Contig Data
morexGenes
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Map Locations of contig_1573203 (3228 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1573203

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16379 3 1162 bp AK360886 Available Available None
MLOC_16378 1 854 bp None Available Available None





CDS Structure of MLOC_16379






CDS Structure of MLOC_16378






Contig Sequence (3228 bp)

>contig_1573203 3228 assembly3_WGSMorex_rbca.fasta
ATTATAAAAACTAGATGAATAGATTATTAAAAACTCACAATCTACTCTGCCCCAGCTAAA
ATCAGATTATAGATTGCTAATGATCCATTACTCTTGTAAAGTTGGAGATAATTANNNNNN
TGCCACCGCCACCCTCCTCTTTAAAAAAAGGGAGGACAAACAGGTCATTATGCAATGTAA
AACCCGAATTACAGTTTATATAATCTGGCCTTCAAACATGCCCACCTAGATTATTATTAC
AAACCAGATTACATAATCTATCTTCATAATCTAGATCATCATAATCTATTGTGATTCCAA
ATAGGGCCTAAGTTGTTGCGGAACCAGGTAACAAAGGTTTAAGTCTAAACTTGTCATTGG
TCCTCGTATTTTCTTGGATTTATTTTAGACTTTCATATGATAATTTACTGACGTTCTAAG
ATGCGTGTGTGTTTATATGAATGATTATATGCGACGGACCCCGTGTTTTTGAGCCCGAGC
TCAAATGAGCTCGAGTGAACAGCACCTTCGAAAAACATTTGAAAAAAGTTCAAAATTTTC
TGATTTTTTGGGGGTGCAAACATTGACAAAAATTTCTCAGTACTCACAAAATTTCATCAC
AAATAACATTTGTAGAAGTCGTAGCAAAAAAAAAAAAAATTGATGGTCCAAAACTGTTAT
TTTCGTTAACATTTTGGAGTACTGATTTTTACGACTTCTACGAATGCCATTTTTTAATGA
AATATTACAAGCACTGAGAATTTCTGTCAATGTTTACACCCAAAAAATTCAGATTTTTTT
TTGAAATGTTTTTCATTTATTTTAGATTTTACCGTTCACCCGGAGCTCAAAACGATGACT
TCTGTGTATGTGAGCATCTGCAGTTTCTAAATAGACACAACAAACAAAAACTCTAAGACA
CCGCTTCAACTAGATGCACCTATCCCATTTTAATTGAATGCATCTTAACTGGAATTCGCA
GCCACTGGAGTACGCCAGCATGGATCAGTCTCCAATTTGTAAATTTGCGTTGTGCTAAAA
AAAGCTACAGAATTTGTGCTGTGCTGATGCGAACAACGAAGGCAGAATATTTGTAAATTT
GCAAATCGCCAAATTGGATGAGGGCGAAATATTTTGAGATGCAAGTTTAGGTGGGTCACG
TACTACTATGCCGCCATTGCAGCGCCGCCGGCTGCACGGGCGCGAGTCGCCGCCCGCCGG
CCACGCAGCGTCCAGCTCCCGCCAAGGACGCGGCGGCGGCGCCAGACGCCGCCGCTGCGG
TGGACACCTTGCCGCCGAGCAGCAGCAGCTCTGCCCGCATCTCGAGCGGGAACGTAGGTG
GCGCGGATAAGAGAAGAAGATGCGTGGAGAACGAGTGGACTAGTGGGCAACGGACGAGAC
CGGGGGCCTGGTGTCTGGTGCCAGATAAACATCTGCCATGGGGACAAACAAGCATGTGCA
CTGGCCAAACCAGATCAGATCGGACAAGGAAACCAGGGACTCTTGCCCCATGTAACAATG
TTTTATTTATACAAAACCATGTGCCCCATGGCACCGTGTTTTAGCTGATAATAATATACA
ACAATGATCAATTTACAAAACAGAGTGCACGGTGTGCAGGCTTATTTCCACGGATCCCAC
AACCAACCAATTTGGCAATCTCCACGCACGGAATGTACAGACCTGAGCAGTTCTTCGGCC
TCATCCAACCAAGCACTAGCAAACAACGTCAATGATAACATATAAACCAATAGACCATAG
ATAGTGTTGGAAGTGTGCAGTGAATTTGCACAGGAGTGGACACAACAACACGGTGGCAAC
CTCAGAAAACATGATGCGGAACGCAACAACGAATGTTTGTTGGTGGAGGATGGGTCAGGT
GCCCTTGATCACGACGACGGGGCAGCCGACGCTGTTGATGCAGTAGTTGCTCACGCTGCC
CAAGAACATCCTGTTTTCGATCAAAGGAATCGGATCAGCTTGTGTCTTTCATACACGAAA
GGTAATTATCCTAGAAACTTCATGATCTAAACACATCTACACCAGATTACTAGATGAACT
GACCTAGAAGGCTGCTAGATTACTGCTATACATGACCGCACTAAAGAATGTGAGCATGCG
GTTTTTGCTGTCAGACTCAGTTATCAGTTTTGGCTGTAGAATTAGAGTTCTTCACTGTGA
GAGAAGCAATGCAAGTTGTTTGCAGCAACTAGTAAGACATAAACAAGTGAAAGAGATGCG
TTACAGATCAAGAGAAAGTTGTGTGTACAGTCTCATGTCTGTGGGAGTAGATGTAACATA
TACTAGTACTTTACACTGTATCAGGTTCAAACACTAGATGATGTTTATATTAATAGCACA
ATTTTCTGATAACCCAGTTTTGCCCAAATATTATAGCGCGTTGCAGTAAACACAAGCGAT
ATCTTCATTCGAATTTGGATTCTGGAACAGACGGATTTCACCACAGGTGTTGTACCGGCA
AGAAAACTGAATTCGGAAACCGCAATTTCGTTTGCAGTTCGTGTTTGTGTCAGGCAGCAA
GCCAGCGCCAGAACAATCAGACATTCATCAGCTAACCAAAGCGCAGAAGACAGTGCTGGT
GTTTCAATTTACCTCTTGACAGGGCCAAAAGCACGGCACCCCATGACGAGCAGATCGGCC
TTGAGTTCGGCCGTCACCTCGCAGATCTTCTCCTTGGGATCCCCCACCACCACCTGTGTC
TTCACCTCCACCTTCAACAGACCAAGAATCCGACCCAATTTAAGCACCAATCAAGCAAGA
GCAGCCGGGCTAAATCACAAGAATTCAGCAATCGGCACAAGATAAATCTTCGTTTAATCG
TCCCCTTACATTCTTGTCGGAGCAAATCTTGAGCGCGTGCTCCAGGATCGCCTCCGTGAT
CCGCCGCTGGTGCGACTCGATGGCCTGCGTGAACGCCGGCACCTCCGCCACACCTGAGCA
GCCAGCGCCGCGGCCCACCGAAGCAGCAGTCAGCAGGCTAGCGGGCGAGAGCAAGGACGC
GCACGCGTAGAAGATGGGGATTGCGAGGTTGCTTACTGGGGCCGCCGAAGGGGATGGGGC
CGGGGTTGAGGCCCGCGGCGATGCCGGGCGGCGGCTGGACGTGGAGCACGACGAGCGCGC
CGTCGGGGCGGAGGCGCAGGCTGTCGAGCGCCCAGCGCAGCGCCTTCATGCTCTCCTTGC
TGCCGTCGACCGCCACCACCACGTTGGACAGGTTGGCGGTGGCCATGG