Contig Data
morexGenes
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Map Locations of contig_1574525 (8584 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1574525

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16798 2 2119 bp MLOC_16798.1 Available Available LOC_Os04g14690.1, FRAME:+2, EVALUE:0.0, 13104.m01362 protein flavin-containing monooxygenase family protein, putative, expressed
MLOC_16799 1 621 bp MLOC_16799.1 Available Available None





CDS Structure of MLOC_16798






CDS Structure of MLOC_16799






Contig Sequence (8584 bp)

>contig_1574525 8584 assembly3_WGSMorex_rbca.fasta
CAAGATACTAGATCACACTATATCGTGTTGATATAGTGTGATCNNNNNNNTTGTGTTGTT
CACCTACTTGTTGTGTGATATAGCTTAAGTAAATCTGTGTAACTTACTTGTGCTTGTTAA
GTAACTGTATTCCTTCTGCAGAGCCAATGAGCCCACATGATGGCCCCGGGCGAGAAACGG
CACAGGGGTCCTTGAGCCGGCCTACTCGGACGGACAACGGCAAGGCACCACTGAGCTGTA
ACGCCATCATATACGTCAGCGCGGCTACAGTGAGTGCGCTATTTATAAAAGTTAAAACAG
TGCTCTACAACAACATTTCTCTAGACCCAGGGAGCGAAACCAGTTTAGAGCATGCGTTTA
AAAACAGCTCTCCGCGTTAAAATTCGTTTTTTTGACGTCTGACAGTTCCAATAAAGACTG
TAAAATACTTTACGCAGAAAAAAGTTTAAGGCACACATTAAAAAGCCGATAATGCTAAAC
GTACGGACAACTTGTTACAGACTTTTACGGAATGGCAACGTAGCCTAATTTAATTGCCCC
CTGATTTTCACTGGTGGGGCCGCCGCCCTTAATCAATCTTTCATCGAATCACATCCAACG
AGCCTGTAAACCCTCCGTAGACGTCCGTATGTGTAGCATTACTCTTAAAAAGCGCTACCG
CAAGCAGCAAATTTGGGGTATTCAATTACGCGCACTTCATAATTTGCAGTGTATATTTTT
TAAATGCGCGTTTTGACATCTGAGAACAAATGTTGTCTCCGACGTGCTAAAAGTGCTATA
GTGATGTGTTAAAATTATTATTTTTGCACGAAACTTTTATGCGTCCGTTGAAGATGCTCT
AACTGCACAAAAAGTGCTACGCGTGCTGAAAAAATCGTTTATTGGACACCGGACCCTCCA
ACAGAGGCTGTAAAACTATCCACCAAACAATTTTGAGCACGCGCTGAAAAACGCTATTGT
GCGTAGCATATTTGGATCGTGGAATTGCACGCGCTTTACAATTTGCACTGTTTGCTTGGT
TGGACACGTGTTTTTGATCGTGTGCTAAAGCAATATGCAACCCCACGCATTAAATAAAAA
TGTTACAGCGATACGCTATAATTTTTATTGGACGCCAAATTTTGGTACAGTGCCGCACAA
GCGGGCCTGCAGAGAACTAAGAGGGATGGGATGCACCACGCCTATACGCGCCCACGGGCA
GCAGTGCAGGGAGGATGGCGACGTTCGCGCCGTATTGACGTGAGCATCTTGAAGGTGCTC
