| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_1574171
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_16677 |
2 |
2438 bp |
MLOC_16677.1 |
Available |
Available |
LOC_Os03g13380.1, FRAME:+1, EVALUE:0.0, 13103.m01550 protein transmembrane 9 superfamily member, putative, expressed |
| MLOC_16678 |
1 |
1099 bp |
MLOC_16678.1 |
Available |
Available |
LOC_Os03g13390.2, FRAME:+3, EVALUE:5e-35, 13103.m01551 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed |
CDS Structure of MLOC_16677
CDS Structure of MLOC_16678
Contig Sequence (6092 bp)
>contig_1574171 6092 assembly3_WGSMorex_rbca.fasta
GTCAACGCCGCCCCGCCGCCCCACCGCCCGAGGAGAGGAGAGGAGAGGACGAGCCATGGC
ATCGCCGGCCGCGCGCGCGGCCTCGGCGCTCCTCCTCCTGCTCGCCCTCGCCGTGGCCGG
CGTCCTCTCCGACGGCTCCGACCACCGCTACAAGCTCGGCGACCCCGTCCCGCTCTACGC
CAACAAGGTCGGCCCCTTCCACAACCCCAGGTCAGCCAGATCTCCATCCCTCCTCCAGAT
CCCTTTCCGTTCCATTCGCGCGCGTGGGTGGGTGGGTGAGTGAGTCATCGGATCCGTCGG
CTCCCGCGGGCGAGTTGGCCGTGCCGTGTACCGTCCCTGTCCGACGCCGGGGCGGAATGG
TCTGGGAGGGTTTACGCCGCGCCACGATGGTTAGCACTTAGCACCGCCTAGTTTCGGAGG
AGATCTGGCGGAGAGCTCTCGGGGCGGTGGATTGCGCGGCATCCGCAACTGATTCAGTGC
ACCCCGGATCTTCCTCACGTAGTAGGCCTCTATTTATGCCCATCTTCAGTTAAGTGTCGG
TTGTTATTGGTTTGGGCGCCAATTTTGGCCTGTATCCAACGAACTTTTGTCTGCAGCGTT
AGGAACCGGATCTTGTTTGCTAAAGCAGATTTCTGCCCCTTTATAAACGCAATCCTCACG
CCTTGCTTCCTTTCCTTGCAGCGAGACGTACCGCTACTTCGACCTCCCTTTCTGCTCCCC
GGGTTAGTTCCTCACTATTCATTCCATCACTTGCTTGGTTAAGTAACTTCTCTCTCCAAC
CATGTCATGCTTATTATCTGTGACTTTAATTTTCAGAGAAAGTGAAGGAGAAGAGCGAGG
CCCTAGGCGAGGTCCTCAATGGGGATCGGCTGGTCGACGCGCCCTACAAGCTTGATTTCC
GCACGGATCATGACTCCAAGGCGGTTTGCCCCAAGAAGCTTACCAAGGAGGACGTGGCCA
AGTTCCGGAACGCCGTAGCCAAGGACTACTACTTCCAGATGTACTATGATGATCTCCCAC
TGTGGGGTTTTATTGGTAAGGTCGAGAAGGGAGGCAAGCCGGACCCGAGCGAGTGGAAGT
ATTACCTCTACAGGCACATTATCTTTGACATCCTCTACAATAACGACCGTGTTATTGAGA
TCAATGTGCACACTGACCAGAGTGCCCTGGTTGACCTGACGGAGGACAAGGAGGTTAATG
TGGACTTCCTTTACACTGTCAAGTGGAAGGAGACACCTACCCCGTTCGAGAAGAGGATGG
AGAAGTATTCCAGCTCCTCCAACATGCCGCATCACTTGGAGGTTCATTGGTTCTCCATTA
TAAATTCTTGTGTTACGGTCCTCCTCCTCACAGGGTTCCTGGCAACAATCCTCATGCGAG
TTCTGAAGAATGATTTTGTGAAGTAAGTTTCCACCAAACTTCATTTATGTGAATTAACTA
ATTCAAGAAAGCTAAAAGTTATGGTATCTATTTCTAGATATGCTAAAACAATGTAAATTG
TTTGTCTGCCCCTACTGCTCAAGTTATAGGCTTTATTTTGTTCTCAGTTCTTACTGCAAA
ACCCTCGTGATACATTTCCATGGAACATATCTGAAATGTTGTTTAGGGCCTGTTTGATCC
