Contig Data
morexGenes
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Map Locations of contig_1573955 (3982 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1573955

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16614 1 2052 bp MLOC_16614.1 Available Available LOC_Os01g43844.1, FRAME:+2, EVALUE:0.0, 13101.m04536 protein cytochrome P450 72A1, putative, expressed





CDS Structure of MLOC_16614






Contig Sequence (3982 bp)

>contig_1573955 3982 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCTCTTTGCCGCTGCCGCCTATCCTCAAACCCAAGGACGAGGCCCGT
GACCGAGTCCACGCGTAAGCACTCTCCGTCGACACCCACTTGGCTTGGGGGACGAACTCG
TGGAATGGTGTCCTTCACGATTGGGTGAGTGCGCCCGCCGACCAACAATGTGGCTGCAGC
AGACGCACGAGGAGGCGGCGTTGGCGGAATGGCAAATCGCTTTCTCGTGGGCTAAGCCGC
TGCCACCCTTCGTCGACCTCACCGGCGATGATGATTGCAAGGATGACGGCAAGGGCAAGG
GCTAGGGTAGCATGCTCACGTTTTCTTTTTTATTTTATGTTTTATTCATTTTTATTAGGA
CTTTGGCCACGGCTAACCGGTCATTTAATTTTAATTATGTTGATTTCGGCCCCATGTTTT
TAAAATTGTTTTTTCACATAGGAAAATCGGTCTGCCATTCATTGAAGGTAAGGGCCGATC
CAAAACAAAAATATTAACGCGTCAATCCGTTCTCTCAATTCAAACGAACAAAAAACAGAG
AAAATATGTGTTGGTTTGGGTCTGCGCGCGGAAGTTATCCTTGCATTTAGGACTGGAGGG
AGTAGTATATAGAAGTGCAATGGTGAGCAGCCACCAGCCCACCACTCATACACTCACTTG
ATCAACCTAGCAAAGGATAAACATCATTCCCATTCCCCTTGGGCTAGCTGTTCCCCCACA
AACAAACGAAGCTAGCATGGCGACGAGCCTGATAGACTCTTTTCCATGGGAGCAGGAGCG
GCTTGTGTATGTGTACGCGTTGGCTTGCGCGGTTGTGGCGTGGTGCGCCGTGAGGGCGCT
GGAGTGGGCGTGGTGGAGGCCCCGGCGCCTGGAGCGGGAGCTGCGGGCGCAGGGCCTCCG
GGGCAGGGCATACCACTCCGTCGCTGGCGACGCGCCGCTTCTGGAGCGTCTCCACAAGGA
GGCCAGGTCCCGGACCATGCCGCTGGGCAGCCACGACGTCGTGCCTCGGGCCATGCCGAT
GTTTCACCAGACCATGAAGGAGCACGGTGCATACTACTACTCTTCTTTGCTTTCTTTTGT
GGTAGTAATGTTTCTTTTTATACCCATGGAAGGATCTAGTTTTCGTTATGTTTCACCAGA
CTATATATAACAGAAAACGAAAATTGGAAACGTGTATCCATGTAAACTGCTAGTAACAAG
CTTCGATGTGTTTGTCAAAAACAAAAACAAAACAGGTAAAATGTCCATCACTTGGTTTGG
ACCGGTGCCAAGAGTGACCATCACCGAGCCTGAACTGGTGCGTGAAGTCCTGTCCAACAA
GCTGGGTCACCTTGAGAAGCTCAACCTGGGCCGACTTCAAAGGATGCTGCACCACGGCGT
GGGTAGCCACGAGGGCGAAAAATGGGCCAAGCACCGCAAGATCATCACCCCTGCCTTCCA
TCTCGAGAAGCTCAAGGTTGTAATACTTGTGTTCTGTGTCATTGACTGACAACAAGTTCA
GACCGTAACAACAATCTCGGTTCCATTTTCAGCGCATGTTGCCGGCTTTCGCCGCATGTT
GCACGGAGCTGGTGCACAGATGGGAAGTTCTAGCCGCCGGTGATGCGCCATGCGAGGTCG
ATGTCTGGCCTGATTTGAAGAATTTGACTGGGGATGTCATCTCACGGGCTGCATTCGGCA
GCAGTTACCATGAAGGCAGGAGGATATTCCAGCTCCAGGGTGAGCAGATCGAGCTCATCG
