Contig Data
morexGenes
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Map Locations of contig_1573609 (4038 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1573609

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16525 1 332 bp MLOC_16525.1 Available Available None
MLOC_16524 1 677 bp AK373774 Not available Available None





CDS Structure of MLOC_16525






CDS Structure of MLOC_16524






Contig Sequence (4038 bp)

>contig_1573609 4038 assembly3_WGSMorex_rbca.fasta
CCGCCGGCGGCCTTGTGGAAGGCGAGGGAGGGGAAGTAGAAGTAGGTGCCGATCTGGTCC
TTGACCTGCAGGATGTAGGTGAAGTTGGCGCCCGCCGGTATCGGGCACGTCGTGCCGGCC
ACGCCGTCCTCGAACGAGTTCCGCCGCTGCTGCACCCCGCTCCTGCATTCGCCGAGCACC
AAACATCATACGCATCACTCCCGTACACACACACACATAGATGCCGGTGGCCCGGCCGAG
ACAATTTCCGTTCACTAGCACTGCAATGCAGCCATTCGTTTGTTTGTTTTTTCTCACATT
CGCTACTGTTGTTCTCTTAATACACACACAGTCTGGAGGTTACTTGATTTCCAGTGATTG
CTCAACGAGTCAAAAGTACGTGTACGTGTAAATAATAATACTAGCACTGAAATACCACTC
CACTGTTTTGCGTTGAAACTTAGGCACCACCTACGACACGGGCACGACTGTTGGTCGGAC
TCGGATTACTCCATCGGCGATATCTACTCGGACGGGAGGGGCCATAGACGCTTGCACGTT
CGCTGGTCCGTCAACTTGTCACCCGCCACGACTCCGACCTAAAATTATTGTCTTACATTT
ATCTAGGTATGAATGTATTTAATCAGGTTATAAGTATTTAGATAAATCTATTTCTAAGCA
AACTTAGAACAAAAAAATTAAAACGAAAGAAGTACAAGCTAAGCTTAGGCTTGTTGTATT
GGAAAATATCAAAAGTAGTATCATGCATATGATACTACATCCATAATGCATAATATCATA
TTTAATTATTATAGAATAGATCATTTATTATTATGCATGACATATAATAGCACAATATTT
AATACTATGATACAATATCATGATATGATACTCAACTCTTTTTTTATTCATTTAATTTTA
TATTACCTCATCAAAATTACTTAATTGACATGATACTATGTACGCATTTGTGCTAGTACT
AGTAATGGTTTTGCTTGACCACTATCAAAAATCAAAACGATTTTGCGACTCTTCGTGTTA
ATGGGCGGGACGGGGTGGGTCCGACCACTATTCCGCCCCGCGCTATAACGTAGCGTAGCG
GCCATGCAAATTTGTCGGTGCACCTAAAGTCTGTTTCTAAACCAGTGCGATAGGCCCTAG
CGTCACTATCATTGTTCCTGAGTAGTAGAGCAGAATCTAGCGACGCATCCAGAGCGTCGC
TCTCAACCCCGTAATTCGTAGCGGCTGTGCACGTCTGAAGTGACATTTTTGCAAAGAAAG
AAGGAAATAAATAAAGAAAGAAAAAAGATTTAGGGTTTGAACAGGAGGGAGGGCCCGTGA
GGCGTCATAACTTTTGAGCACAAGAGGACACGGACGCGCCGAATCTGCAGTGCAGTCCGC
TACAGATCCACCGGTACGGCGGTGGCCTCGCTCGGCTGGCACCCACCCCACCCCACGCAC
ATGCTCACCGACGGCCGACGCGCGACTTGATCCAAGGGCTCGTGGTAAAAGCGTCGCAGC
TCCACCCCGTCCGTGATCATGCTTAGATCACGAGATGAGATGCGGTGTACCTGTACCTGT
GCCTGACCCTGCGCATTATTCCATCCCGACCCAGCCCAGCAAGAGCAAGAGCAAGAGCAA
GAGCAACGCTTGGATCACGAGGTGGTGCTGCTGGTGCCGCTTTGCTTTTGCCTTGCCTAG
ATCAAACCAGATTTGCAAACTGTGCTGCATTGCATCGATCGCATTGAACCCTTGTCTGAC
GCGCCTCTGCATGTGCCATTGCTGCTGCTGGGAGTTGGAGATGTGTTTTTCCTAGGGGCC
