Contig Data
morexGenes
Links



Map Locations of contig_1574369 (4830 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1574369

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16752 5 1492 bp AK248762.1 Available Available None
MLOC_16751 1 538 bp MLOC_16751.1 Available Available None





CDS Structure of MLOC_16752






CDS Structure of MLOC_16751






Contig Sequence (4830 bp)

>contig_1574369 4830 assembly3_WGSMorex_rbca.fasta
AGGAGGAGGAGGCGGAGGAGGAGAGTCGGTGTCGGCGGCGCAGGAGGAATCAGCGGAGGA
GAATGAAGGAATGGGGAACGGAGGGCGACGGCGGCGACGAGGAGGCTGAATCAATCAAAG
TCGCAGGCAGGGGAGGAAGGAAGAAGAAGCGGCAGCTGTGCTGTGCTGAGCTGCCCGCCG
ACGACAGATAGACAATGAAATGAAATGAAAGAAAAGTTGCTCCTTTTATTTCATATTCAT
ACTGCTGCTGCTACTAGTACTAGTATCCGACTGACTGAATCCACCACCACCAAATAAAAC
GAAAACGCAAATGCATATGGAAACACAAGACCAAATCCAAAGCCGTTTACACTGTCTCAA
GGTCAACAATCAATGGTGCCTTTTTTTTCTTTCCTTCTCTTATTTCCCCGAGAAAACGCA
AACCCCAACAACACGTACTACGTTCCTATATATGGACATGAAGCATGTTACTATTATGAC
CACATTCGCAGAGACTGAAACGACTTACACAAACAATTCATGGTCAACACACACCACTAA
AATTAAAGCCTAAACCAAATCCACCAAATATGCGACCACTCCATATCAATTCTCGGACTT
GAATCCAGACATACTCGTTTCACCACGACAAAAAAGCAACACAACCATCGAAAATCCATT
TCTGAGACCAGGATTGCTCACCCGCACGCGCTCAATAAAAAAAAATCAAAACAAATTGGA
TGGTAGATAATTTGTTCGCGCCAATGTTTCGACATCTAAACAGCTGTAGGCAAAAAAGAC
AAATCCAGGGCCTCTATTTTTTTTACTGTTCATCCACTGTTTTGATCCGATTTTGTCTTT
TTTTTCTGAGAGCTGCTGAGAAGTTTAAATGATTTAAAAATTAAAGCGTACCTCACGCAT
CAAATTCTATACCACCGAAAAACATTGGAATTTGTTGAATTTTTTTAGTATTTTTTTTAT
TCAGTGTAGGTGCAGATGAGCCTGGACATCAAAAAAACGTTGCACTCAACTTTCTTTCTT
TGTTGTTTTAAAAGGACTACTCTTTCGGTCTCTTCTTTTTTACTGTCACAGAAGAAACCC
TCTTTCTTTCTTGGTAAATTAATTTACTTTAGTACTATCTAAATAATTATAGTTAGAGAA
AACTAGAGTAGTTTTTCTCAACTACAAGTATTTAGATATAGAGGGAGTAGTTTATGAAAT
GTACTAACCTCGTCCAACTTTGCTAGAGTTGTATATATAGCCTACCAGTACCATGTGTGG
ACAAGTCAAATAATGCTTTGTTTTGGTCAGCTCAAATAATAATACCAGTAGTATGTGTTG
CTAGTACTCCAGGCAACAAGTCAAATCAGTGTCATTAGCTTCTTCTGCATTAAAAACATG
ATCATCGGATGGAATGGATGGATGGGATTGACCTGATCCATTCTAAGCCACCACCAACCA
ACCTCTTACCCATTCAATTCATTCCAACCCAACTACTACCACCCTACTACACACACACAG
ATATACCACATGGATAGTATTGCTGACTAGGCTGAACTGGACTCCTTTCACATGGACAGA
CAGATTCAAACTTCAAAACCAGCATCACCAATATTCAAACACAAGCAACAATTTTCTTCT
TACATCATCATGTATTAGTAAACACACACACACACAAACTTAATTCAATACAAACAACCC
CATTTTACTAACTACACCCACACACACATGGATGAATGAATCCCAGCCAAATAGTTTATC
TCTGCGATTCTCGTCACCGTGCGCTCTTCTTCCCTTGCTCTTACTCTACTCTATCCCCTC
CTTGACTGTAGACGGACGGCGAAACCCCACGAGACCTCGACTCGAGGGCGAAATAAACAC
CCATCATCCATCCATCATAAAAGGAAAAAATATCCTTGGCAACTGTGCATTGAATTTGCA
CCCTATCATTCAATGTTTTGCTACATCAGGGTGTCAACTTCCCCATGTTGACAGATTTCC
CAACCTTGGCAACACTATGCTAAACCCCAAGTTGGCGAAGAGAGTCAGGGCCCACCAGGT
ATATCCGTCTTCGGCTGCTCTTGTACCGGAACACCACCACGCCTTTGTAAGCCGCCCGTG
GAACACCGTCCTGGGAAACAAGGGCAGAAAAATCAGAACATGAGCCATCGTGTATTCAGC
TAAATTGCAAGATTCACGAATTAAACCGAGTTAACAAGGGACCTTCCATTCTTCAAATAT
