTGTTATCCTCATCGCAA
CTACGTCCTCCAATACAAAACAAAAATAACAAACATGACAGACGCGAATCCGGGGGAAAG
AACAATGAACAGCAGATTGAAAAATCAGGAATCGGATGGCTCAGTTCAGCGGGATAATCG
GCATACAGACCAACTCCTGAGAGAAAACCTGTGATTTGGTCTGTTGAGCTTGAATATTTG
CAAATCGTCACTGCCATCACCTGAATGAAAAAGAACTGGTCGGAAAGAAAATCGAACGAA
TTGCGAGATCTCTCAGCCCTGACCGTAATAGGTTGGGTGGTTTGGTGGAGGAGGCTGGAA
CTTGAGCTCCGCTCCGGCGGCGATGATGGGATCTCTGTGGATGGACGGGCAGTTATATAC
GGATGAATATCTGGGTTAGGGTTTAGATTAGAAGTTCGCGCTGGGTGGTGGCGGCGTGTC
TGCGGATACTTCGCCGTGGGCCGCGATTTCACTTCTACCTGCTCACACGGAACTTTTTGT
TTGAACTGGGCTTGGAACAAACTACAGATTTGTGCATAACCCTTTCAGTACAGCCCATAT
GGCAGCACTAGGCCCCTGGCCGGGTACGGAGCGCAATGGCGGCCTACGAGTGACCTGAGA
CCTCTGCTCGCCGCACGCCTGCAGCGAACTGCTAAGGGCACCTAAAAGAAACTGCTAAGG
GAAACTTTCGGCCGTTTGCATCCAGCCAACAGTTGATTAGGCCGGAGTCCAAATTTGCTA
CAATCCGCGTTTAAATTGTTATATTTGTTCATAAAAAGATTGCATTCACGTCTGGTTGCA
ATCCGAGTTCGTCGGATTTTTTCGCTACAACTGGTGTTTGATTTTTGCTACAACCGTTAT
CATTTTTTGCTATAACCGGTATCAATTTTTGTTACAACCATTCACTAAAAAAGCTGCATA
CACGTTAGTCACAGTTGCAATCCGAGTTTACCGGATTGTTTTGGTACAACCCACATTTTG
GTTTGCAATCACGCATCATCAGTGTCGTTTTTTTGCTACAACCACGTCGATATTTTTGAT
ACAACCATGTTTTTGCTGCATATGTGGCCGAAATTAGCTACATCGTTGCTTGTTTTTGCT
ACCATCAATGGTTTTTGCTGCATGGACAGATCTAACAGTCAGACAGTATTCGATCTGACG
GCTTGCTTGCGATCGGCCGAAAGTTTCAGACGGCGCGCCGTCGCAGATAAGTGCCCAATT
GCGAATGGTCGGCTCATTTCGAGGTAACAAGCTCCAACCACATAGTTGAATGTGCCGGAC
TCCTCGCGGCACTCGTTGCTTGAGTGCACATCCTTCATATGTGTGTAGGCCCTAGCGGAT
GGGGCCGTGATTGCAAAAATATGCATCTCGACGGAGCCCAAGGCCAAAACCTGGTTGTTT
ACAGTGATGGAGGCATTATTGCATGAGTCTTTTGTTTAGCTCTCTTTGATGTTGTGGGCG
ATCTGGTGGGCACAAAGACAAGCTATTCATGAAGGTAATTTCGAGAGCCCATAGGCCACC
CATGCTTTTGTTCATAGATATCTAAAGGAATTGGACATTGTGCACGAGATGAAGCCGAGA
AACGGAACAACCAACACAACGAACCAACAGGTTGTCCCTATTGCAAGACACCGGGAGCCA
CCTGACGGTTTTGCCAAGATCCACATTGATGTCGGTATGGCTAGGTGAAACAGAGGTGGT
TCTGAAGTAGCCATTTGTCGTGATGCAAATGGAAATTACATGGGCAGTTCATCCTTAGTC
ATCCTGGAATTTATGATGTAGCGACTGTTGAAGCAATCGCGTGTCGGGAGGCGCTCTTTC
TGGCGGACTCTAAACAGGTAGTCAATGACATCAATGTCGTGGGTATAAGTCTGACAGTAG
AAGTATGGGATACGAAAGTATATGGGCAGAGC