Contig Data
morexGenes
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Map Locations of contig_1573175 (4976 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1573175

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16366 1 1013 bp MLOC_16366.1 Available Available LOC_Os02g30624.2, FRAME:-3, EVALUE:4e-28, 13102.m03346 protein LSM domain containing protein, expressed
MLOC_16365 1 1641 bp None Available Available None
MLOC_16364 1 554 bp MLOC_16364.1 Not available Available None





CDS Structure of MLOC_16366






CDS Structure of MLOC_16365






CDS Structure of MLOC_16364






Contig Sequence (4976 bp)

>contig_1573175 4976 assembly3_WGSMorex_rbca.fasta
AACTAAATGAAGATGCAACAAATAAAAAATAAGCACACGACGGAAACNNNNNNNNNNNNN
NNTCTTCTGAAACGTCGGTCTCGGGCTATCACATTGGGTTCGAAAACCTCCTGTGAAATC
TCCAGAATTCTCTTGACCTCCTGAACCATGGTGGAGCTGCAGTTGTTTGAGAATAGGATG
GAACACTTCGACGGGTTGATAAGTTGGCCAGTCGCCGCCGCAAATGTGTTCAACAAACCT
TTAACCAGAGTTGCCTGCTGAGAAGTCGCCTGGAAGAACATGAGAGAATCATCCACAAAA
AGGTGGGATATCTCTAGAGCGCCCCACCAGATAGTGACCCCATTAAGGCCATCCTCCCGC
ATGGCTTTCGAGATGAGCAAGGAAAGAGCATCAGCAACAAACAAGAAGAGGAATGGGGAC
AAGGGGGCACCTTGGCGTAGCCCCCTAGAAGGGGAGAAGGACTCCAACAGCTTCCCATTG
AACTTCACCGAGTACTTCTCCGAAGAGACACAAGCCATCACACGAGAGATCCAAGGCTCG
AAGAAACCCCACTTCGTCAATGCCTTCTGTAAAAACACCCAATCAACACGATCATATGCC
TTAGAGAGATCCAGCTTGTAAGCACACAAGGCCGGAGCACAGGTCTTGACAGACTGAATA
TGATGGATACATTCGAAGGCGATGATCGAGTTATCCGAGATAAGGCTCCCAGGGATGAAT
GCGCTTTGATTTTCAGAAATCAGCTAGGTTAGGAGGGGACGCACCGATTAACCATGCATT
TAGACACGATCTTATATAGGACATTGCACAAGCTGATGGACCGAAAGTCCTTAAGCTCCT
TAAGGTATGTGTGGGTGTTCTAACTGGAAGCTTTGACGCTCAGATTTGGTATGTCCCTTA
GGATGCAATCTAACTCTTTATTAACTCCTATAGTATGAAGGTCATTGATAACATGAAGAA
TAGAGGATAATCAACAATGGCAGGCTTTGACGATTGTTACTATACTAGAAGGGTTGGACG
CACTTTGTTGCGCGTTCGTGTTGTACAATTTCTTTTTAAAAAATCTCACTATGTTTCAAA
ATGTAAGTTGTATTACTTTTTTTAAGTCAAACCTTTTAAATTTGATCAAATTTGTATAGA
AATATATCAAAATCCATAATATCAAATCGGTATGATTAGATTCATCATGAAACGAATTTT