TCCAAATTGACGAGCTATACGCTCGAAATCACCCTGGTTGTCATACTGAATCCTTACGTC
CACATCCAGATTGTGGGCCTTCAACAAAGCATCGGATCCATGCACAGGTGTGGCGCTAGC
CACGTCTTTTCCGAATTTGGTTAAAAACTTGTCCTGATGCCACCAACACAAGTATTAGGC
ACCCTCTTATGGAAACAACAACTTTCTCTCTGAAGAACAGATTAATAATCCTTACCTCCT
TGAGGTAGCTCAGGTCCTCGGAATTCCAGTCAATCTGTGACCACAAGAGGGGCCCAAGTA
AGTCTCAGGAACAAAGAGCTTATAAAATTTAAACACATGGGAAGATCTGCCTACATGAGC
ATCATTTAACTTGATTGGTTTCAAGTATTGATCGAAGAATTGTCCCATGCTTGATCCCTG
GAAAAGAACCATAAAAAAGCACGTGTTAAATGCCAGCAATCCAGAACCAATGGCTCAAAA
CATTCAAGTGCTAATCTGCTCGTCGTTACTGCAAACAAAAATGCAGTGATAAATTTGCAT
TGGTGTAGAATAGCCAACATACATGCTCGCCAAAGTTGTATGTTCTGCATACTTCTGGCC
GAATAAACTGTCGATCTCTGTGTACCTCCTTTAGCCTCACCCAGTCATCCCAATAAGTTA
ACTCTCGTCAAGGATGAAACAGATGATACACGGCAGTAAAGGAAAGCATATCTGCTAATC
TAAGAATCAGTAGGCAGCAGCAAGGATATGCTTTGGGCCACTTTGGTGACAGCTCCATCC
ATGTTGACTTCGTTAGCATCCATCCAAGCCCAGGAAAGAAGTCTGAACGGTAAAGAGCCT
CTGCAATGGGTTATGTAGAAAAATGAGTAATTATCCTTATTAATGTGGAAATAAAGTTGA
ACAGAGGCCTATAAGAATACTAACTTGGGTCATAAACAAACTGCTTTTGCCCATTGTCAT
TCCAAGAAGAAACAGCCATTATCGACCTTCAATGCCACAATGGCAACAATTACAGCAAAA
TAATTAGCACATTTGATATTAATGCATTGTCTTGGCATATACAATCAGAGTATAATTGTA
ACATACTTGTCACTATCAAGTAATTTTGCTGCAGCCTCAAAGTAGTCGAAGAAATCTGGA
GCGATCTCCATGTCATCTATTAGCCAATTAGCCATGGAAATATGAGATGGCATGCAGACA
TATCTAAGAACAAGACAGTCATAGAACCATCAAAAAGAGATCAGACCTTCCAGAATGATT
ACTCGGCGAAAATCATGCTTAATGAATAGCTCATCCAACGCCCATTTATAGTGGTCTGAG
TTAAGAAAAACTATGAGGACAAGAATCGATCATATCATCAATCCTAAGAAAGCACTCAAC
AATTGAGGACCACCTACTAGCTATCTTGTAATATGCAACGTTTTCTCCTGGTCTTTCAGT
GCGCACAGGCTCAAGATCCACATGCTGCAACACATCAAAGGCAAAAGGAACACTAACAAA
TCATTTGCTGGTAGCCTGGATTCTTAGAAAAATACTGGAAACGCTATTTAGAGAAGACTG
AAACTAGAAAAAAGTACAATCATCCAAATTCAGTAACCTCCCCCCACCCCCTCCCACTTC
ATTGCACCATTTCCTCGCCCATTGATGTTGTACCAGGGGCAGACCATTTCAACGTTTGGA
CCATTGACATCACTGCATCTGACATCCACGTACATAACCTACTTTCCCAGTACCAAAATA
ATCTAGTGCCCCCTTAAAAAGTGGCACATCAAGATGCCACAAGTGAACATGTCTCCTTGT
GGCTAAGCCATTTTGCTGTTGGATTAGTGTTGCTCCGACATTTCTCGAATGCTTCAAGTC
CTACCTCCATCTAGATTCGCTACCACCTCTCGATACAACTACAGCTTCTTGCTGGCCAAA
TTTTTATTTCAATTTTTGCACTTATATGTCTACTTGGTATGAGCAGTCATGCATATAGCA
TGTATCAGCTATGCTAGCGATATTACAAGAGAAACAGAGTTGTTCTATTCTAGCAGGCAA
TTAAGAAGCATAAAGCAAGTGTTTCTGTCAGCACCTGCATAAATGCTCGTATCAGCTATG
CTAGCAATATTACAAGAGAAACAGAGTTTGTTCTGTTCTATGAGGCAACTAAGCATAAAG
CAAGTGTTTCTTTACGCACCTGCATAAATGTTATTTGATTGTAACTTAAAGCTTTCTTTT
TTACTTCTCCATTTGTTCCATCCTGCGATTAGAAGAACCAATGTAAAAAAATTCCTTCCC
ACACACTTAAAGTGACTGAGAACAGGAACTGAAATTGCTATTAGCAGTACCTGTGATATA
AATAGTGGAAACTTTGAAGCAACTGCTTTCTGATACCTGAAAGAGTTACCGTCCATCATT
TATTTTGTCAGGAAGGGTGTTGTACAAAGCACAAACTGAAGCTACATGGATCTAAAAAGA
GCAATTAACAGATTAGGAAGTAATGTCTAAGTTTCCTCATTGATGCTGTCTACTCCCTCC
GTTCCAAAATATAAGTCTTTTAAGATATTNNNNNNNNNNNNNNNNNNNNNNNNAAAATGA
ATGAATCTACACTCTATAGTATGTCTATAT