GTTTGATCCGATAAAACATCCTAGATAAGGCTTGGGATTGCAATGTCATGCCCACTTGAA
TCCTACGCGATTAAGTTTACACCAAAGGTTGTTTGATTGCACCATGGTAAAAACAAAGGA
ATCTTTCCGATAGGTTTCATGTGCTACAAATCAAACAAAAGGAAAATTTCCTAAGAATCT
TCTGAATTAAAGAGTCGCCCAGTCTTTTGGCAATCTATCATGGATGTATATTAAGAATCC
CCTAATTAAAGATGGATGGCAGCCTAATTGCTTCCATCCAGCTCCACCATTGATTCTTCC
AGTCCTTACTTATTTCAGCCAGTGTTATAGAGCTGCCAAAAATTACTGTCCCTAGATTCT
ATAATTAGGAAAAATATCTTGTAGTCCCCTTTTAAGTTTTTTTGAGCTGCTTTTTTTGCT
CAATTTGGTAATGCTGGATTGTTTTACATGTCAGCTGGGCAAGCTTCTCAAATGATGTGC
AAATCTAGTATCTTCGCAGCATTCACATACAATTTTTGCTCAGAATGCAAGTAGGCAATC
TGTTGACTTGTTATTAGTTTTTACCTTCAGCCTATGCTTTATCCTTTATATTGAATAATG
TTCTGCAGTTGAGGATGTAGGCTGCTGCATGATGTAGAAAGTGTATGAAACAGATACTTC
ATGGGCATATTCATATTTTGCCCATTATATGATGTAATTTAGTGATTTCCTCAGTTATTG
TCTTCTCTATTGATATATTAAGATCATCGACTCCATTCTTTTCTATGTTTCTGAACATCA
TATATATTATTTGAAGGTACGCACATGATGAGGAAGCAGCTGATGACCAAGAAGAGTCTG
GATGGAAGTATATTCACGGTGATGTCTTCAGGTTCCCCAAGAACAAGTCATTGTTTTCGG
CTGCTCTTGGCACTGGAACTCAACTGTTTGCTCTGTAAGTGCTGATGTATTCATTTTTGC
CTTTTATACTGTTACCATACAGTGTCTAAATAAAAATCATGTAGTTATCCCTTGGATTGC
ACATATCTAATGGTCTTATTTGGACATGTCAGAACAACCTTCATATTCCTGCTTGCACTT
GTTGGAGTATTCTACCCTTACAATCGTGGTGCCCTTTTCACTGCATTGGTCGTCATCTAT
GCACTCACCTCAGGAATTGCTGGTTACATTGCAACCTCTTTCTATTGCCAGCTAGAGGGA
ACAAACTGGGTATGTGTTGCCTTTATTTATAAGATATCCCTAGATTATTCTGTTATGTTG
AGATTTTTGAAAGCATGCATTATATTTGTTATAGTTCTAACACTACAATTTTATGCTTGT
ATTCTCAGGTGAGGAACTTGCTGTTAACAGGATGCCTGTTTTGTGGACCTCTCTTCCTGA
CATTCTGTTTCTTGAACACTGTTGCTATTGCTTATAGTGCAACAGCAGCATTGCCATTCG
GCACAATCTGTGTCATTGTGCTGATCTGGACCTTAGTCACATTCCCTCTACTAGTTTTGG
GAGGCATTGCTGGTAAAAACAGCAAGAGTGAATTCCAAGCTCCTTGCCGTACCACCAAAT
ACCCTAGGGAGATTCCTCCACTTCCTTGGTACCGGACAACAGTTCCGCAGATGGCTATGG
CTGGATTTTTGCCTTTCAGTGCTATATATATCGAGCTCTACTACATCTTTGCTAGTGTTT
GGGGCCACCGAATTTACACAATTTACAGCATTCTCTTCATAGTCTTCATCATCCTCCTTA
TCGTCACTGCCTTCATCACTGTTGCGCTGACATACTTCCAGCTTGCTGCTGAAGACCATG
AGTGGTGGTGGAGGTACAGTCATTTTTCTTATCACTATAGTTTGGTACTGGAATTGCAGC
ATAGCAATATTATGAGAGTAAAGTTTGTTACGAATCTTGAGTTCCTGAAACCAGTTACAA
CTCTTGAGCTGGAGTCATGTTTCTTCAATCACGTCATGTTTCTCTTATGTGTAAATATCA
TGAATACATTGTCGCGGATACTGCATTTGTCTATATGATACAGACTTACCGTATACCATA
TTAGCATCCATATTTTCTAAGTTGATGCAAATACATATTTCAATGCTTTAGAAATCATTG
TTCAGATAAACTCCTTGCAGTGATCGTACCTTATTGATTTTGGATTTGTATCTGTTTTCC
ATCATTAAGCGAGCTCTGCTCTTGTTAATTGTTAAATGACCGACCAGACAGATTATCAGC