AACACGAGTGGCTGTGTTTCCGGCGTACGAGCGGTTGAAAGAGACGGCGGCGACAGTGCG
ACGAGGACAGCTCGTTCATATGATTATGCCACCAGCCCACCACACAGCGGCATGCCATTC
TCACCGTGAGTCCGTGGAACACCGTCGCACGCACGCAACAAGGTCTACCATGGACAAGAA
GAGGGTGGCCATCGTCGGCGCTGGCCTGAGCGGCCTAGCGGCGTGCAAGCACCTGCTGGA
GCGCGGCTGCCGGCCGGCCGTCTTCGAGGCGGACACCGTCCTCGGCGGCGTGTGGGCGCA
CGCGCCGGAGTGCACCAGGCTCCAGACGCCGCGGCCCATGTTCCAGTACTCCGACTTCCC
GTGGCCGGAGTCCGTCACGGAGGTGTTCCCGGACCACCGCCAGGTCGCCGACTACCTCGA
CGCCTACGCGCGCCGCTTCGGCGTGCTTGACTGCATCAGGTTCGGCCGCAGGGTGGTCGG
GATGGAGTACGTGGGCGTCGACGAGGAGGAGATGGCGGCGTGGGGGGACTGGGCTGGGTG
CGGCGAGGCGTTTGGTTCCGGGGACGGAGAGTGGCTGCTCACGGTGGCCGATGCCGACGG
CCTCGTGGAGGTAAGGATCCAACATAAGATGTTTGCACATACGTCCAACGGTGTATATAC
TGTGTGTATGCCCCTTGTTATGGACATGGACTTTTTGCTTCCAAGCTTATATGCTCTCTT
ACGAACTGTAAAATCCAAAAACAATAGTAAAAAAATTAAAAAATGATTTTATTTAGGTAA
GCTTTGACAAATGTTTTGCATGTTTATAAAATTTCAGCTCGGAATAACATTTGTGAAAAT
CATGACAAAAGAAAAAATCACTGCTCTAAAAATGCTAGTTTTTGATACATTTTGGACTTT
TGATTTTGTTTTTTTGCTAAGACTTTCACCAACGTTATTTCGTACTGAATTTTGATACAC
ATATAAAATATTTGTAAAAGTTTATAACAAAAAAAATATTTTTTTTTTAATTTTACTATT
TACGTGGGAGTATTTGATCTCGGAAGCAGAATAGGACTTTCCCCTTGTTATACGTTACAC
GCCACCATTGGTGCGCTCAGAATAGTGCACTGCACTGTTGCTGATATTGATTCGTTTGAC
TTTCATAGGATGATATATATGCTGCACCTACCAATTTGATTTTTGGGAGCGTCACACTCA
CACTGTCACACAGTCACACCACATAGAAGTGCCACCAAATCCAAAATATGACACGTGGCC
TTTGAAAATGATATAAATCAACATCTACATTTCTGTTTTTTCTGCTTCAAGAGATACTCC
ATGTACAGGGGAAAACACTAGGAGAAGGAACCAAAGTCTCTTTCTTAGTTTTTTTATTAT
TATTTGGATTTACCACATATGTCACGTGGTGAAGTCTTGTTTTTTAGTTATAAGGGGCCT
CGCCCCTAATTCATTCATAGAGAGAGATAGTAAAGGAATGATAGAAAAACACGGTTCCAC
AAATTATTACAGTGCTTCCACTTCTGTACCACCAACTCATCCCCCGGCATGCCAAAAAAT
ATATCATCCGGCAGCAATCATATACAAAATTAGAATATACCACGCGTGTTGCTAATTAAG
AGAATCGATTGCAATATATCTCAATGATACTTGATAGTATGGAACATAATATTTGGAACA
ATAATATGATCGAGATCGGAACATATGATTTATTGTACTTGAAATGTTGTATGGTTTTAC
ATTTTAGGGAATATAACTAGCATTATACAATGATAATTTTCATGCCTCACCCCTAATTCA
