| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1573332
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_16420 |
1 |
1594 bp |
MLOC_16420.1 |
Available |
Available |
LOC_Os02g55420.1, FRAME:-2, EVALUE:0.0, 13102.m06354 protein aminotransferase, classes I and II, domain containing protein, expressed |
CDS Structure of MLOC_16420
Contig Sequence (5472 bp)
>contig_1573332 5472 assembly3_WGSMorex_rbca.fasta
TTGCGGCGCCGCCCTCGTTCATCACCAGTCCGCCTTCGGCTTCCCGAAGCTTCCTCTCCA
GGATTCGGTGAAGAAGTAGCACAAGAGATTCTTCTATGTGAAGAATGTGAATCCCCTGCT
CGACTACATCAACCTGTCTCCTTTCGCCACCGCCCGCCCGGCTGCGAAGCTGAACTGGAA
GAGTATGCTTTCGAAGCCCATCCCAGAGGTGAAGCAGATATGCGCCCACCTAAATCAAGT
TTTCTATAAGTCTAGATCATAAATTAGGCCACTGGCCTAATGAATACTAAAGTTTACTTT
GAACTACTTGCATTACTAAAACACTCACTATTGATTGATTTTCCCTATATGTAGTGCTAC
AATGAATCCGGGCAAGAATTTTTCCAAAAACTGTAACAACCTCCTGAAGCAATAATCACT
GCCATAAACCAAAGATTCAACACAAAGGTTCAGCCAATCAACTGTCATAAACCAAAGATT
CAACACAAAAATTCAGCCAATCATTCACACGATGAGCGAGGAAAAAGCGGTTCTCTCTTG
GGAGCGGTGTCGGAGAGACCGGGCTTGGAGCCCGGTTTACCAAAAAAAAAACTTAAAAGT
TTTAAAAAATATTAATTTTTCTATACAAATACATATACATAGTAATCAAGTACATAAAAA
GTTTTATTAGGTAATTCGGTTATTTGCATGCTACACAAAAAAATAAATATCTGACTCAGA
TACAACAAAAATAAAGCCCATTTTAATCTCCGTATTTATCTTTTTTGTATACGTTACATG
AGAGCATAAATGCTCATGAAAATTTATACGCGTGTACTACAAATACACATATATGTATAC
AGTTTTTTCTAGGTTTTTTCAATGTGTGAAAATAGTATTTTGGCTAAAAAAATACTGCTG
TGCTTTTTCGTTCTCTCTTTCCCTGATCACTGGGAAGCCGTACAAGCATCCAGATGTGCA
GATAAAGGAGATGTTCTTATCTTCTACAGTCAGATCTAATAATGGTAGGCAGCGATCTAA
GAATTACAGTATGTATGAACAGGGGTTCTCTATATAAATGGTTGCAACTAGCTCGACCTA
AAATCCATTGTCATTCTTTCTCTCATGTTAAAATAAAAAACAACATGCCTGCAAGCGCGG
ATTGAGCCAATTAGAATTATTACAAGCTTGTAAGGACCGTACAAGTAACTAGCATCCGTG
AGTTTTGCCAGATTATTTATTACTGTACCTCTGAATTAACGGACACATCATCAGCATCCT
GACTTACAACTCGAGCTGGAAGGACCCAAAAATCCCAGCAAACTATAGAAGGAACTACTC
GCAATAGCGTGGCTGCGACGCAAATCGTAATCTAGTTGACATTGTGGAAGGAGTCGATGA
TGGCATCAGCAAGGTACTCGCATTTCGCCAGGTTCAGCCCTGCCAACGAAATCCTCCCGT
CCTTGGTCATATATATGTGCCATTTATCGGTCATGTTATCGCTCTGCAAAATACAAGATG
GAAACTTAGATCAGGATGTGTTCTGATAACATGTCATTCAGAGATAACATGCGAAAACAG
