| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_1574355
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_16744 |
1 |
1484 bp |
None |
Available |
Available |
LOC_Os10g29100.1, FRAME:+2, EVALUE:8e-93, 13110.m02486 protein MBTB44 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain |
CDS Structure of MLOC_16744
Contig Sequence (4815 bp)
>contig_1574355 4815 assembly3_WGSMorex_rbca.fasta
TTCTTCATGGGCCCTTCGTGGGTGGATCCCTCCATGGACTCGCGCAAATGTTACCCTCGG
TAGGCCACCTATCGGAACCACGCCAAAAACTCCATGTATTCATTGTGTTTGATCTTCCAA
ATCTACCATCCTTTATATTTCTTGCAAATGCATGATATTCACATTATGTTGCTTGATCTC
TAAATATGCATGTGTGGGAACTATTGGATGCAACTTAACTTGTGCAAAAATCTGTCTATA
ACTCAAGAAAATTAAAAACCGCTCATATTTCCTTTTAAGTGCCTATTCACCCCCACCCTC
ACCCCCCTCTAGACACCACTTCTTGAGCCCGCAGTAATGCGTTCGGTTGTGAGACGTACT
CGTCAATCTCACCTGTGACCTCTCGTAGGGGGTCTGTTTCTGTGGCGGACAAAGCTTTCT
AGTCATGTAGGCCTTTCTTTAGCTAGTGAAGCCATGGTTTCCTCGGTATCAACGTGTTCC
TAGGAGGCCACCTCTTCTGTACTATTTTCAAGATCGGAGAGCGAAAGTAGATCGGTTGTG
TAGACGATGCAATCTGATATTGTTTCATCAAGGAAGTAGTCCTCTGGTTCATGGTCGATG
TGGCAGTTTTCACAGACCATGTCAACGAACATATGTCTTTATGGAAGTGTTGATGTAGGT
TCTCTTTGTACGCAGTCCCTGAGTTCCTTAGTGCGGACCAAAAAAATTGTTGAGGTTGAA
CGGTGGGGTCACCGAAGTTGTGATCATGTCACGTGCCTCGCGTTGATTTAGAGGTAAGCA
TAATCGAAGATCGACGCGAGCATTGTTGGTGAAGGTAACGCTGCCGACATAGATTGCACA
TATAGGGTGGACTGGTGGGTTGATGTCGACCCGTCCCTCCTTGTCCGTGGTGAACATGAA
GGATCCAAAAGGCATGTTTTCCCACGGCGTAAGGCCACCGGAAACATATGAAGATTTGAT
CCAAGACCGGTCTCCACCCAGCGCCGCTCGTGCATGGCACGCCCACTGACGGTGCAAAAT
AACATCAGATCCCTTGGTAGTGGTCCAAACGTAGCTGGAAGTCTTATATTGGAGGTTGCA
CAGAGGGTTTATCCAGGTTCGGGCCTTTGGAGAGTAATACCCTACGTCATGCTTGCTTAT
GTTATTCATGGTGGATGGGTACCTCGTGCGAGGGGTTATAATGGTGTATGACATTGGTAT
TGAGAGTTGCTATATAAGATGAGATACCCTAGAGGGTTACCTAACCTTCCCTTATATAGG
CGAGGAGGTCTAGGGTTTACATGATGACAAATGAGATCTCGGGCGCCCCCACCCTGAGCC
TTGGAGGACACAAAGGTCTCTAATGTTCCTTTAGGGATTCTCCCCTACAACGGGTTGATC
GGGCCCCTCGTCGACCTAAAGGTCAGGCTCCTTTAAGTGGTCCACCCCGGTACTTGGCAC
CGTCACGAATAGCCTAAAATAGATATGTGAAAAAAAATTAAAATGTGTGATGGGAAATGA
GATTAAGTGGATGCTTACACCTGATGGAAAGTTTACAGTGAAGTCTTTGTATATGTTTCT
AATTAAGATGAATTGTGGCTTTTCATAGAAATTTCAATAGAAAATTAAGGTGTCTACAAA
AATTAATGTTTTCTTGTGGCTTTTGAATAAAAAGAGTATTTTAACTAGAGACAATCTGCT
CATCAGAGGGTGAAAAGGTGACATGTGTTGTGTTTTCTATGGCCAGGATGAGAGCCTTAA
TCATCTATTTTTTGCTTGTTCAATGGATAGAGTGATATGGGGTCTTCTTAAGTGTGCTTA
TTTGAATTCCATTCTACTCAATGTGAATGATTGCTTTGATAGATGGATTGGAACTTTCCC
GAAATTTGACAAGAGATTAGTTCTTTTTGGTGTTTCTACTCTTCTCTGGTCGACCTGAAA
ACGCCGAAACGACATTGTATTTAATAGAAAGAAATAATGTGATCTGATGACAACTATAAA
ACTAGTGTGCACTTAGATAAATGATTGGGTTGTGTTACGGATAAAAGACCCACATGCAAA
ACTTCTAACACTAGGGGCAAAAGTAGTGAGTAGCAAGTAAAGTTTACCCAGCATCGTAGG
GCTGGAGACTGGGTGTTCTTCGCATTGGCGGTTGATTATCTTCACTGGTGGGTGCCGTGG
GGATCTTTAGACTGCTCCCTCCCTATGTTTCTTGTTTCCTAGCTGAACTGGTGTGTGGTA