CATTTTATTTTGTTTAATATTGTGGATGTCAATGTTTTGCTTTGAACTTGGTAAAAGTTT
TAGAAATTCGACTTTCCAAAAAACTAACACCCTTTATAGTTTGAACTGATAGGATATTTA
GTTTGCTGGGTGACGGAGATGATTTAGCGTGTTTTATTTTTATTTATAATGTGATGATTT
GGTGGGTCTTTCATGATGTGATCATGCCTACCATGTGAGAAATTTTATGCAGGGAGGGAA
AATTTTATGTCGATGGCTGCATGTTCTATATTGATAGTATAGTATTACATGATGATACTT
GGGTGCGCCAGATTGATATGTTTTTATACACCGATTGCTGCTGATTGATTTGGAAAATGG
TTGACACGGTCAAAATCGTAAGCCAAATTCAAAATTGAATACCTCAATTGAATGGAAGAT
CTTCAAAATTAGTAAACATAGTAAATTGAAAAAAATATGACAAAGTGCACTGCTCAGTAT
GGAGATACGCAGTTGGCAATCAATAGCGTGCAATAAGAGGAGAAAATTATGCCAAAACGC
ATGCAAGATACCATTTCGTCGTGGCTGACACCTATTGTAGGTTTGAGAGCAAAGCGCCAA
CAAAATCAACGGTGTTAGCACACTGGGTGTGTAATGTCTGTTCTATGCAGCTGCAGCAAC
AAACAAGCACACGGCCATGGAAACACAAATCTTATCTATATCGAACGCAGAATCTTGGAC
ACAAACATCTCAGAAGCTAAAAAACACAGATAACATCGAGTCGAAATGGTTCCAGATAAG
TCTCCGTCAGCAGGCAATATAGCAGACAGCAGGTACGAGAGTGACAAAGGCAGCACCAGT
CAGATCACCAGTTCACCACAACCAATAATCGGGTTAACGACCTTGAAATTACATGATGAT
GATGATGATGATGTGAATGCTCCACTTGGCCTATGCTCCGTCGGTGAGGGGCCGCTTCGA
CGTGCTGATGTAGAGGACTGCACCCAAAGGAGAGGCATCAGAATGGAGAAAAGGCAGGCA
AATTGGAGTTTGATTGAAATACAGGACATACATACCGTTGTTGCCTCTTATGAAAGCGTC
ACCATATTTGTTCTTCAGTTGGCCGTTCACGTACTCTTCGGTTTGCTCCATCGCAATGTT
CATATAACCGTCCAGGCAAGCCAGAATACCTGGTTCAGAGTTGATGTAAATACAACGCTA
TCATTAAATTTTGAATAACCATGTTCCAGATCGGAGTTCAGCGATGGTTTTAGCGAATCT
GGTCACTATGTACTTTTTGTAATTATAGTTTTAAAGTGCTACAAAGCATGGACATGCCAG
AAATTGCCGACTGGCCGTCCTGATACGGCGGGACACAGCGACATGGCAGGATACGGCTGG
ATTTGCATATTCTGCAGTATCCCTTGGACTCGGTGGGATAGGTTACGTGACACGCCTAGC
CTAGGACACGGCTCAGCCCGATACCTTGAAGCGGTCGCACGCATGCTCTCCGTATAACGA
GCTTCTCACAGCCTCTCAGACAGAAATGAACGCGCCGCCGCCGCCTGGAATTGACCGGCG
ACCACTACCCCCAGCACCAGCAGCCTCTCCTCGCGATGGCAGGTAACCCCAACTCCCCAA
ACCCAGCAGCCTCTCCTCAACCTCTTCATCTCTTTCATTCTGATTTCTTCCATTGAGCTG
CTGGCTGCTGCATGCTGCTGTTTGCTACGGTGCTACCCATGCTGTGCTGCACTGCTGCTT
GTTGTTAGATAGCATGGCATCTGGGAGCGCCACAACCGATACAGGCAGCCAATCGTCTGT
GGGTGAGAGTGAAGGACAGCCTGGTCCTAGTGCTGTAGATCCCAAGTATCCTGTGTGGTC
TTCTTCAGTCTCTAATACTTCCTCCGTTCCTAAATANAAGTCTTTCTAGAGATTTCACTA