TATCTGTGGAATTCAAAGGCAAAGTCACCTGGGTTCTGTTCAAGCCCGTGAAGGAGAACA
TGCCTATCTGGCTAAGAATGAAAGACCAGTCCTTGCCAGACTGGTCCTTTGCAGTCAAGC
TATCGTAAAGCTTCTGCCGAACATTCTTGATCCGCCCTGCCATTTGTTCCATCTCTTCTT
TCCACTCACCGAACATGGTAGGGTCTCCAACAACGTTGGCGACGATCTTGGCACCGTGAA
TAGGTGGGTTTGAGTACATGGGCCGCGCCAATCGCTTCAACTGGCTCTTCACCCTGCAAA
AGCTTCCAGTGTCATAATACATAGACAATTCATACAGATTCTTACTTTGAAGACACTGCT
GCAGCAATTTGTTTATTACTGTGCAGGATGAAGGTGCAGAAATAAAATAATCACATTTCA
TCCAACTGAATGTAAGGGGGAAATTTAGGCAGGTAGGCAGGCAGTCAACCATTTAAAACA
CAAGATTACCTATCTGCAACTTCCGGTGCTGTGCAAATGACATTTATCGCACCGATCCTT
TCTGCATATAGACCAAGGTTCTTGCTGTAAGACTGTGCAACAAACACTTCCAGGCCACGC
TTAACAAAAAGCCTGACGGAGGATGCATCTTCATCAAGGCTTCCACTGGCAAAACCCTAC
AAAGAAAATATAACAGACAGTAAGAGGCAAATTGTAAAAAAATAAATAGAAACACCTGCA
TGAAAACCACTCACTTGATAGGCAACATCAAAGAAAGGCATATGTTTTTTCTCTTCAATC
AGATCTGCCAGTTTCTCCCACTGTTGAGGAGTTGGGTCTATTCCAGTTGGATTGTGAGCA
CAACCATGTAGCAGAACAAAAGACCCTTCTGGGGCAGCCTAGTTTGCAAAGAGTAAATAC
ATTAGGTCAAACAATAACTGGTTCGTAAGTTAACAGTACTAAAAGGGAAAACTCACTTCA
TTCCCAGATTGCAAGTTTCATATGATGGGTGCAACCATTTCAGTTCAAAAAAATGAGTGC
AGCCAGTGAGGGAGCACATGAAGGGGCTAGTTCAGCACAGAGTGGGCCATTTCTTGCTAG
TGGGCCAAATTAATACTACTACCAAATCCTAAGAGAATGCTTGGAGAGAAGGATGGGACA
GGACATGGCCCAACCCTGATGCTCCGCCACTGAGTGCAAGCCGCTAGAAAGAAAAAACTA
CTCTTAACGAAGTTCATCCAATTAATAAAGATAGCAATATAAAGAGCAATATTTGAATAA
TGGTTAATTTTCTTGGTACAGATATTTTAGGTACCTGTATGTCAGCTATCATTCCTTCAA
AATCCAGCCCAACAGTCTTGGGATCATAATACCGGTATTCTGACCATGGCACCCTAGCAT
CATTGAATATGTTTTTGTGGTTTCCTGTTAACATATAAATTGGACGAATTTATGAGATTC
GCCACAGAAAACAATGAAAAACAGACTTATGCACATGAAGTCATGAGCACTAGTTGCAGT
TCCCGATTCGCCATACATACCCCATGTGGGAGATGATATAAGTACTTTTGCATCAGGGAA
GTATCTCTGAATAAATGCTGCAGCAAGGCGTAATGATCCAGTCCCTGAGAGAGACTGAAG
AGTAGCAACCTACAGTAGGAGTGGTTACTAGATAAGGTTAGCCAAACATAAGAGGAAACT
CCTTAGGTGACAGCTTGTCAGGCAGTCATAATATAACAAGAGCGATGGCAAAGGCCACAT
AATCCATACCCGTCCTTGCTTGATGACAGGATTGTCAGCTCCAAGCAATAGATCTGCAGT
TGCTTTGTTAAATGCAGCAAAGCCTTCAATAGGCAGATACTGCACCATAAAGAAAACATC
CAGACTTTCATTCTCAGCAAAAGAAGAGAAGGAAAATATGATTCTTTATGACCAAGTCCA
AATCATCCGAATTGCAAAATTCCATCATACCTCTTTGTTTTCTCCTTTCTCTAGCATAAG
