| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_1573279
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_16402 |
1 |
828 bp |
MLOC_16402.1 |
Available |
Available |
LOC_Os05g35380.1, FRAME:+2, EVALUE:2e-90, 13105.m03704 protein universal stress protein domain containing protein, putative, expressed |
CDS Structure of MLOC_16402
Contig Sequence (4025 bp)
>contig_1573279 4025 assembly3_WGSMorex_rbca.fasta
CACCGGCAGGCGGGGGTCGAGGAGGTGGTCGAGGAAGAAGGCGCGGGCGAGAGGCCACCG
GCGCGGCGGCGGGTTCTGCGGGGCGCCGGAGGATGCCGCGGCGGCGGGGAGGAAGCGGGT
GATGGTGGTGGTGGACCAGAGCTCCGGGGCCAAGCACGCCATGATGTGGGCGCTCACCCA
CGTCGCCAACCGTGGCGACTTCCTCACGCTGCTCCACGTCCTGCCGCGCGGCAGCGCCGC
CCGCGGGGACGACGCCTCCGGGCTCGCCAACTCCCTCGGCTCCCTCTGCAAGGCCTGCAA
GCCCGAGGTGCGTGCCTCTGCTCCCTCCCCTTCCGCAAGCCGCCTTCTTTTCTTTGATCT
GCACCGCTCCGCGCTCGTCTTGGGCAAGCATTAGTGCTACGCAGAATGCAGTAACTTAAG
CTGCTTTCCATTTCATTACGCTCGACATTGACATTCCACTGTCTGTCTTTGGGGCATGAG
AGCAAGGTGGCACCGACGGGCAGGTGTGATTTGTAGTGCCACTAGTTTGTTTTAGAGCCT
TCAAGCCAAAGCCATATGTACTGTGCAGTGCAGGTGTTTCTTTTACAATCTGCAGTATGG
CCTCAAGCTTCCATAAAAAATGACCTTAATTAAGCACTGGATGTAGTACAAAGAAATGCG
GCTTGATGAAAAATTATTTCAGGATAAGTCTTTTTGATAGAGTGAAGGAAGGGGAAAGAC
GCTACTAGTTATGGTAACTCTGTATTTTTTGGGCCTCTTCAAGCATAAAAGGACACTGCA
CTGACATTTTCTCTACAGAGAAACCTGTGCTAGGCTAGTTGGATCTGTGGCTCTTCTCAG
ATCAAGTGTTTTTGGGTGTATTGGCCCCACTTGGAGGCAAGAGTTACGCTAGGTGTAGAG
ATGTAGGTAGATCAGATCAGAACATTGATGAAAAGGAAAAGCAAGGGAATCATCATAGCC
ATCTTTTTATTCATGGATCATGGCTGGCCTAAAAGCTAGAAAGGCCTCCTCAACTTCATC
AAAGCGAGGTTAGAAAGGCAACAACTTGTGGAGTAGTAGATCCATCCCAGAATCATAGTA
TGCCCGAAAATCTCGCAAAATTTGCAGCCTGGTCTATCTAGAAACCATGAGGATGTTTTA
AAAGATTACAGAACTACAGCAGTAGAATATTTGTGACTGCTTGGAAAATTATATAGAGTG
TCGTTCTTCGGAGTGTACTTGTGAATGTCAGCAGCGGATGCATTCAGTGGCGGCCGTCGT
TTAGCCCGTGAAACGGGAGGGGCTCGTCGTCCCTTCACATTCACAATGTCCCATGCTGTC
TACAGTGTTATACTCGCAGTAATTTTGGTTTTGGGTGAATGTGGTTAGGTGGAGGTGGAG
GCGCTTGTGATCCAAGGGCCCATGCTGGCCACCGTGCTGAGCCAGGTGAAGAAGCTGGAG
GCGTCCGTGCTGGTGCTCAGCCAAAGCAAGCCGTCCCCTTTCTGCTGGTAAGCATATCTC
CTACTGCTGCTGCTACAACCAACACAAGATGCATATACGTGCACACCTGTTTCCCTTTGT
CACGGAATCGTCCTGTACAAAGTTACTCTAAAAAGGAAGCAGAGAATCTTATTATACACT
ACATCGCTGGCACGGCCCATCACGCTGTAAAGCCCACTGTCGTCCTTTGCAAACAAACAT
CCTGAGAGCTTTGGGCCAAATAATGTTATAAGAGTTCAGAGAACTTACTGTAGTGAGTAA
GTTGATGGGAAGAGAGAGCCATGTGCCATCCATAAACCAGAGATGCCTTTCCCTGTCCTC