TTCATCATGAGACATACTAAGAGAATGATAGCCAATCACGGTTCCATGAATTCTTACAAT
ACGACCAATCCTCTGCCATCAACACATAACCTGCATCTTAGAATAAAATATCATTCGGCA
CCGATCATATGCATGCTTGCACGTTGGGAGAAACGAGTTAGTGAGGACCATATGTTTTTT
TTAACGGAGGCAAAAGCTTTGCCTCATCTATTAATTAAAAGAGAATAGGGTTTGTTACAA
ACAATCCAATTACACGACATGCGAATTACTCTCGCAATATTATGTACCCTAGTTTTCTAG
CACCGGCGGTGATCCATAGGTTGGCCTCAATCGCGATGGAAGCGAGCAGAATAGTTGGTG
GCGCGCTCTTATGCTTGAAGACCCTTGCATTTCGCTCGTTCCAAATAGTCTATAAGACAA
GCATGGTGAGGGATGTTTTTGCTTGCGTGAAAGGGGTCTTACAATACGACCAATCCTCTG
CCATCAACACATAACCTGCATCTCAGAATAAAATACCATTCGGCACCGATCATATGCATG
CTTGCACGTTGGGAGAAACGAGTTAGTGAGGACCATATGTTTTTTTTAATGGAGGCAAAA
GCTTTGCCTCATCTATTAATTAAGAGAGAATAGGGTTTCTTACAAACAATCCAATTACAC
GACATGCGAATTACTCTCGCAATATTATGGACCCTAGTTTTCTAGCACCGGCGGTGATCC
ATAGGTTGGCCTCAATCGCGATGGAAGCGAGCAAAATAGTTGGTGGCGCGCTCTTATGCT
TGAAGACCCTTGCATTTCGCTCGTTCCAAATAGTCTATGAAACAAGCATGGTGAGGGATG
TCTTTGCTTGCCTGAAAGGGGTAGCGCTATCGCAAATACTTGCCCACCAAACAGCAACCG
ACTCAATCAAGGGCCAAGCATTCATGTCAAGCCCGAGAATGTGATATTTATCAATGACCA
TGGACCATAACCTCTAGTGTAGCGACACTTGTAGAATAGGTCAGTTCCACATTCTTGCAC
CCTCTTGCAAAGAGGGCAAAGATCATAGTTTGGCCACCCTCGCTTCGCCAACCTATCAAC
AGTTCAGACTCTATCTTGCAGAGCCAACAAAGCGAAGAACTTGATCTTTGGAGGACCCCA
GGCCTTCCAAACCATCCTATTCATGGGCGAGAGGACCATTCCCATAAATTGAGCCTTGTA
TGCGGATGCTGCGGAGTAGAGCCCCGAAGCTGTGTGCTTCCAAAGGATGTCATCCTCGGT
TAGCTCATCGAGTTCGACCTCATGCAAGAGCATCCAAAGGGAGAAGAACTGTGAGACGTT
CTCCGCGGAGACGTTGTTGGGTGGTTTGATCTTGAGGATCCATGCAGTGTTTTTTAAGGC
CTCACGCAGCTTCCTGTTTTTCAAGGACCATGTGTTTGGATATATAGGATGTCAAACTTT
TACAGCCGAACAACAGTACAAACACCAAGATATAATCGATAGTAATCTTACGACCAGACT
ACACCCCGGAAACAGATAAGTACTCAAATAAACTATCAAATCATATTTGTTTTGTACATA
GGCCACATAACATTGGAAGTACGGAATTTTTACTCTCTAAGATGTTTCTACATAGGTACA
ATAACATCAACATTTCTACGAAAACGTGCTACACCAAGAAAACTGAAATCAGGCAATATG
TATGCACCAGTTTGGAAATGTAATGTGTATAGATCGGGTAAGGGATAGACAAGATTTTTT
AATACTCCCTCTGATGCATATACATCTAGATACATTCATTTAAACCACAAGTAATATGGA
TCGGAGGGAGTAGTATTTTGTTAACTCGGGGTACTTCTTTCTAAATATAACCTTCTAGGT
