| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_1573529
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_16490 |
2 |
1417 bp |
AK365499 |
Not available |
Available |
None |
CDS Structure of MLOC_16490
Contig Sequence (4061 bp)
>contig_1573529 4061 assembly3_WGSMorex_rbca.fasta
AAGTTATTACGCTCCGTTTCTAAATATAAGTCTTTTAAGCGATTTTAATAGGTGTCTACA
TACGGAGCAAAATGATTGAATATACATTCTAAAGTATGTCTANNNNNNNNNNTATGTAGT
TCACTAGTGAAATCTCTATAAAGACTNNNNNNTAGGAACGGAGGGAGTAGTAAATTAGCC
CGCGACTGCACATCCACTATTACATTGTTGCGCTGAAATCTTAGCAAGTTATTGTATACA
ATCGCCATGATTTACAACCCATCTTATTTTAAGCACTTATTTGATAAGATCTATTGATTT
ACCAAAGAAAATATTTTTTCGTGGGTTAATAAACTTGGGAAAATTGATTCCATTTTATAA
AAAAATCGATGAGAGAAAACAAATAGGAGCAAAAAATCGAAGACAGAAGAAAAGAGGAGG
ACGCATATAAGGAAGGTTCGACTAAAGAGATGTAAAATGGGAACCTTATGTTATTTTTAA
GTAGTGGAAATATAAGACGAGCGCCCGAGTTAGCAACGCTCAAGATAGAATTACTGAATT
AGTATTGTCTAGGTCAAACATAACATGTGAAGTAAAAAAGGAAGTACTTCTTATTAGATC
ATAATTTGTAGTGTAAGCTTATATATACACCAAATATGTTTCCCACGGCTTTCACGCGGG
CCACTATCCTATTTTGAGCCTGTATCTCAACTTCTCTGAAAAGATCATTTTCCAGGGGAT
ACTTCCGGATGGGCAGGAAATAGCAGTGAAGAAACTTCGTGGAAGAGCTGGGCATGGTTT
GCATCAGCTGCACAACGAGGTGCTGGTGTTGGCAGAACTTCAGCACAAGAACCTTGTTCA
ATTACGGGGGTTTTACTCGCATAGGGATGATACACTTCTTGTCTACGAATACATCAAGAA
TGGGAGCCTTGCCAGATATCTATCCGGTAATTTTTCCTCTCAACTGATTTGTTCAGTAAC
CAACTTGCCACACTGATAGACCCAGAAGATTTTCAAACGTCGTGTCACGCCAACATAAAA
TTGGAAGACGACCCTCTGGCAATTTAAGCACGGTTTTTTGTAGTAGAGAACTTGAGTGAG
CGCATGACCCAAGTTAATGTTGGATAACTAGGAAACTTTGTGATTAAAATCAGTAAACAA
ATTATGCCTAAAACAATGATTATTAGCATGCATGGTATAGCATATACTAACTTAATAGAA
TATACATCATCGCACATGCAACAACAATCATAATTAGAGACATGATCAGATTAGAACACA
CGTATTGATCGTTCATACATGAAGTAGTCGTGGCTGTTGTAGGGACGATGTTGTTAACGA
CTATGTTGGTGTAGACCGGTTGAAATAGACGTTGGTGACCATGGTGCAGAACAGCGGCGG
AACTTGGTGGTAGACGATCCGTGGTAAAGGATGTGAGCAGCCGGCGCAAAGCGCCTCCTT
GGAACGTAATTTGTCCTCTCCAGGATCACATGAACGATAGTGTTCAGAGACCTGCTCTCC
CGCTACTGGTGCATGCCGGCTTTCATGATGGAATAGACTACGGTAACCGACGCAAGTAAA
GAAAGGAGGCAAAACACTAACTCGTTTACCCCATCACGATCATGTTCGTCTAGCCAGCAT
GGTCTCGTGTACGGATCATGATCTAAACCGACTAGGTTTCTAGTTTGGTGGTATAAAAAA
CCAACTTGAAAATTTAATGGTTAAGAAAGCAGAAAATAAAACGCAGTTCATCCTATTGCG
TTGCAGGATCACAAGGACAGTAAGTATCCAGAGACCAGCACTCCTGCTCGCCGGAGTTCG
GGGTAGAGTAAACTTTGGTGACGAAGCAAGTAGAGAGAGGAGGTAAAATCCTAACTCGTT
