| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_1574562
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_16812 |
1 |
610 bp |
AK364738 |
Not available |
Available |
None |
CDS Structure of MLOC_16812
Contig Sequence (4629 bp)
>contig_1574562 4629 assembly3_WGSMorex_rbca.fasta
CGCGTTTTCTGCTCTCTTTTTTTTCGCGAGAGGCACGGTTTTGCCTTCGCGACCCGTGCC
TTTCGGAAAGAAAAAAAATATATTTTCTGCTTTTTTCTATCGCGCGAGGCACGGTTTTTT
CGTCTGCTTTTTCCCTTTTTTCGTGATTTTGTTTTTCATCAAAACCAATCAACATGGGAT
CTAGTTTTTAAAGATCTTGACGCGAGAAAGCCAACAATAATAACGGTTCGAGATTTGAAC
GCACGGTTTAGAAGATAAAACGTTTTGAAATACGCATCTACGAAAAAAAGGAAAAACTTA
TAGGTTACGACAAGTGCCACGCATGCAGTGCGCCACTTGTCGCAACCTGTGGACCGGGAG
TAATCGTTCGAAGAGGTACTCGCTAACTAATGATTTCGTATATCTCGGTAGCACGTATGT
GCCGCTTAATGCGGCAACTAGTTGGGGCCTCGCACAAGGCGCCCCCCGACTGGGCTGGCC
CAGCAGGGCATGTGGGTACTGTAGTGTGTTTCATAAAATGTTTTTATGATTTTAAATTGT
GAACAATATTCAAAAATGAAATTGTGTTTTGAAATTTCTGGACACTTTTTGAAACACAAA
CACTTTTATTGTGAACAAATTTTGAGAATGAGACTACTTTTAAACACGGACATTTTATGA
AAGTCGTATACAAATTTTAAAAAGGAGAACAATAATTGAAACACAAATACTTTTATGAAA
TAATGATTTTTTTGTTGAAAGCAGTAACACTTTATTAAATCCCTGATTTTTTAAACACAT
ACATTTTTGAAAAATCATGCACTTTTTTATATGAGTACAATTTTTTAAACACAAACATTT
TTCAAAATATAAAAACATTTTGAAAGAAATAATATTTTTTGCAATTCCATATTTATTTTT
GATGTACAAACATTTAAATAAATATTATGAACACGATATTTCTTTTTGGAATTCAGTTAT
TTTTTTTGAAAAATTCGAACAAAAGAAATATGAAAAGGAAAAAAGGAAAATGGAAATGAA
AAAATGAAAACCAAAATAAGAACTTTTTTCGAAAACAAGAATTTTTTGAAAAATTCTTGA
ACATTTTTTAAAGGTATGAATAGTTTTTGAAAAAACGCAATTATTTAAATTTTAGAATAT
TTTTTTAAAAGCAGAACCATTTTTGCATTTTAAGATCAATTTTCTAAAATGAAATTAGTT
TTAAAAATATAAGATAAGCTTGAATAAAGGATTAAATAAGAAACTGAAAACGAAAGAAAC
AGAAACAGGAGAATGAAAAGAAAACAGAAAAATCGGTAGAAAAACAAGAAACCGATTCAG
GAAACCTTCTAAAGTTCGCAAAACCGGCTGTCTAGACGAAACTGGGCCAGTCCATTGCGT
CACTGCTTGGTCGCCGCGTGTGCGAATGGGCGGCAGGTTGACGCGTTGAGCGGCGAATAA
GGAATTCCCTATATTTTGCTATATGCCAGACATGAGAGCAACTAATTAGCAGGGGACCTC
CAGGGTTCATTTTTAGTGCCACATGTCACATGCTCGGTGCTTTCTCTAGAATTGTTTTTT
TTTTGTAAGTGTTTCCTTTTGTTTCCTTTCAGCCTGATTTTTCATAGGTTTAGAATAAAA
AAATATGGATATATTTTTGTGCGAAAAAGTAATTGTGCTTTCACGAGAAATACAAAGTTA
TTCTCGTGTAAGCATAAATTTGCTTTCGCGAGAGGTACAACTGTGCTTGTCGTATTTTTC
TTTTTGTATTTCCATCAGTTATACAAATTTTCTTCCGCAAGCGCTTCTTGAATAAAATAA
AACTGTGCTTTCGCTAAAAGCACATATTTATTTTTTGTGGAGGCACAAATTTACTCTTTC
ATGAGAAGCCCAAGCGTGCTTCTTAGAAAGAGAAAAAGATATACCCTTCCTTGAAAGGCA
TATATTTGTTTTCCGTGGAGAACACATATTTATTTTTGCAAGAAGCACAACTCAAAAAAA
GAGAGTAAGAAAATGCTTCCGGCTCTACATTTTTCTTCCTTTTATGTCATTTTTTGATTG
TCGGTATTTTGGTTTTCGTTTTTTCTATATTTTTTATTGTTTACTGTTTTTCCTCTGTCG
ATTTCTCTTTCTTTTGTGAAAAAGAAAATTTGGAAAATATATTAGCATGAAATCTAGTTT