TGCAGGCCATGGACAAGATGCATATCCCTGGTTACCTGTGAGTCAAGTTCATTCTCCTTT
GGCGTTTACTATTGCTCGATATTATTAGATTGAATTGCTGTGCTGCGGACTGTGCTAATG
CATTTTTTTGTGTGCAGGTTCTTGCCAACCAGAGGCAACCGAAGGATGAATCAGATTGTT
GCGGAGATCGAGAGGGTCCTAAAAGGCATCATCGCAAAAAAAGAGAAGGCCTTGAAAGCC
GGAGAAGCTACCAGTGGCGACGATCTTCTCGGGCTGCTGCTGGAGTCCAACATGGCAAAC
TGCAGGCCGGGAGACGCCGGCATCACGACCGAAGACCTGATCGGAGAGTGCAAGCTGTTC
TACTTCGCCGGCATGGAGACCACGTCCTTGCTGCTCACGTGGACCATGATCGTGCTCTGC
ATGCACCCGGAGTGGCAGGACCGTGCCAGGGAGGAGGTCCTGCATGTCTTCGCCCACGGC
ACGACGCCAGATTACGACGGCTTAGCTCGCCTAAAAATCGTAACCATGGTGCTGTACGAG
GTGCTGCGGCTGTACACGCCGCTGACGTCGGTCCATCGCAAGACGTGCAAGCCCATGGAC
CTCGGCGGCGTCAGGTACCCGGCGGGCATGCTGTTCATGGTGCCATTTCTGTGCCTCCAC
CACGACAAGAATGTTTGGGGCGAGGACGCCGACGAGTTCAGGCCAGGGAGGTTCGCCGAT
GGGGTCTACAAGGCAGGGGCGTCGGCTGACGCGCCGGCCTTCTTCCCATTCGGCTGGGGC
CAGAGGACTTGCGTCGGCCAGAACTTCGCGATGCTCGAGGCCAAGATGGGGATGGCCATG
ATTCTGCAGCGCTTCTCCTTCGAGCTCTCGCCGTCCTACACACACGCGCCGTTCCCCGTC
GGCCTGCTGCACCCAGAGCACGGTGCGCAACTCAGGCTGACGAGGCTGCCGTGAGTTGCA
TATGGCCAAATCGATTGGTTAGCCTGCATATTGTGTTCGAATTAGATGGCCTCGGGAAAC
TTCAGAAAATCTCAAAGGCTCATGTTGACAAGAGGTGGGGTGCTAAGTTTACTCACAGCC
TTAGTGAAAACTATTATTTTTTAACTTGTCTCGACAATTAAATAAGGAGAGAATAAAGTT
TAGAGTGTTACGAAGAACCCTCATACACGGCGTTACAACTAGTCATGCAAAATAATAGTT
CTTAGTTTCTTGATCCAAAGCTTTTCCTCCTCTAAAATGTTGTGAAGGAGGATGGCGGTG
GTGCACTTTTATAGTGGAACACCCAAGCATTTATTTTGTTTCATATTGTCCAAGAGACGA
GCTTGATAAGATAGGCCATAGCATGTTTGTTAGGGTTTTGGTTGTTGGTTCTTGTCAGCA
TCCCCAACGATGGTGCACCTGAAGGGAGCCAGCGCGGCGTTACTGAAGCTGCTTTCTTTG
AAGATGATGAAGATGTTGCAGGCAGGGTCGAGGCGGGAGAAGAGCTGCAAAAGAGGCCCA
GGTCAATGAGGCCCAAGAACCTTTCCAAGTGGCTTGCAAGGCCAAACTAGGTTCGTTAAG
GGTGTACCGCTATATAATGTTTTGTGCTCTCTCTGTAATAGTTTGGCTAGTATTTGAACG
GCTAAGACCGATGCTCGGAAGGGAGAGAGTATAGAGGTGCAGGAGGCTGGGAGGAATTCC
TCTATCCTTCCCCAAATTCGATCTAGATTTCGATTCACTATGAAATTCGTGAGTCCAGTA
GCTAGCTCATAGTATCATCCTCACATCTCGTATTGGAGAAACCGATCTAGAGCTTCCACG
ACACCGCTATGCGACGGGGCTTGGCGAATGGCGACGACAACGAGCCATGGAGGAGCTTAG
CGTCCAAGGGAGCGTGATGTACGATATCCTTCTTCACGAGTTCAACAACAACCTAAAGGA
CAAGCTTTGCTCCCATGGTGAGTCCCTCCTCCAGCCGATGAGCAAAATGTTGGTGGCCAA
CAACACCACTATCGGCAATCTCATGTCGTCTCCGGCTGATGGTATTTGGGGGGAGTTAGC
CCTCGACCTCGACCAAATTCAAGCGGATCTCAGGAAGCTCAAAGCCCCGTATCCGACCAC
GAAGGTGGACGATAATACTTCATGGCGCCACGCTAGGCTCTGTCGCGCACTACAAGGAAT
ATGCTAATACAAGACGCTATTTTTTCGTCGCTACATCATCACGGTTTTTAATTTACGATG
ATCTCACGACGAAAAACCAAGC