TAGCCTATGAGATCCCACATGGGTCTCAAGTAGTAGGGAGTATTTGTTAAGTCACGCCCA
TGCAAGGCCAAAGACTGGATATCGGCAAGCTATTCACACGCTCGTGCCCAATCCGGCAAG
GCAGGAGCGTGTGTGGTGCTCTCTTTCTCTCCTGATACCATCACTTAGTGTTGTGCGAAG
ATTCCACTATATAAGTTGGTGCCCCACCTCCTTGACTAGCGAGGTGGTACTAAAGGTCAC
ACTGCACTTGCCGTTTACCCCTGGACTTTTGAGGTTTACTTGGAAATCTCAGAAAATGTA
TAGGGCAAACCCATTAATTCAAAGAGTTAAATCTCCCACGAGTGTCCTTTCCTATAATTT
TTTTTTTGCGAATGAGTTTCTTTTTCTCTTCTGTTTGTCTTTCAACACTACATATCATAA
ATTGGAATCTTTTGTTAAACCAGATACTGGAGAGGGACATACACTAATTTGGGAGCAAAA
GTATAACATAATTCTTGGTGTTGCCAAGGGAATATTGTATCTTCACGAGGACTCTATCAT
AAGGATTATCCACCGGGATTTGAAACCTAACAACATTCTTCTTGATGAGGACATGGAACC
CAAAATTGCTGACTTTGGGTTGGCAAGGCTGCTAGGAGAAGGGCACACACATACCAAGAC
ATCCAGAGCTGTTGGAACACTGTAAGCTCACGTTCATATCGATATCAAACGTCCCCGAAT
TGCAGAGTACTCTACATATAACTACTCACCATTGATGTGCTGCAGAGGTTATATGGCCCC
CGAGTACGTCTATAATCGACGTGTGTCGCCCAAGATTGATATTTTCAGCTACGGTCTATT
AATCCTGCAAATCGTTACTACGAGAAGGAAGTGCTGGTCTGATGATGGCAAGACTATGAA
TCTCCTCACTGAAGTGCGTGCTGATTTTGCTTGAGTATCATGTCATCTCATCTGTTTAGT
GCATTTGTATGCAGAAGCCTTCATGCATATATATTAATGTTGTTATCCTAGGGATATCAG
GTTTCCACTAACAGGCTAAAATTACATAACAAACTGACAGGTGTGGAGTCACTGGAAAAA
GGGAACAATCTCGCGAATGATGGACAAAACACTCAACCAACATACTCAAAACCAACAGCT
ACGATGCATATACGTCGGGCTGATGTGTGTCCAAGCCGACCCTAGTGACAGGCCTGAGAT
ATCCACCGTCATTTCCATGTTGACCAGAGATAACATGGATCTTCAGCCACTGGAGGAACC
CGCATTCTTCTTCAGGAGTGAGCCAACGTCTGATTTCATGTCCGGAGATGACATCTCTGT
GAATGGTGTTACAGTTACAGATCTGTGTCCTAGGTAAATCGATTGGAAAGGTGGCATGTG
AGTGATGGGTGACCTCCTTGACTGGGGTATATAGTTTATTGTGCGGCAAACAAATAGTAC
TGTCTGTGTGTTGTCTGTACTTATAATGAGGAAACTGTTGGAAGTAAACCCAACGTTCAA
TCCTATTGCATGTGTAAGATGTTATGGAGGCGTCTCAATGTCCTAGACAAGGAGACCCGC
AGCTTATGTTGATAATTTGGATTGAAGTACAAGTTAGGGAGAGAGAGATATGCGTACATA
AGGAAGAGATTGCATGTGTAAGATGTTATGGAGGCGTCTCAATGTCCTAGACAAGGAGAC
CCCCAGCTTATATTAATAATTTGGATTGAATTACAAGTTAGGGAAAGAGAGATATGCGTA
CATAAGGAAGAGATAGAGGAGATCTCTAACTATTCTAACCATACAATATATTTTCCTAAC
ATATCAAGGCACCGGCGTGGCCCCATACAAGCGTGATATATATCTCTAACACCCTCTCTT
AATCTAAACCTCTGAGATTTAGATTATGTTTAAACTCTTCAAAGGATCTCGTAAGCAAAG
CCTTGGTGAAGCCGTCTGCAACTTGATCTTTGAAAGGAACAAACCAAATCTCGAACTCTT
TATTTGCCAGCCTCTTTCTGACAAAGTGATAATCAATCTCAATATGTTTAGTTCTCGCAT
GAAACACAGGATTAGCAGAAAGCTACAAAGCACCGATACCTCACTAGTAGAAAATGGCCC
ATTTGTCCCGGTTCTAGAGGCCCATTAGCCCTGGTTCTAAAACCGGGACTAAAGCCCAAA
ACCTTTAGTCCCGGTTGTCTTACCAACCGGGACAGACGGGC