CAACTGGATGCAAGAAATCTAACAGCAAAAGCGGTTCATGATTTGAACGCATGGTTCAAG
AGATAAAATGTTTAAGAAAATAAATCTATGAGAAAATAACATAGATTATGATAAATGACA
CACATACAGATACAATGTTCCACTTGTCAGAGAAAATGAGAGTGATCTTTCGCTGAAGAT
AACCCTTAACAAGTGCTTTCATTGAGACATAGGCTGCGAACGACCCCTAAAAAAAGCGCG
AACGTTCAGGGTTTTCCATGAAATTTATTTTTTTTGAACTAGGTTTCCTATGAAATGCTA
TCCTTTTTTTCTTTCAGGCGCCTATGAAATGCTATCCAGTTCAAACAAACAATCAGGCCG
TAAAAGGCCATCAAAAGGTGAACAAGCCCAGCTTGCTCAGTTCCTCTTCTGCTTCTCTCC
CGTCGCTGAAGTCCCTAGTCGCAACTCAGATCTCCCCGTCCTCCGTCCCAACCCCTGCGA
GCTACCACAACACTGCACATCTCATCTGCTCTCCCCCCGGATCTCCAGATCTCTCGCGCT
CAAGCCTACACCCACCCCTCGCCCGCTACGACGTCGCCGCCGCACGCGGTGGCCACGGCG
AGATGCTCCGCCTCAGGGCGTTCCGGCCAACGAGCGACAAGGTGGTGAAGATCCAGCTCC
ACCCCACTCACCCCTGGCTCGTCACCGCCGACGCCAATGACCGCGTCTCGGTCTGGGACT
GGGAGCACCGCCAGGTACCAGCTCGAATTGGGCCCTCTTATACTTTTCGTCCCCATTTCT
TCTCGGCCTGCTAAACCAGCTTAGCAAGCTCTGTTTGCGATCGAATTGATCTCTACTTGC
TTTGGAATTGTTGGTGTATGGGTGGGTAGGTGATCTATGAGCTGAAGGCGGGTGGCGTCG
ATGAACGGAGGCTGGTTGGTGTGAAGCTTGAGAAGCTCGCCGAGGGAGAAACTGGTATGC
TTTGCAGTTATTCTGGTTGCAACGGCTTGTTAGGAATCACATAGGATCCTTATGCGCTGT
TAGAGTGGTAATGTTAGATTTGCTGGTTTTCTCGTTTGTTGGATCACAATGGACCGTTAC
TTAAATTGTTCAAATGCTTGTGTGTAGCTGATTGCCAGTAGTTGGGCGTGCTAGAAGCCA
TGATGTATGTGTGGAACTTGTTTGCTTGTTTGATTAGTTTCATGTAATATCATCGATTAG
TCATAGAAAAATGATAAACAACATTATTCTCACTCATTCATCCTTAAAAAGTAACAACAA
CGATTATTGTTGTATTGAGGGATTTGAGAGACTTTAGATTTACTATTTTGGAGCCAATAC
ATAATTTTGCTTTCAGCTATCATGCGTTTTAAGCTTCATGCACTAGCCAACACAACCAAA
AGTACGAACTGAAGGGCTAGGTAATCCACATATACACTTCAACACCCCCTCAATTCAACA
CGTGGATAAACTCAGAGGTATGACTCAAGGGGCCTATACATGGACACAAAGGGGGGAACA
ACAATTTTTTGGATAAATTGTGAAAACCAGGACTTGAACTCAAGACCTTGGACCCTGGTA
CCATATGCACTAGCAAACGACTTGAACTCAGACCTTGGAACCTGATACCATGTCACTAGC
TAACGCAACCAAAAGTCCGAACTTATGGAAAGGGCTAGGCAACCCACATATACACTCCAA
CAATGCATAGTCATTTTCTTTCTTGAATACGCATGTTGTATTAGAAGGAGAATGTTGAGA
AGGCGCAGTACAAGGAAAACCGGCGAAAAACCAAATAAACAAAAGAAAGGGAGATCTAGG
CAAGCCAAATCTAGAAACTATGTACAAAGGAAAGAAAGCCAAAGCAAACAGAAACAGAGC
AAAAAGGAGACCAAATCCTACGGCTGCTGCTCAAGGATGTAAGTCTGGTGGCTGTGTGTG
ATACACAGCACAAGTGCGTCCTCGAACTACAAAGCTGACGGAACCAGTCCGTAAACTCTG
AATTTTTGCTTGCTTACATCCCACCGCTTATGTGGTGCTATATGTGGACCAACTGACGCA
GCACGGCTAAGTCACTGTCCAGTCACAGGGATATGGTGCAAAAAAAGGGCAAGGCTCCTC
CATCCTTTGAGCTTATTCACTTGCGAAGTCCAGACCGAAGCACCCTCAAAATTCCTCTCA
CCTTGACCCTAACAAAACCCAAATTGTTGTGCTGGTAGGTTATATTTGCCGTGGAGCTTG
AGCCAAAGGCAGCCTTGGTGGGTTATGAACAGTGTCTTGAGCGCAGAAATATCATCTGTA
ACACAGTCTGTCAGTGGTATTTAGTTCTTTTAAGTGTTCGCCCTAGGCATGAGGAGCAGG
GGGATGTTAGCCTTCATGGGCAGGTGGTGCCTCAGAACGACACCTTTCGATATTTGGGGT
CAATGTTGCAGAAGGATGGGGATATCGATGAAGATGTGAATCATCGAATTAAAGCCGGAT
GGATGAAGT
