| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
 |
Predicted Genes from contig_157347
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_16465 |
1 |
939 bp |
MLOC_16465.1 |
Available |
Available |
LOC_Os03g55010.1, FRAME:+3, EVALUE:5e-127, 13103.m05973 protein UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed |
| MLOC_16467 |
1 |
675 bp |
MLOC_16467.1 |
Available |
Available |
LOC_Os11g03810.1, FRAME:-3, EVALUE:9e-31, 13111.m00324 protein carboxyl-terminal proteinase, putative |
| MLOC_16466 |
1 |
647 bp |
MLOC_16466.1 |
Available |
Available |
LOC_Os11g03810.1, FRAME:-1, EVALUE:2e-61, 13111.m00324 protein carboxyl-terminal proteinase, putative |
CDS Structure of MLOC_16465
CDS Structure of MLOC_16467
CDS Structure of MLOC_16466
Contig Sequence (6413 bp)
>contig_157347 6413 assembly3_WGSMorex_rbca.fasta
GACGCGGCAAACCAGACGACCAGCGCGCGGCAAACAGGTTTTTTAGGCGCGGCGCGTAGC
GCGGCTGTTGGAGATGCTCTTACACACCTCAGGTTCTAAACGTAGGATTGGCATTTTTTC
TCTGAAGAAACAGCGGACTGAATTATTTCTCTGAACAAACGCAGGCTTCCCGAAACGACG
AGGCGCGTTCGAGATCGCCCCCAACATGCCGCCGATGTACACGTCGCACATGCCGTGGAG
CATCGACGGCGCCGCCGAGGGGCAGGAGGTATCCTTCCGGCTGGTGTCCCGCAACACCCA
GGCGACGAGCCTCGCCGAGATCGTCGTGTGCAACTCGTTCCTCGAAGCCGAGGCCGCGGC
GTTCGAGCTGTTCCCCAGCATAGTGCCCATCGGGCCGCTGTTCGCCGACCAGGAGTTCCG
GAAGACCGTCGGGCAGTTTTTGCCGGAGGACACGGGGTGCCTGAAGTGGCTCGACGCCCA
CCCCGATGGCTCCGTCGTGTACGTGGCGTTCGGCAGCTTCACTGTCTTTGACCCGCGGCA
GTTCCGTGAGCTCGCCGAGGGGCTGGAGCTCACCGGCAGGCCGTTCTTCTGGGTGGTGCG
CCTGGACTTCACGACCGGCGGCCTGAGCAAGGCGTGGTACGACGAGTTCACGAACCGCGT
CGTCGTCAACGGCAGTGGCATGATGGTTAGCTGGTGTCCCCAGCAGCAGGTATCTTACAT
TATCATCAACACAGATCTCACGCAGTCATGCTATGTTTCGTTATCTGTGCGCCTCAGACC
TCAGTGCATATTGTAAGCATCAGATCGCGTGATCGCGATTCGCCAACCAACCTTTTTTAA
TTCGTTTTGAACGTGCAGGTCCTCGCGCACCGCGCGGTGGGGTGCTTCGTGTCGCACTGC
GGTTGGAACTCGACGATGGAGGGGGTCAGAAATGGCGTGCCGATCCTGTGTTGGCCGTAC
TTCGTCGACCAGTTCGCAAACCGGAGCTACATCTGCGACATCTGGAGGACCGGAATGGCC
GTGACGCCCGGTGAAGACGGCGTCGTGACGAAGGAGGAGGTGATCGCTAAATTGGGATTG
GTTATCGGTGACAAGGGAATTGCGGAGAGGGCACGTATGCTCAGGGATGCAGCTCGCAAT
AGCCTCAAAGAGGGCGGCTCCTCGTATGAGAATTTCAAGAGATTTGTCGATCTTCTAAGG
GAATGAGGGCATTTTTTTCATGTGATAGTCTCTATGATCTGTTGATCTATATGATTTTCT
AAGAAAGCGTAAATCATGGAAAGTTAGTGCCTGTTCCGAGACGTTACGCTCCACAGCGTC
GGAAGCGGAGCTACAAATCCGAGATGCTTGCACCAATTCATAAATGAATCGCTCGAGCTC
GCATGCATTTTAGCATCCTTAGGATCGATAAAACCTTCTAATTGTATCACATACAACATT
TCCTTAAGGAAATCATTAAGGAAACAATGTTTTGACATTCATCTGTCAGATTTCATAATT
AAAAAATAAAGCAACTACTAACATAATTCCAACAGAATTTAGCATCCTACGGATGAGAAA
ATCTCATTGTAGTCAACTCTTTAAACTTGTCGAAAACCTCTTTACGTAGCAGCAGCGTCA
