Contig Data
morexGenes
Links



Map Locations of contig_157345 (5035 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_157345

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16458 2 1443 bp AK356922 Available Available None





CDS Structure of MLOC_16458






Contig Sequence (5035 bp)

>contig_157345 5035 assembly3_WGSMorex_rbca.fasta
AAAAATGAGGGGTGGAATTAAAATTTACGAAAGTTTGTGTGGCCGAAACATCTGGTGGGC
TGGGTTTGGCGTTGAAAGGTATCGTAACAACAATTGCAGCGTTGGAAAAGGGGGGGGGGC
CTTTCAACCCCCCCCCCCCTCCCCGCCCCGTCCAGTAGATTCACCACTTGATTCTCAAAA
AACAAGTAGATTCATCACTTTTGCTAAAAAAAACAAAGTAGATTCACCACTGCCTCGACC
TAATGTCATTACTTTTGATCTTGAAATGCCACTAAATTATTTTTATTTTATTTGACACTG
TTGTATGGTTTGTTCATTTGGACGAACTTGTTTTTTAGGCAAGAAAAGGAAAAGTGTCCT
GCAAGTCTCGGGAGCTCACCAAATGTGAATCCTTAATAATCCTGTAAGCCATGTTCAACA
TGTTAAGTCAATGGTACTTCCTCCGTTTCAGTTTATAAATCCGGCACGTGTATCTAGGTC
NNNNNNNNNNNNNNNNTAATGAGAGGCATATATTACAAAAAATNNNNNNNNNNAAACTTT
AGATGTTCTATTTTCTAATAATATAATTTTTATGTTAAACAATATAATTTATATAAGTCA
AATTGACGANNNNNNNNNNNNNGCATGCCTTATAAACTGTGACGGATGGAGTACCTTTTT
GTAACTTGTGCCAGATGGCGGCACTTAATATCCAGGAGGCTTTAACTCGTATCAATGATA
AGTTTTTACATTTGAAATCATGAATCACATGTATGTGTGGTTCCAGTAATCGATGAGAGA
TTCTTTGTTACTGCTTTTTTCCGCATGATAAGGTCATCCAAACATGCATAATGCTAGAAG
GGTTGGACGCGCTTTGCTGTGTTGTTTATATTTTTAGATTTTCATAATTTATACTCCCTT
CGTTTCAAAATTCTTGTCTTAATTTTTTTTAGATATGAATGCATTTAGATACTAAAACGA
CAATAATTTTGAAACGGAGGGAGTATCTATCTTCAAATATGATATGTATTAGTTTTTTAA
AAAGTCAAACCTCTTGAAATTTGTCCAGATTTTTGTAGGAATATATCGGTGTCCATAATA
TAAGATCAGATTATTAGATTCATCATGAAATAAATTTTCATATTTTAGTATTTATTATTG
TGGATGTCGATATTTTTACCTCTGAACTTGATTAAAGTTTTTAAAAATCGACTTTCCAAT
AAACTAATACATCTTAGATTTTAGAACGGAATGGGTATTAAGTTTGGTTAGTGGAAAAGA
TGAGGAGTGTCTTTTCTTTTTTATTCATATAATGCGGTGTTCTGCTAGGCTTTCGCGCTG
TGATTTTATGAACTGCTGATCAACTCATATTATGTGAGAAAAATTTATGCATCGATGGCT
GCATGTACTATATTAATGCTACAATATCACAAGTTAATGCTATTTGTTTTCTAGATGATG
AGTAGTGCCAGGATTGATAAATTATAGGCCGATTGTTTCCAATTGATTTGAAGAATTATT
GACCCAGTCAAAATCATGATTGAAATCCAATATTTATTTTGTCAATGAAATAAGAGATCA
TGGTGAATTAAAATAATTGAGTTAGAGATTATTAACCCAGTTAAAATTGATGATCCAGTT
CCAAATTTATAGCCTCAATTGAACATCTTTAATTCCAGGGAGCTTAGTGATTTAGTATAT
TGGCACCCCTCTTAGTGCTTGTTAAATTAATCATGAATCTATGAAAAAGACTTTTTTTGT
TACTACTTCCTTTTGCCCTCACAGCCTGAGAATTACATACCCCTCCATCCCGTAATATAA
GAACGTTCAGCTTAAAAAACGTTTTTAACAGGGAGCGTATTTCATTGCGATTCTTCTAAT
CTAGCTGTAGCGCTGCCTGATGGTACTAATACAGCCTTTTAGCTCATCGCAGCAAAAGGC
TAGCGATTAGGAAAACGGAAGGAAATCTCCCTCCACTAACCGTGACAGCCAGTAAGTGGC
AGAGTACCTTGTCTCTTTTGACAGTTTATATGCATCGGCATTCCGCTTGTGCTCTGCATG
TTGTACCCTCTGTCCATTCTTAGAGGTGACAGACGGGGTGCCGGCAGGTACAGCAGGGAT
ACGGCAGATACAGAGCTGCAGAGCGATAGCTGCTTATTTGTTGCCGTTGCGAGACTCCAT
CCAGAAGTCCGACCATAAAAAACGAAGCACCGTCAGCACTTCTGATTCACTGATCACCAG
CCAGACGGAACAGATGCGGAAGCCGGCAAGGACGCGCAGCGGAACCCTGCAGAAGTCCAG
CCTTCTCATAACAGTCCACGCTGTCCGAGAGCGTCTCCTCCAGCTTCCGCGGCTTCCACC