AAATGAAACAACATTCATAAATCAAATTGTCTGTGCAATTCTATATTTTCCCTTTGTGTA
AATGAAACAACATTCATAATTCTGTGTAAATGAAACAACATTCATAATTCTGTGTAAATG
AAACAACATTCATAAATCAAGTATTTTGTTAGTTCAGGTACACAAGGCAGACTTTGCGAT
CCTTTGTGTTGGGAGGTTCAGTGGTGTGCCCAACATACCTACATTTCCTGTTGGCAAAGG
CCCAGAAGTGTTTGACGGGAAAGTTGTCCACTCCACGGAGTACTCACAAATGGGAGGCAA
AAATGCTAGAGATATGATCAAGGACAAGCGTGTCACTGTTATTGGCTACCTGAGATCGGC
AGTAGACATTGCAAATGAATGTGCCAACGTGAATGGTACGTACACGCTGCCATATTTTTA
CAATAAGATTATCTCCTTTCCTCTTGCATGAATGTTGATATATCAAACTTAATTAGTGTG
GTAGACCTAAGAGTTACCATATGTAGACATTTTTTGCTTTCTTAAATGTGTTAATGTCTA
CCTTGATCATATTGTCTTGGGTTCTATAGTTGCCTCGATAAAGCTAAAATAGAAAGACTA
TGATTTTATTACCAAATGTTTATTATTGTTTTAGGTACCGAAAAACCATGCACGATGATA
GTACGAACAAAGAGTTGGATCATACCAGACTACTATGCTTGGGGCGTCCACATATCAAAT
TTCTATCTCACCCGTTTTGCCGAGCTACTTATTCACAAGCCTGGTGAAGGCTTTCTCCTC
AACATGTTGGCTACTGTCTTGACTCCACTGGTAGGGCTACATGTTATAATTTTTACCTAT
AATTCTAATTGAACTTGTTCATTTTGAAAGTTTAGATGGTTTTGTTTTTGATTTAACATA
GACAAGCATATGTTTTCCTTGTTTGTGTTGAGTAGAGGTTTATTTTCTCGAAGTTTGTTG
AGAGCTACTACTCAATTCCAATGAGGAAGCATGACATGGTGCCTGACCATAGCTTCTTTG
AGGGACTAGTGGCATGCGTGGCTGCCATTGCACCGAAGGATCATTACAAGAATATTGAGG
AAGGTAGCATCATCCTTAAGAAGTCAAAGACATTCAGCTTTTGTGAAGAAGGTGTGCATG
TTGAAGGTGAATGCACTCCAGTAAAGAGTGACATCGTTATCTTCGGAACCGGATTTAAGG
GTGACCAAAAGATCAAGGACATGTTCACTTCAAAGTACTTCCAGAGTAGAGTCGTTGGCT
CAACATCAATGACTGTGCCACTTTATAGGTAATCACCTTGCTATATATGCATAATATTTA
TGTAATTTAAACTTCTTGATTTCAAATAGTGTGTTAATTCCTTTTTTAGGGAGTGCATCC
ATCCTAAGATTCCACAACTCGCAGTCATCGGCTATTCAGAGAGCTTGACAAATATATATA
CAACAGAACTTATGGCCAAGTGGATATCCCATTTTATGGATGGTGGTTTCAGATTGCCAA
GTGTCAGGGAAATGCAAAGGGATATCCTTGAATGGGAGAAGTTTATGAAGCGCTACTCTC
GAGACTATTTCCGTAGATCATGCATTGGAATTGTTCATATTTGGTACAATGATCAACTAT
GCCAGGACATGGGATGCAACCCGAAAAGGAAGAACGGATTTTTCTCTGAACTATTTGAAC
CTTATGGTCCTTGTGATTATGTTAATCTTCACCCAAAGTAACAGTAGATCATATGTTTGC
ACTTCTATAGATGTTATCAACCAGATCTATCGTGTTTACATACCTACATGGTTACATGTT