TCAGCAACTGCCGCTTGTGGGCGTAGCAGCAGAGTCCTGCCAAGGCCGCCTCGGCCCATG
CCGCGTGTCTGCCTGATCCAGCCGTCGCGACCAGGCATGCCCCTCCCACGTTGTCGGCCG
ACCAATAACAAGTAAGCCAACGAGGGGAGCCCGCTAGAGCCTTCCGAAGCTGCGGAGATC
CAGAGCCTACCGAAGCTGGCTAGCTCTATCCCCAGAGTCGGTGTGCCGCCGCGGTTGTTC
CCATGGAAGATCGAAACTAATTATTATGGAAGAAACATAGTTGTTCCTTGCCACTATACA
TTGCATAGATGACTAGTTTTTTTCTTTCTGCCATCGCAATCACAATTGGGAGCAGCATGA
TTGGATACATATTATTGCCATAACTTGGAAGAATTAGTGATGGGTGGTAATCGTTGCTAA
CAGGCGTTTTGGCGTAATGCTACCGTGGTAAGCTCAGGACATGAAACATTGAGCAACGAC
ATAAGAATTTGAACTGTCAAAAGTGCCCTGACGCCTAAATATACTACCATAATTCTGGGG
TAGTATTGCCATATCTCGGCCGTTAAATATACTACCATAATTTGATGTACAGTTATGTGT
TGAACTGTTGATCGGTAAAAACATGGTTAACATTTGAGAAAGCATAGAGTTTGAAACATC
CCCTTATCTAGCCATCTATTTCTGTATCGTGATTCGTGTAAGAACTTTTGTCTTTTTGTT
AAAACAACATATGAACTTTAAACTTTGCATGACAAGAAAACATTTTTACTATAATGTGAG
AAAAAACTTTCAGATTTTTTCAACCAAAATATATATACAAAATGAGATTTTTTACTCAAA
AAAACTGATTTTGTATATTTATTTTGATGAAAAAATCTGTTTTTTTTCACATTGTACTAA
GAATATTTTGTTGTCGTGTAAAGTTTGAAATTCATATGTTCTTTTGTGTGGAGGAAACAA
AATAAAAATAAAAATTATATATAGTAAGTTAGTTGTGTAGCATAGATCTTACAGCGACAT
TGAAAGATAAGGATTATAGATGTTTGAAAGCCTATGCTTTAAAAATCCACGTTCAAAATT
AAAAACATGGATGGTCAATTAATACTTGAAAATCCCATATGCTCGCATAGTACTCCATAT
ATCTGAATGAAAGGTGCACGTTTATTAAGGAATGTCTGCTTAGGAAAACAAAAATATTCA
AAGAACGGAGCGATAACAAATCGATTTTTTGAATAATTAATTATTGATCACAGTAGTATC
CTCCGGGGCCGCCGTAGGCGACGTCGTTGCCTGGATGATGGAGATCTGGTCCAAGGTCCT
TGACATCGTAGCACTTGTGATTAGTGACGATGTTGTTGACAGGGTCATCCACTTGGTCGC
CGCCGTCGTTGTTGATGCCTAGGTAATAGGCGATAGAGGCGGCGTTGTTGGCCCCTGCCG
AGCCGTACATGCCGCTGCCCATCCGCGTCATGGTGTGCCTGCCCCCCGGCCGCGTGTCCA
GCACACGTCCGCCCATCTGGTTGTGGAAGCTCTCGATGAAGGGCATCGGGAAGAAGCTCG
AGTCGAAGTAGCCGATGGCCACCTCGTTGATGGACAACCACCACACCGCCGGCCCGGTCT
GCCTGTACAGCGCAACCGAGACGAAGTAGAGATCACCACCAACCTTGGATTCGCTGTCCC
TGAATTTTGTCCCAAGTGCAAACTGTTTATTCGTCTGAATGAACCCGCAGTCATGATTCA
AGCAGTGCGAATTCACGCCGCCGTCGTTCTGCATGCATATGTGGTGGGATCCTTCAGTTT
CACAGTCCGCCCGGATAAGAAATGACTATATGCTATAGTTATGATTTTCCCAATCAAACT
GTTTAAGTTTGTATACATAGTACTCCCTCCGTAAACTAATATAAGAGTGTTTAGATCACT
AAAGTAATGATGTAAATGCTCTTATATTACTTTACAGAGAGAGTAGTATGGACTTACAGT
GGCGTAGATGTACAGCCTAGGGTTATCGTCGCCCAGAACCGAAGGATACACCTGCAACGA
TGTGGTGGCTATCAAAATTTGTTTCGCTCCAGATAAAATTCACCACTACTTGGTCATTCG
TGGGGAAAATGGACTCCCGATGAGCACTTACAGCCATTCCAACAGCTATTTGATTCTTGA
TGTCAGGCGGATCCGTGCCTGGGATGGGGACAAACTGCCTCTCGTGAGGACTAGCAATGC
GGAGGTAATTCTTTGAGAATTCATTGGGCTCCACTTGTACTTTCCAGATGGGGATTGCAG
CACTAGCTCCATGATATGGTCCGTTTACAGCATATGCAGCAGCTATCTGCAACCAAAGCA
TCCATTGTCAGTGACTCCAAAACTGCTGCTTAATATCCCAGCATCTTTTTCGAAAGCATC