GGTGACTACATACGGAGCAAAATGAATGAATCTACACTTTAAAATGTGTCTATATACATC
CATATGTAATCTCCTAGTGGAACCTTTTGAAGGACTTATATTTAGGAACGGAGGGAGTAC
TAGACTAGAGTTTGATGTGTTTTGCAAGATGCAACTTGCAATGACATGGGACTACGGGGG
ATCAATCAAGCATTTGATAATGGAGACACCAAATGGGACAGTATTACAATCTCTTTCTCA
TTATTATTTTTGTCTTGATTCTATATTACATGGCAGATCTTTTTATTTTATTTTATATAT
ATTCACCATATCCCCGAATGGCTGTTTTTTTGGAAAAATGCCATATCCCATGTCACCGTA
TGCGTATCACCATGTCTTCATCCCCGTATCCGTGCTTCTTAGGTAAAGTGCAAAGTTTGC
AGCAACTGGTCACTAATGCACATAGCATACACAAAGGTTTTTCAACACGAGACTATGAGG
GAAGACAAAAGGGATGAAAACAAAAGCACATATCATTATTTCAGGAGGTTATTAGCTTGA
AGAAGGTATCCAGCAGCTTGACACTTGACCATTCTGCTTGCCGTTTACAATTAATGACAT
AGTCGCTTTTGCTGCAACAAGACTATGCAGTGAGCAATACCATCTGTTATCTTGCTATTC
TAGAATGGTTATTACTTATTATATTTAACTTGGCCAGTCTTACTGATAAACAGTAAGCTA
GTACTCCCTCCGTCCCAAAATNNNNNNCTCAACTTTGTACTAGCTCTAGTAGAAAATTGT
ACTAACCCTTAAGACAGTTATTTTGAAACGGAGGGAGTAATAAATTGCAGATAAATGTAA
ATTAATGGGCACCCTCCTCGTGTCTAAATATATATGTTTTGCAAAAAGATAACCATTACC
ATTTCCATGTATCCCAAATGTTAAGTCGCATGGATTGACAAGGTAAATGGATATTGTCAA
GAATACAGTAAGGAGGGTAGTTATTTCTTTACTGGAACAGAACATTAGCACAAATACGAC
CAGAGGCAGACAACTTTATTGACCCTTTGAACTTACTAGCGAGGCACTCACTATAGCAGT
ATAGCTACAGTACACTTTTACCATTAATCACTATATCTTCTAACATTTGTATAAGCTACA
ATTTTAGGCTACTCAATGGAGCTGTTAATTATCTGACACGGTACTAGCTACAGTTCTTGC
TGTGCAGTGCTTAGCAGGATAAATCCATGCCCAGCTGAGGACTGAATCCAACCATTTGAT
CCAGGTGATTCATAACTAGATGCTTGGAGTTCAGGTCCTCACGTGTAAATACCCTACCCC
ATATTTTAGAATTTTAATTAATACAAATTATTCAAGTCTTGAAGGGTTACTCAAAGGGTC
ATCCAGAGAAGGACTGCGGCAGCAATTAAATTAACTTCTGTTGCACATTCCATACCCTCA
CTTTTACCTAATACAAATTGTGGGGGGAATCAACCTCTGAAACAACTAGGATACTTGGCT
CAGTAGCATGTTATAGGTGAAGGAAGTGATTGCTGGAAGCCTGGAACTACCTAGGTGAAA
CTGAGAGTCAATTCAACATAAAGCAAGCATGCACCCAAAATCCACGAAGTTATCTATTAA
TTCCATGATTTGTACTTGATTCAAGCACATGAAGTGTGACAAGTTCTCATATGCTAATGA
GTAGCTGTGCCTCAGGGGGTGACCGAGTGAATAATTCACATTTTTCCTTGCTCGAGATGG
CTCCCGCTCCGCTCCCGCTCCCGCTCCGCTCCTGCCCTTGCGCCTAGTCTAGCCTCGCCG
CCCCCCGCCGCCACCGCTCGCGCCAGCGCTCCGCCCCCGTCCCCTCTCAGGGCCCG