ATTATGTTGTATGGTATCGTGTCCGAACCTGTTCCTAGACATTAATTGTAATCAAGTTGG
TGGTTTGTCTGGTCCACCAACAATCTAGTGTAGTAATATTCAATGTCAAGAAAGAAATGA
TATCACTATGAGGCACAATTATACCATTTAGTCGCGCGTCTTAGAAATCTCTTATTCAAA
GTATATGTATAGAATCATATCTAATGTTAACTTTTATTGTACATTACTATCAGTAGCTAG
TTGTACGTGTATTGCTATGAAACAATAACAATACATATGTAAGATTTGAGTGAGAGGAAG
TTTACTCATCTCAAATAGATAAAAATAATATAAACAAAGACCATGTGATCATTTGAAGTA
GTGTTACTCTCTTTATCCAAAGGAGTACACAGCCGTTCAAACTTGGTTAGTACTCCCTCT
GTCCCAAAATAACTGTCTCAACATTGTACTAACTCTCGTACAAAATTGTAATAAACTTAA
GACGCTTATTTTAAGACGGAGGGAGTATTATAGAATTAACAATAAAAATGTAATGGAATA
TAACTTAACAACATATATAGTCTAATATCCAAAAAAAAATGTAAGATGGTCAGATGCAGG
GCCACCGTCAGCCTACGTCGACATCCATCGGGGACTATGAATCGGGTTTTTACACTGTTT
TTACCTTTATAAGTAAATATAAGCACAAAATAAACTCGATTTGAAAAGATTTCACGATAT
GACCCTTTTAAAAACGTCAGAAACCGTGGCGTTGCTGCGGCACTTAGAAATGCCAGTCTA
CCGTGATGTTTTTGGTCCATATTCAAATGCCAGTCTACTTTGCGTTGCAGTGCAAATAGA
AACGCCATGTGAGTTTACGTTGCTAGCCACGCCCAAAACGTCATTGACAATGGCGTTTCA
GAACCCTATGGCAAGGAGTAGATGTGAGTGTGACATGTGCATGCAGGGAGGAGCAAAGAG
TGTCGAGCAGGTAGGCAATAATCACCTATGACGTACGGCATGCAGGGAGGAGCAAACAGT
GCAGGTAGGCAATAATCACCTACGCAAGCACCAAGCAGCAAGGTAGGTAGATGGTGTGGC
AGTGCAGGCAGCAGGGAAGGAGAGGCCGGCCGTATATATACTGGCAGCTGCCACCTGCCA
GCCAGAGTATGGGATCTTGCTCTCCCAAAGAGACTTTCCAGAGAGATATACGGAGGGAGC
AAAATAAGCTCGTCTTTCTCACTACACTCCAATCTTTCTCTCTCGACAGTGAAACTGAAA
CGGGTCTAGCTGCTGCGTGCGTGCCCATTCATACAGCATAGAGACAATAAGAAAGCAACG
TCCTGATGAGCTGAGCTTCACTGCTGCACTGCTCCACTGCATGGCCACGGCAGAAACGTC
ATGGCTGTTGGCGTTGCAACTATTGGCAGAAACGCCAGACTACTGTGGCGTTGCAGGGAA
ATAAAAACGCCACCGTAGACTGACGTTGTGGTGGTGCCAGGAAACGCCGCGTTAGACTGA
CGTTTTGCAGTGGGGAAGAAACGCCACGGCTTATGGCGTTTCAAAAAGGGTTAGATCATG
AATTTTTTTCAAACTAGGTTCATTTTGTGCAGAACTTCAACAAAAAGCTTAGAACCGTGA
AAAAAATCACTATGACTCGCCGAAAGAATCCCACACGCCCATGGAAAAATATCTACACTG
TCCTTTCCGCTGATGTCAGAGCTCATTACACCAAGCCTAGCTGACACTGTCGCTGCCGGA
AGAGTACCACCACGACCACACCACCACCTCCACCGGTCGAGCATACGTTAGAGCATGGTT
AATAGTATAGTGAACTGCTGGCTATAAGCAGTCTTATAGCCCATCTTATAGCTAGCTTGT
ACAA