TCAGCTTAAACTCTACTAGTTGATGGATCGACTACGAGCAAGAAACCATGATGGGAGGAG
TACTGTGGGGCTACTGTGCACTGACCATTGCATTGCACCACTGCTGACTTGCTGCTGGTG
CTGTACTACTCACTCAGTCATGTGGCCGTGTGGCGGTTTTAAACCCCCCCACGACAGCGC
TCTGAAAAGTTACATTTTCACCAAGTAGGAGTAGTAATTAAACTGTCAATGCTGCTCTAT
TGTTGATGGTCGTTGCTGACAAGTTTTGTGTGGTTGCAATGCAAACTGGCATGCAGCTTC
CTGCGGAGCCGCGGCGAGGTGGTGGTGGAGGAGTGCATCAGCAGGGCGGAGTGCCTGACG
CTGGCGGTGCGGCGGCAGAGCAAGGGCGTCGGCGGCTACCTCGTCAGCACCCGGTGGCAG
AAGAACTTCTGGCTCCTGGCTTGACCTTCGCATTCGCACCAAGAGGGAAGCCTCCCGGGA
TGATTTCATTTTACTGCCGATTTGAGGCTAATAAGTGATGATCTACTCCTCCTTGTATGT
TTGTTTGTTTGTTTGTTTCTGTGCGTGTTTCTCTCTTCTCTCTCCCCCTCGCTCTGTGTG
CATGCTTGTGTGCGTGTGTGTGTGTGTCCTTGGTTGATCAATTAGCAATAACCCTCACTT
CGCTGATGTAAAGCCAAAACGCTGACCCCGCTTCATGTAACATATCTGTGCTGCTCCTGC
GCGTATGTTTGCTTGTTGTGTTTGAATCAGTACATACCGTGCGTGAGCTACTACCATTTG
TACTGTATAGTACGTATTACCCAGACATGTTTTGTTTATAGTATATGTTATTATTAACAT
CTGGGTTGAGTCGGTCGTTCGTAACATGTTCATAGACAGAAGGATGCCAACGTTGGCCGA
TCTCGTGCACGGTCGGGGACGAACACGCCTGCACGAGCATTGCACGTCTTGGAGACACAG
AAGCTTCAGCGCAGATCATACGCTGATCCAAAATGTCCACCTCGTGCGAACCATGTCCCA
CATCATATCACATCACATCACATCACATGGATCAATCAACGTTCGTGCGTGCATCGGGTT
CAGGTTCATACGCACGCGGCACGCACTGCCACTACGGTGTCCCCCCTTCACTTCAAGGAC
CCCAAGCAAGAAGAAGGACTGGCCGAGGCCACCGATCTATCGATCCACCCACGTACGGGG
ATCGACAGCTCCATTGGCCATGGCCCCCTTGAAACTTCTTCGCTCGAACTACTCCTACCA
CTCAAGAGAACGGTGTTTGCTTGAGTCGGAATCATTGCGGGCGCCGAGTTTTCGCTGCCC
GGCGGTATCATGACGTGCACTGTGGATGGCTAGCGGGCAGCCTATCCTCTCCTCCTACCG
CACGAGTCATAACTCGCTCGCTCGCTCGCTCGGGGAGGGGCAGGCTTTTGCTCCCACGGG
CGCAGGCCCATCATGCGCGCACAGCGCCATGATTCCTTCCTTCCTTGCTAGGAGTGGTAG
AGTATTCGTGGCCGTTTCAAGGCTAGCGCAACGACCGCTCCGGCTGTGGAACCATTCAAT
CCCGCCTGATTCCCGGCAGTCTGGTTGGTTGGTGCCGTGTGGTCTCCTCCTTGTTCGGTC
TCGAGAACGGGCATGCTGTTGCATGAGACTGTGATGGGTGGGGAGAGACGCGGGCCCGCT
GGTTCGTTCCTCACGTGCTACGTGTTTCGTCTTCCCCAGAGCCAGGGGTGTAGTTCCAAC
TCTGCTGATTCGGTGGGTGGAACAGCCGGGAGATTACCTGTTGATTCATGGTGATGGAGG
CAACCAGCGGGTGGGACGTGCAGCCACGGGCGCCGGGGGCTGATCCGACGGCAAGCGCGG
CGCGCAAACACCGTGCGGGGCTTCGCTGGCCGTGCGGGGCGACTGGCGCACCTACGGATC
GATTACACTGGTCGGAAGATGGGGAAAAGTTATATGACGCACCGGGGCGCCCCCGACTGA
GCCGGACCATTTCCTTCTTCTTCTGTTCTTTTTCTGACAATCAAAACGTCCTTCCTTCCT
TTTCTGTTTATTACTCCTCTCATCTCAAAATAAGTGTCTTAAATTTAGCATAACTATGTA
CTAGAGTTAATACAAAGTTGAGACACTTAGGCCTTCCGTAATGGTAGTATCTTGGCACAA
TATCATAGGCAAAATGCTGACGTGTCACTATATTTATTGAGGAAAGAGGAGGTTGTTGTA
TCTTA