ACTTTTCTGAAAGATGCCCGTCCAACCATTAGACATTTTCTGTTGGAAAATTCTTTCATT
GTTGTGCTGAACATTTTTTTTATGTAAAATTTTATAAACAGGTCATTCCTGTGCGGAGGA
TCAACTGGATTTTTCGTCTATGGCTACTGTCTGTACTACTACTATGCACGATCGGATATG
TCTGGCTTCATGCAGACATCTTTCTTCTTTGGGTACATGGCGTGCATCTGCTATGCATTC
TTCCTGATGCTGGGTATGGTGGGCTTCCGTGCCGCCTTGTTCTTTGTTCGGCACATATAC
AAGTCGATCAAGTGTGAGTAAGGTGCTGTTGGAGGATGAAGAGCAGCAAGCAGAGTTGTA
CTCCTTTTTGGTGCCGCTAAGAAGTCCCAGTATAGAAAAGGTTAGCTCTCGCGTGCAACA
GGAAGCAACTAGAAGAGATTGGCATGTTTGAGATTAGGCCATTATTCATAGGAAGAGGTA
ATGAACCTATAAATTTCTTGTCATTGTGCGACTGGTGTGATGAACCAACCGTCTTTCCTT
TGATCCATCCCCATGTATTATGTGACGTCCAGACAGTATTACTTTGTTGAACCATAACAA
CCTATATAAATTTCTGTGCAAGTTCCTATGGCAGAATAACACGTGTAGAGATGATGCCTC
AAGAAGGGCATGTCCAGTCGATCTGTACCGTTGTACTTGTATCCTATGCGTTCTGGTTAT
ATATTGTCAGATTTTGAAACATTTTCTTTACAAAGATGGCAAAGATTCTTCTGTAATTTA
CCAGTGGGCTAATTGTTGTTATCGCTGGTTTGTAAAACCATGGCCAAATGCCTCTGGAGG
TTCTCTTATTTTTTATAATGCAATGTATGTCAAATCTGAGTTAAATGTATACTTCAGAGG
GAAAGAAAACAAAAACACAATGGAGAAATCAATGGCGATATCTTTAGAAAAATGCCATGG
GAATAATGGAGTAGTGTGAGTGCGTGACATATCAACCGCCGCTTTGCTTATTCTGGGCTA
AGCATGGGTGATGCAGGCATGGACCTGGCTGTGACCTCGCGCCGGCTCTAGCAGGGTGGC
ATGATGAGCGCCTTTCCTTTCTAGAGCCGTATCGACGAAGGGGTAGATGGATTGCACACG
GCAACGCCCAAATCGTAAAAAGACGCAGAAAGCACGCTGCGTCGAGACCAACACTCCCAA
AATTTCCGCTTCTTTACAAAGCTGGCAAAAAGCTTTCACCGACACGAGGAGCTCAACCAC
CCGTAGCAGTGAGCCGAGGCACGTCTCATGCCGTCAACGCCTAGGAGGAGCGCATATATG
TGACGACTAACCCCTCCCGCTGCAACCCCGAGTCCACCCTGCCTGCTTCAGAGTCTCAGC
TCCCGACCCAGCCCTTCCCTTCCCACACGCCCTCGACTCAACCCATGGGCGCCGGCGATA
GGACGGTCGCGGGCATGCCGCGCATCGGCATGGGCACGGCGGTGCAGGGGCCCAAGCCGG
ACCCCATCCGCCGCGCCGTCCTCCGGGCCATCGAGATTGGGTACCGCCACTTCGACACGG
CGGCGCACTACGAGACCGAGGCCCCCATCGGCGAGGCCGCCGCCGAGGCCGTGCGCTCCG
GCGCCGTCGCCTCCCGGGACGACCTCTTCATCACCTCCAAGCTCTGGTGCAGCGACGCGC
ACGGCGACAGGGTCGTCCCCGCCCTCAGGCACACGCTCCGGTACGGCGCCCATCCCCTCC
TCCTCCCCTAATTCGCTTGGATTGCGTGATAATTACCGATTAGGACAAGAACTGCTCGTG
ATTTAGGTCGGGGTATATATATACGTTACAGTTTCTTTTTTATGTACTAACAAATATGAC
CGTGCGTTGCAACGGGAGGAACAAACTCTCTCATCTTTTTGATGGAAAACAAACGGTACT
CTCCTCAACTAAAGCTTACAATTTCTTCCCGTAATGAGGCACAATTTTTCATCTTGTTTT
AGCTTACAATTTCTTCCCGTAATGAGGCATAATTTGCCACCTTGTTTTATGGGAAACTCT
TACCTTCCAGCGGCGGATCCAAATAAACTGTCCACCGCTTCCTCGTCCCGCGCATCAATC
GATTTCTGAAACTGGGGCACAGTTTCTGAAACTGGTCAGTTGTTTTAGAGAAACTGGCCA
GCCGTGCTCCGCCCCGACGACCTCGCGTCGCCGGCCTGCTGTGGCTCGCCGTCCGCTGCT
GCAGCCCCGCCGCCCCCTCTGCTGCCGGCCTG