TTTTTCAGCCTGCCACATGTAACAATAGCACATCAAAATAGGAACCAGGATTATTCAGGA
AATGCCAAGGACGATTAGGCTTACCTTCTTGACAACGTTGAGGACTGCGGGCTGTAGCTC
TTCCGTTCTGTAGGCGCCAACACCAAGGTTGAGCTTCAGATCACTTGTATCTGCTTTAAA
CGCTTCCGAGACCCCAAGGATCGGGTCTGGAGGGGCCATCGACACTCCTTCAAAGCGAGA
AGCGTGTACTGTAAGTGCCATCGCTATGTGGCCAGTATTCTGCATCCAAAACGGCAAAGT
AAGAATTACATTTCAAAGCACAAACCATATCACAAGATGTCAAATATTGGCATGGCACCA
CAACCAGGCTTCACCGCTTCAGGACACAGCTGATGTCACATACAAAAGGATTATCCATGG
AGAAACAGAAATGCTGGCTTAACCAGCTACACTACCAACTGCAATGTGCCTCAACTATGA
AAAGAGCAACTCTAGCATGGTCCTATCAGTACCGTAAATATGTATAACTACTTCTATCAG
AAGCTTGGACTAAGCACACCATGTTAGAGCAAGTACAATAACACCTAGTCAGCCGGCTGT
AGCATGTTCCATGTCAGCGAAGTCGTACGTGGAGAAGTGATACGTGAAGAGAGAGACTTG
AGCCAGCACTAGATGTACATCCCGGCTATATCACGGTAAACGAGAGCATAAAGCCTGCAT
GCAACCCGTGAGTGAGCTTGTAGGCGGCGTTTTACTCCCTACACCAATCCCGTGCGTTTT
TCTGCATCCCCAATAGTAAATCATTTAATGCTATAGCCAAGATAATAACCATTCTATAGC
CAGTCTATTATTAAGCCAACTATTTACAAAAGGCTTTAGATGACATGGCACAGCTATATA
GCCAACAGAAGGCTCTTCTATTAACCATGCTCTTATAGCTGTGCAGAACTAAACGAGCAA
CTCTAGACTGCTTGTTCTCAAAAGAAGTCAGCATACTTTATGATTTATGATGAACAGAAG
TTATTCATAAAGGACACTTGATCCTTCAAATCCTTAAGAGTGTTCCTTATTATTATTATT
ATTTCTACTTAGTACTCGGTCCTGAGTAGCAGAGCTGAAAGGTCACTGAAAAGTTGAATT
AGGAAAGGTGCGTATCAGAGTCATGCTAAGTCTGAACCCCAGGAGACACCAGCAGCCTAG
ATAAGATTCAGTCATGAAAAGTTGAATTTGGAAAAATCAAAGTCCTGAATCGAGAACACC
GCAAGCAAACCACCAGCAGTCCTGAATTGCCAGTCCAGGAAGCAAGTTACGAGGCCACAC
AAGAAATATAACAGAAAACGTGCATACATCAGAGCTTCGTGGAGGCTGAATCCCAGGAGG
GACACCAACAGTCCAAAGCATGTTACTCCATGAACAGCTGCTGTTCTAAAGGCTTGTACT
GGCATAGGAGTACTCGCTTAGTTGAATTTTTTATTTTAGAAAGAACAGGGAGCTCGCTTA
GTCGATTCTGAACATTACTGTACGCGATAACACTAAACCACTAGCAGCCCTGGATCGGCA
GTCCAGGAAGCGGGCTCCTATTTGAGTCGTGCACACCTGAACACCTATGACAGGGCCCGG
AAGCATCTGGCACAGCCGCGTTACAGAACCGGCTCCATTCACAGATCAAATGCGGGATCT
AAGTAAGCCGGAGCGAGCGGGGACACAGGGTCGGATCATTCACCTTCCTCGCGATCCCTA
CGCGGCACCCGGCCCTCCCGTCGTTCCTTCCTCCGCCGAACACCTGCGCCCACGACAAAA
CAGACAGAAAACAGCCTCAGAATCCACTGCCAGAAACAGACGCCGACGGGCAGGTGTGGA
GAAGCGGGCCCGTGCCTTGCGCCGGCCGGGGGGGGCGGGGGGGGGCGCGGCGGCCGCCCC
CCCCGGCCCCCC