CCAGATCCTTCAGCTTCTGCGACGATATCGGCGCCTTACGGTCCACGTCGACGATGCTGT
AAAAAGCAGAGCAGGGTCTTCTTCAGACCATGAACGGGCTGCAGGAGAATTGTGCGGTGT
GACAAGTTTTGAGTTCTGACCGAGCCAAGGTGAGATAACCTACTTGTTCACATAGCTGTA
CTGTGGGTGCATCTTCTTCAGCAAGTCCACCAAGTCCGTTGTGCAGATGTTGTTCGGCGT
GCAGATGTATCTCCCATACGATTCTGCCTTCTCGTACACAAGCAGCAAGGCGTCAGCCAC
ATCGCGGACGTCTACAATGTGCCACAGCTTGTTGCTCATCACGTCAGGGCCTCCTGTGAA
TTGTCACACAATGTTCCAGTTAATGGAGCCTACCAAACAGATTTCTGCCGCGTACAACAG
CAAGAATAAGACCGGGGAACTAGACCTCCGTCCCAGAAAAATACAGGAGAAGTATCATTT
ATTTCAAGGCTGCTCATTTTCCAAAAGATTACTTCAGTAACACACCAAATGTGCCGCTTC
TAAGACTCAAAAATTCTAGCACGCAATTTGGTACTGTGTGCTTTTGTAAATCGCTGTTCA
TGTTCACGCATGCATAATTTCAACAATGAATGAGGCATCAAGTGCTCAAGCACATGCAAC
AGGTTGTAAAGGATCAGCTTATGGATGTGTGTCCTCATCTCACAGCTGTAGAGCATCATA
GAAAGGCATATAGCAGCTATCGTTGAAAAAGAATACAAAACACAAACAGGTGGCAGGAAA
GGAACCTAGTTATCATCTGCAAACAACGTATTGTAGATAATGACCATCCAATTTTTCGGA
CTTATCCGTTAACTGAAATTGAAGAGCGGATCGATATATAATAACAGGAACTATCAATGC
GACCGATCCCATCTATAGCTAACTATCATTATGCGACAGCAGATAGCCGTATGATACACA
TCCAGAAGTCTTTGGTTGGAGAAATGGACACATTCATTCCCCAAATGATAGATTAGCCTT
CGATTAGACCAACTTGCCAAGTCAAGCGTGATATTCATTAATGTGAAATTTCAGGCAATA
ATAGGAAACAAATGGACAGAGATCAGTATTTACCGTTAGTAACGTAGATTAAGAATTTGC
TACTTGTATTCACAGTAGGCTGCAACAATGGACCAAAAACCAAAGGAGGGCAAACCGTAA
CAACATTTAATCCATTCTTCTCCGAATATTCAAAGGATGCCTGTTCGGCCACAATCTTAG
CAACAGAATACCAGTCCTGCAAGCAAAAATCAGTAAAGGTCAAAATTTAGTCTTTGTGGA
AGTTATCTCTAAGGAAACTTTCTTTTGTTATGGATACAAGCCTTTCAAAAGAGCGAACAC
TACAAGGAACCAGAAAATTTGTACTCATGTGTCTGCCATGAATTGTGATGCGTGCATAGT
GCTTTGGAAATTTCCTTTACTAAATAGCATCTCTAACCTCGTTCTTCTGGCAGAAGTCTT
TGTCTGACCAGCAACTCTCATCTTTAAGTTTATCTTGAGGCCAATTCGGGTTGAAATCAA
CTGCAGCAGTGGATGACAAGACAATAACCTTCTGAACCTTCATAGCCGAGCAAGCCTTTA
GCACATTTGAAGTACCTTTCACAGCAGGAGCCAATACTTCTGACTGCACATATGCATTTA
AACTGCGGTGAGAGGAGTACTAGCAATTCTACAGTGTTCAACACTCACAATGCCAACAAG
AAATGCATCCCGACAGCTCGCAATTCTAACACTTTTGATAATCTAAACAATGTTAGCACA
CAAAGGTCAAAGCACATACCAATCTACTATTTGCATTGCACTAATTACTCCCAACGCTAT
AATATGATGTGCAAGTGTTCTCCAGGAGCTAGTATTGCAAACATATATTACGGCGAGCCT
AGCTTTGCAAGCACCAAAAAATGCCAAACTATATGGGATTGAAAATGCATCACCCTATCA
AGAATGACACGCGTGCCAATAGGTATAATTCACAACGCTGCTTCACTGTCAATACAAGTT
CATTACTGTACCAAACAATGTAGCTACAGTAACACACGGAATGATTTTATGACGCCGAAG
CATTAGTTGCCACTTGGAAAGAACACCTGCCTCAGGATCAACAATCTTATCTTCAGGCAC
CGGAGTGGCGAGGTGGAAGACCCCCTCACACCCCTCAAACGCACGTGTCAGCGTGTCGTA
GTCGAGCACGTCGGCCCTGAACAAGTGCAGATTCTCCCGGGCCTCGTCCATCTGCTTGAG
GTGGACATTCTTGGGGTCACCTGAAAGAGCATTTCAGACTTTAATCAGAACGCTGTACTT
AACCGTGGACTAAGCACTTTGTTTTATCCGTTCGCTTTCGCCCATGATCAATTAAGCCCT
GCTTTCTTCAATCGGACACGGAACCCCGACTGATTGACGGCCACTACGATTCTATGAATG
AATGCGAAGCACATACCGACACAGGACTGGGATTCATTTTCAACCATGAATGAATGCAAA
GCTCATCTGGACACGGAACTCCGATCGATTTGCAACTATGGATGAATGCAAATCCAAATC
ACACATATGACACGGTACTGAATCAACTGTAACTGCAAAGGGGGAAGGGGGGGGGGGGGG
GGGGGGGGGGCGGGGGGGGGGGGGAAAGGGCGGGGGGTCAAAATCTACCTAACAA