CTGCTCTAGTGGTTTGGAGTCCTCTATTTTCATTCATATCCTTGGCAACAACAAGTTGTT
TTTTCGCGATGCCGCTACCTGCTGTTCCTAGAAACCGTATTCTGGCGGGCCGCACAAAAT
AAGCATGACATGCCCCGTCGATTAAGGAGCACTTCGACAAAAGCGTATTCTACTCCCCAT
TGAACCACACACGCCGCTTTCATTGCCCACTAAAACGAGGCCTACTCACTCCTACTTTTA
AGATTTGCAATTTGCAATTGCACTGTCTCACTCACAAAGCAAAAGAGGCACGTACTTGAT
GATTTGCCGTGAATATGACAAGGCTAGTTTACACGACTGGACCGTAAGCGTAAGGCATGT
TGGTTGGTTGGTTGGTTCCATGCGTGGACAACCAGCAGGACCAGGTCACACGCAGCACAT
TACATACTCTATCTAGATCGCCTAATGATATGACTTGTCACGGAACATATAGCTAAGCGG
CCGATATTGTTTTGTCGGACATTTGGATTAGTCAGTGTAACAGTGTTTAATTAAGCACAT
CTTAAAGTTGCGGTCGGTACACTCACACTCGAGCATAGGCATAGCACTACAACTGGGCAA
GCATATCCACTCCAACTTCAACAGGTACAACATTTATTTACTTGTCTAAAACGGATCATG
GGTATCTAAAACTTGTAGTAAGGCCATTAAAACATTGCCATACTCTTGCGATAAGATACT
CTCTCCGTCCCACAATATTAAATCGTTTTTCAAGCTATAGGACAGAGGGATGGCCGGACA
CGAATTAACTTTGAAGAAGTGGTACTTGTAATAAGAAGAGACGAGATCGAAATGGACGGA
TTCGTGAGTTGTTGGGGTGTACCAGGAGAGGAGGAATGGCTCGTTGAGCTTGTTGAAGAC
ATTGACGACGAGGTTATCGTTGGTGACGGCGTCTATCTGCGGCCCCGGGAACTGGCCATT
GATCAGTATTCCCTGCAAACCAATTTATGCAGTCGTTCAGCACGCGGTGATGCTATGCGA
AACTCAATGTGGTGCCACAGCACAGAGAAGAAAAACAGAGCACGAGACCTGCTGCTTGAC
GCCCAGCGGGTAGATGTCGCCGTAGCTCACGTTCCACGTGAAGAACCGGTACGGGTCCTC
GCCGGCGACGAGGACGGAGAGGAGCGGGAGGCCGATGAGGAAGGAGAGGAGAGCAACGGC
GCTGCCACCCATCGCCATCTTCCTAACCGCGCCCATCTAGGCGCTTTCTTGCAGCAATGG
AAGAATGGAACTGTGGGAAAGGAGATGCGGGGGGCTTGTGAGTGGGACGGCTGCTCTTCT
TCTTTATGTTGCTCCAAATGGTGAGTGATTTTCGTCCAGGAGACGGAAGGGGAGTGCGTC
TTAGGAGCGGAGGTAGTGTTGTGTAGTGGAAGTGGTGATGGTGCTGAATTTTGGCGGTGT
CTCCTCCCGTGGGATGTCAGGACACCCTCTTTTGTAGACGGTTGCTCAGGGGAATGAAAT
TGGTAAATCATATTATTAATTTCACACAATACACGTGCAAGCGTTCATATACACGTACAT
ATACATCTCACTCTCGTTAAATGTGCACCGTCGGAAATCGTGAATTAAATCTAGAAATAA
ATGTGATGATCAGGATTTAAACCGCGGTGGGCTGAAATACCCCAGTCCTTCTAACCATTC
AACCACGGATTGGTTTGCATTGGTAAACCCACATTAAAAGACATAGATCATGTACTAGTA
TGACAATGTGCTAGATTTGGCGGTCTCGGGTATTCACATTTTTGTATTTTAACTAGGATA
AATCCGGACATGGATAGCTTCGGGTCGTGCTTACACTTCGGGACGGGTTCGGGCTTGAAT
TACAAACAATACGACATTTCCGGGCCAGGCTTGGGATTTAAATTTCAGTCTGAAATTAAC
CCGTCCCTGTCCGGCTATATGTGAAATCGGGAGAATCACACAAGGTAGGCTGACATCAAA
CAACCCACCACGGTCTATCAGTGTAAGCTCAAGATACGATCCTATCCATATTTTGGTGTG
AGGGTCTCGACACGGATGGAAGTGCATCTCATCGTATCATACGAATGGATATCGTTACAA
GTACATGCACAGAAGAGATGACTATATGAAATTGGCTTACATTCGCCACAAGCTACATCA
TGAACANNNNNNNNNNNNNNNNNNNNNNNTCATCATGAAGAAGAGCAGGGTTCGAGTACG
GACGAAAACAAACGAGAA