morexGenes - Barley RNA-seq Database

Contig contig_1573212

Source Contig contig_1573212

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_1573212 (2613 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1573212

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_16383	2	1414 bp	AK362199	Available	Available	None

CDS Structure of MLOC_16383

Contig Sequence (2613 bp)

>contig_1573212 2613 assembly3_WGSMorex_rbca.fasta
ATAGTCCTTGCCAAGATGAAGCATGATGCTTTCTTTGTAAGTGGTGACCTTGTAATTAGT
ATAATTCTTTTATTTTAATGAGATGGAGGGAAAGGCTGTCGCCTTCGTTTTGAAATGAAT
ATTGTTACTATTTTTGCAGGTCATTTTCCGAGCTACAGGATGGATCCGTATGTGATCCTT
ACTAAGCATGTGGAAATGCAGGAGCTTATGATGTCTGGTTGCAACCAATGGCAGATGGTA
GCATGGGATACATACAACTGGTTTGGATGTGGGTCCAAGTAGGTTGGCATATTTTCCTAT
TTTCACCGGTTTGTGACTTTTCACATGGTTGATTTGTACTTGTGCACTGGAGATTGATAA
CTTCTTCTAATAATTGGTGTGTGCATCGAAATGATGCAAACACTAGGGAAAATCCTCCTT
TTCTAAAAAAAGACTTACATAGTAGGCATGAGCATATAGAGTTTCGGCCCTCTTGGAAAA
TTAATATGGCATATCAAATGAAATAGACATACCTCTGTACCATATGCAGTGATCAGCTCA
ATGCTGAGAACTTCAACCTTGAAAAATGTAGCCCCACTTCCCTTTTTGTCGTCTTTCAGT
GGTTCATCACCTGCCGAAATTCCGGGAGCTGTAAGATTAGTCCTATGTTTCAGGAAAGCA
AATATGTGATGAATGGAAGGTTCATTTACAGGTTCGTTGCAACAACCATTTAATAAATGC
CTGGAAACCATGGTGCTCTCTTCAGCAAACGCAGGTCTCAGCTGACCCTCAACAACAAGG
CTTGCAGGTGGTCGGTCCAACCAATCTATACTTGATTTGCTCGCATTCTGACAATAAAAG
TTAAGAGCAGAGTGGCTAATAAAGTGATTCAGAAAGGGTGGTACATAAGCTGATGGATGC
TAATTGAGTTTCAATAATCTACCTCCACAATCATCCTCGCAAAGTATAGTGGATGACAAG
AATTTACAGTTTCAAGGTTGGACCAGTTAGGTGCATCATCATCTTCATCATCATCATCCC
CATCTTCTTCATCAACAGCATATATGCCCTCCTACATGTTTTCAGACACACAGCATCAAG
GTAAATCACTGAACTATATTGCTGTTGGCCAGTTTCCCAGCTGTGAAGAATTTTACTACC
TCCTCATATTCATCATCAGAATCGCCAGAATCATCGTCTTCTTCCTCCTCTTCTTCTTCT
TCTTCTTCTTCTTGTGCAAATGAAGTTGATGACGCTGCCGCTAGATCCAAGTCAGCAAAG
ACATCTGTGTTATCGAGTCCAATGATAACATGCTGCAGATACCAACAACATATTAACTTA
AGTGCAGGCACAAGCCACAAGACACAACACTACATAATTGACCTTTTCACGAAGATAACT
GGTTTTTTTTCGGGATTGAGAAGTGGAGAATTATATCAGAATTGTTACCCTTCATAAAAA
TAAATAAAAGAATTGTTACCGCAATCTTGTCGTCTCCCATAATGTTTTCCATGACCGCGT
CGTCGTTGTCGACCTCGAAGTAAATATCTGAGTAGATTGCCACACGTACGTAAGCTTAAT
GGAAGAAAAATGACAGTTGCACAAATTATGGACCCAAGTAACCAGCCGCATATATACCTC
CATTCTCGTCGGTCAAGTAGGGGAACTCGGGCAGGATGATCCTCTCGTGCACGCCGTCAT
CGATGAGCGTGGAGATCATCACCGTTGCATTGTTGTTGACCTGAGCATGCATATTGCACG
ATTCAGCACTGGAGACTCAATTTTATTGACCGAAAGCAGTAGGATTTTTTTTCTTCCAAT
TTTTTATTTTCTTTATGGAATTGTTCTCAAGTAGAAAGGAAAACATACCAATCAGGTGGG
GAAACACAAATCAACTAAAAGACTATCTAACCCTGAGGTGGGGAAACACAAACCAACTAA
AAGACTATCTATTATTCATAGATCAATCTTGTTTATCTGAAGTTAAAGACCGATGGTTCA
GTTGTTTATCTGAACAACCAAAGCTGTCATAGCCTGAAATTCAGAGTACGCTTCAAAACA
GACAGGGGCAGATAGAATAACTCCCGAGGGTCATTGCATTGCACTGCTGAATACTTCTGA
CTGACCGTAATAGTCTCCTCGCACTTGACAGAAATGCAGTGCAGAAGACTCTAATGGACG
GAGCAAATTTTCTGACCTCCACGATTGTCCGGGCGGATTCGGCGTCGGTGAGGCGCGCGG
GCTCGCCGTCGTCGAGCTGAAGCGTCTCGGCGATATCCTCCCAGGGATGGTAACGGCCGC
CCCTGCCCGACGGCGGCGGCGGCTCGCCCGGGTGGTCCGGCGTCGCACCGGCACTGCACC
GTCCACACAGCCGAATTCAGCGACTGTAGCACTGACAAAGGCACAAAGCACATAGCAGGC
GCGCACACATTCATCCGTATCATGTCACATCATATCATACCGGCAATGGCTGCTCCGGCG
CGCGTGCGCGCTGTTGCTCCAGGAGGGGCAGTGGCAGCGACAGCGCGAGGAGTGAGGCGN
NNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGCGCGGTGGCGGGGGGCGGGCTTGGCG
GGGGCCAAGGTTCGGGCGTCATCGGGGTCTTCG