ATTTTTGTTTAGCAGTATGTGGCGGTCACACTACATTCTAGTTTGTTTCTTTGTGCCTTA
GCACTGTGGTGATGTGATGTAATATAATTTTGTTAAACTTGACGGTGGTGGGTTGATTCC
CCAGCTAAATTTGGGTATGTGCGTGTGTGGTTTGTAGTTCTTAAGACCATGTGGTTTCGT
TATTAAGTACAATTTGCTATACTTGCGTTTTTCACTTAAAATTTACCGATACACAAAATA
AATAAAAAACATACATGTCAAAAGAAAATCTTCCTTTTTACCGAAGAAACATAGGTTTTT
CACCCAAGAGTGCAAGCTCGCAGGAATCGCTCTCAATATCCATATAGATTGGTCCCTTTT
TAAAAGGTATTTTTTTGTATCTTCTAAGTATTGTAGCAAAAAAATTGAGTTTTCCTATAT
ACCTAAATAGTTGGTTTTTACTTATTCTAATTCTATCGGCATGCAACTATGGCAATTCAT
GATAGCATATTGTTAAAACACCCACATTTAACGTGTAGTACTCATATTCAATTAAAAAAA
TGGTACTCATATTCAATAAATATTATATAACTAACTTATACTCACTTCTCTTTTATTTAC
TCTGCATATTAGTTTTGTCCTAAGTTAAACTTTCACTCAGTTTCTAGAAAAAAATATAAC
ATCTACAATACCTGACCAATACCGTTAGATTCGTCATAAAATACATTTTCAGATCCATGC
ATATTTGTTACTATAAATGTATATTTTTCGTATAAACACGGTCAAAGGTTATAAAATTTA
ACTTAGGACAAACCTAATATACAAAGTAACTAAAAACAAAGAAAGTGTGTATTTTTGTTT
TAATTATCATATTGTTATTTGAATATTAATGTTTCATATAATTAAGTATAATTGGAAAAA
ATACTGCAACAAATTTTCACAAATATTTTTATTTGAGAAGAACAAATTTTCACAACTTTT
TTTTTGACAAATTTTCACAACTGGGCGCGAAGTTTTCATCTCTAGTTTTGCGAATGAGAA
AGGCGTAAGGCCCATTGAGTAACCTAACCGGCAGGCCGTCGGTACGAAAGCCCATGTGAG
GAAGTGTCCCGAACCTTTCCCAAAATAGAAAGGCTCGTCCTCGTCTTCCCCTCCTGCCCA
GCCACCCCAGTGAGTCCACTCCACCGGATCCCACTAGCTCTGCACGGCGAGGGCGAGAGC
GAGAGCTCGAGAGAGCGACCAAGCTTCTCCGGTGATACACAAGAGGCTCGCCATGTCCTC
GGGCTCCTCCGCGATCGTGGCCGACACGGCGCGCGGGCACTACCACCTGAAGATCGACGG
CTACTCGGTCACCAAGTTCGCCCTCCCCAGGGAGCAGTGCCTCAGGTCTCAGCCATTCTC
CGTGGGAGGCCGCCTCTGGGTCATCGAGTACTACCCCAACGGCGACCAGCTCGTGGGCGT
GAGGTACATTTCCCTCCACCTCGTCCTCGACGACGTCGTCGCCGGAGAAGTGCGTGCGCA
AGTCCAGTTCGGCTTCAAGGCGGACGAGGAGGAGGAGATGCGCGCGCACTCCTTTCTCAA
GAGGCGGGGACGGAAGCCCGCGCCGCTGAAGCTCGGCAAGGTGGAGGCCCGCGGCGCTGG
TGTCTGGGAATGCCCCAAGTTCGTCAAGAAGAAGACCCTGGAGAATTCGAAGCACCTCAA
GGACGATTCCTTCACCATCAAGTGCGACATCGTCGTCCTCAACGAGTTCCGCACCGAGGA
CGGGCCCGCTGCGCCAAGATCCATCGCTGCGCCCCCGTCCGACCTGGGCCGGCAGCTCGG
CGACCTCCTCGCGGCCAAGAAGGGCGCCGACGTGGTCTTCGAGGTCGGCGGCGAGACGTT
CGCGGCTCACCGGTGTCTGCTCGCGGCCCGGTCGCCGGTCTTGAGCGCGGAGCTCTTCGG
CCCGATGACGATGAGGGAGAGCGGCGCCGCCGACCTGATCCGTGTGGCCGACGTGGAGGC
GCGGGTCTTCAGGGCGCTGCTCCGCTTCGTGTACACGGACTCATGGCCGCCGGAGACAGC
GGAAGAAGAGGAATTCGCCATGGCCCAGCATCTGCTCATGGCAGCGGACAAATACCGCAT
GGAGAGGCTCAAGCTGATCTGCCAGGAGAAGCTGTGCAAGAACATCGCGGCCGGCACGGC
GGCGAGCATACTGGCATTGGCCGAGCTGCACCACTGCCATGAGCTCAAAGGCGCATGCTT
CCATTTCCTCAGCTCTCCGAGGAACCTGACGGCAGCCATGGCCGCCGACGACTTCGAGAA
TCTGCGCACAAGCTTCCCCTTTCTTGTCAAGGAGGTGATTGCCAAGTGCTCGGTCGACGC
CTAAGATCAGTGATGGTTGATTGATCGATCCCCTCATGTTCACTAATTATGCTTTGCTTG
CTACCGGCAGTGCACGGATGGTTAATTAATTAGTACTACTAGTGCCTAGGTAGCGCTGGG
AACCATTACACTACAACGTCTTTACTACTGTAATATGGTATGCATGCTAGTTCTCTTAGT
CTTACTAGCAAAAGGGCTCATGCGTTGCAACGGAAGAAAGAAATACCACACGGCACACGC
TCTTAATTTATAAAA