CACCAAGAGCTTTGTTGGTTTATATATTAATAGAGAACAAGATATCCCAACATGTGTATT
AAGAACATTTCAATTGTTTAGGATAAATTTGACCACTTACTTCCACTTTTCCGTTCCCTT
CATCTTGAACGCTCTCGTCAGTAGGATGAACGTATGAGAAGAAACGTAGACTCCGGTTAG
CAACATCATCATCGATAGCAATAGGCTTCCTCCGAATCGGGATGGTTCCTTCTGGACAGC
TACCACTTCTTCGCCATGTTTGCTCAGGAAGACTGTAGTTTCTTCCTTTAAGCTTATGCA
CTATTTTAGGAGGTTCCTTGGTTGGTTTAAACTGAAAATCATCCAACATATACAGTAGCA
TATCTTAGTGTGTTTTTTCATTTTCTCCGGCAGAACTAATCAAATGTATCATCTACCAGC
CATCTATGATCTAGAAGTGAGCTAATAAAATTAACACTATGCATGTGTTGTTTTAGAAGT
GAGCCATGACTATACTCTTCACTATAGCCTTATGCATAGAAATTAATAAATTATAAAAAA
AGTACTCACATACTTATTTTCTATGAATACAAATCCTATAAACTTGAGGTATGTGTGGAT
ATTGTTACATTAGAAATATTTAAAAGTAAGACAAAAAACCTGGATTTTGTGATCCCGAAG
CAATGGATTCTTGAGGCTAGGTTGCTTGTAGATGTCAACACAGTCGATTATATCACCGCA
TTCGCTCTTTTACAAGAAAGCAAAGTAATATTTAGCACATGAAAATACTAAAAGATCAAT
CAATGGTTTACTGTAAATATTGGCCTTTATGATTATTGAAGGAAGAGAAGGAAGTCATGG
TGGTTAGCAAATTCATCAAGTAACATAAAAATGTACCACTGGATGGATGTAAACTGCAAA
GATCCACGAATTCGTCGTGTAATCCTTGAAAAGAAAACAATGCAATCACCTCAATGGTCT
TGATAATATCATTGGGTTCAACATGTAACCCATGAATACACGTTGGCAACAGTCGAGACA
CTACAAACAATGCCAGAGACAAAGAAAGAAGGCTCATTCTTTGCGAAACAAGAAAACTGG
ATCTTGTATAAATTGGCTAGAAGAAGAAACTTTGAGGGTATATATAACTAGTAAATCCGT
GCAATGCCGTTTGATATTAGACAATATATTAAATGCATGCGGATATTAGATACGGCATTA
TTTGCGTTTCATTTATTTCACTATCTTCTTAATTTATATTTTGTATGACACTACATGCAT
GCTAAACGTGTTGAGCGCTCGACATTGAAGCAACCTAAGACGTTGGATTGACCTAGTTTA
GTGGCCGAGATTTGTTGGATCTAGCCATTTGGGTCTTCTTATATTGATACACATATAGAT
ATAGATTTAGATGTGATTAGAATTATATTTATTTTTGTTATGACATTAACTGCACACTGA
ACGTGTTGAGTGCTCGACAATGGAGCAAGCTAATTAAGTCGTTGGATTGACCTGGATTGA
TGACGGAGATTTGTTGGATCTACCCCTTTGAATCTTTTTATATTGATACAGATACGGATA
TAGATGTTCAGATTCTTTTGAGTAGTCAAAAGAAATTTGTTACCTAAGTATATATGATGT
CTAGATTTTTTTTGAGCAGTCAAAAGCAACTTCACGTTCACTCCAAATCATCATCTCATT
CGTGAAATCTTCACCAACAACAATACATAGGAAAAATAAGGTAAATTGTGCATGTACACC
TCTTACAGGATCCGGTTTAAGATCAAGGGCGAATCAAAGTATAGTGTAAATAATCAATGG
TAGATTTGGAGCAAGAAGTGATTGCTTATGTGATCTTTTTCTTTTAGTACATAAAGATTA
TGAAATGTATCCCCACATATCGAAATATTCAATTATATATATCACAATGCAGGATGAAGT
GTTACCAAATCTCCATGCATTAATATTATCCGCTATACATGTTAAATCAAATATTGATGC
AATGGTTTAAATGAGAACAAGATTGATGTATTAACCAATTTGCACCATCTAAAAATGACA
CTCCTCCCATACACAAATATATGATGTTTTAGACATTTCATTATGAAGTACATACAGACT
AAAACTAAGGCACAAACACATTAAAATATGTCTATATACAGCCGATTCAAAAATAAAGTT
GGAACATCTTATATTTGTGAACGCAGGGAGTACCTACTACTTCATAAAACATTTATCACA
TCGGATACAAATATGAATCACCCCAGGACGTTGCAAGTATGAGGTGAAAACATAAGAGTA
TTAGCCTGACAAAATGTATAAAACTCTACATGAACCATCCGGTTGACAATGCACATACTT
GCGTGAAATATCCATGTGAGCCTAGCATATATGTACCCCCCCCCCCCCCCCCC
