Contig Data
morexGenes
Links



Map Locations of contig_1572847 (5877 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1572847

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16246 1 3059 bp AK368027 Available Available None





CDS Structure of MLOC_16246






Contig Sequence (5877 bp)

>contig_1572847 5877 assembly3_WGSMorex_rbca.fasta
CGGGCGGCGCTGCGGCCGGGGGCGAGCCGCCGGGGGGGGCGGCGGGCGGCGGGGGCGCGG
GGGGGGGGCGGCGGCGGGGGGGTCGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGC
CGACGCCGCCGACATGTGCGAGGACTGCGGGGCGCCGGCACCGTCCGGGAAGGCTCTGCT
GTCGTGGATGCGGCGGAGCGAGCTCGGCGAGCGGGACCTCGCCTGCGCCTGCTGCGGCGT
CGCGCTCGAGAGCGGCTTCTACTCGCCGCCCTTCCTGCTCCCCACGCCGCCGCCGGCCGC
GCGCGACCTCGACCAGGACGGCCACGGAGACGTGGTCTTCGTGTCCGAGGACGGCCCTGT
GATCGAGCTCTTCGACGAGAAGCCATTGGTGGAGGATGATTCCATCGCTGTCATTTCGGC
TCACCGCGCTGGCATTGCCGTCAGCGTTGAGCGACCGGTGCCGCTTGAATCCATTGACTC
CTTGGCCGACGGTGTGCCTGAGCTGTCATCTGAGCCCAGTGGTGAAAGGAAAGGAGCAGT
CGATCATGTGACGGTGGAGCAGGACTATGCCGACGAGGAGAAATTTGTGGTGGCCTCTGA
TGTTCAGCACTGTAAGTCAATCTTCTTCCTTTGGATAAACTGTACTCCATTCTTTGTATC
CAATCTATCCACGCTATGGCTGCACATTTATTTACTGTGCCAAACATGTCCACTGCATAT
CTGTTTGTTATGCCAGTCATTTCAGCAGTAGAGTAGAATAGACAGTGTTATTTCTTGCAA
ATTGTTTTGTGACTATTATTGAGATGGTCTTTGAGTCTTTTTATCTAGACTTCTTATTTT
AGCCGATATGATACTTCCCATGTGATATGCTAGATACTAGCATCTGTATTGATGAACCTT
TTAATGAAACTAAGAAAAACTGCAAGTGTCCTTGATAGCATGAAATGGACCTCTTATACA
CATGCTCTAGCTAATTGCAAGAATAACTGGAAGAATAACCTTATATGTTCTCTCTATCCA
ATTTATCCATGCTCTCGCTATAGTAATAACCTATCTTTTCAATCGCTCCACTGCACGTTT
ATTTACCGTATAGTATCTGTTTGCTTTCAGTAAAGTAGAACAGACAGTATTATTTCTTGC
AAATTGTTTTGCGACTATTCTGGAGATGGTCTTTAAGTGCTCCTGCCTAGACTTCTTATT
TTAGGATTTTAGCTGATCCATTCCATGAGATATGCTAGATTTTTAGCATCTGTATTGATG
AACCTTTGATGAAACTAAAGAAAAACTGGAAGTATCATTGATAGCATGAAATGGACCTCT
TAACTAACTAGAAGCGATTCTTGTCATCTATGGTCCTTTTATTTGTTCCGTGCTGATAGC
TTTATTGTTTAAGCTTAATAAGAAAACCATATTGATTTTAAATTTTACACGCAGCTCCTC
GGATGAATGATGGATTGAAAGGTATGTCATTATCAGAGGATGAGGAAGTTGAACAGGGCA
CTGTGGAACATGAATTGTTTTCCATGCCATCTGATGCCATGGAGCATGGATTTGTTGTTG
ACAAATCTGATGGAAATACTGAGGAGGTGCCGGTTCAACATGCTGGGATAAAGGATGAAT
GTGACGCTGTGCCAGTGGAAGGCGGGCCACATGACTCAGAGGCTTTGAACGAGAACACTG
AGGAGAACCAGGTTCAACGAGCTGAGCTGAGTCGGGAATTGGATTCGGTAATGATACATC
CCAGGGAGCATGTCGATGAAGAATGTGGAGAGGATAAAATATCACTGGCTGAGTTAAAAC
AAGAACTGGAGTCGGTGGCACTTGATTCTTGGGAACAAGTTACTGAGATTTCAACTGAGA
ACACTGAAAACCATGTTGAACAGCCTGAGCTGATGCATCTGTCCGCTTCTATGGCAGCAG
GTGTTCTCGAGTCTCCCGGTGTTAATGCCACCACAGGCCAAGGTAAAATGTTAAGGCTAT
AAGAGTTTTTTGTTTGTTTCAAGCTATTTGCTGCATTTTGATTTACTTGTTTAATACGAT
TGGCTACATTTAAATACATTTAAAACAATTCTTATCATTTTGAACAGATGATATTGAAGT
TGATCCAACTGAGTCTCTTCTACCAAGCTTGCACCAACTTTCTGATGGACATTCAATAAG
TTCAGACAAATCATCTCCTGACTGCAGCAATGTTGAAGATAAGAGAGTTTCTGATACACC
AGCTCATATTGAAGGCATCAGTTATTTACAGGAATCGCCAGACCCTGAAGCAGCGACCAC
TGATACCAAGTCTCTTGATTCAAGTGTTGGTAATATGTTTACTGATCTGGAAAGCGTTGA
GCTGGTGACTGTTGAGCAACTCAAGTCTGCTTTGGGAGCCGCTCACAAATCATTGAGTAC
GTTATGCGCAGAGCTTGAAAACGAGAGGAGTGCAGCAGCTATAGCTGCTGATGAGACCAT
GGCAATGATAAATCGCTTGCAAGAACAGAAAGCTGCAATGCAGATGGAGGCGATGCAGTA
CCAGCGGCTTATGGAAGAGCAATCAGAGTATGATCAAGAAGCGCTGCAGAGGCTGAATGA
TCTAGTTGTAAAGAGAGATAAGGAGAGGCAAGATATGGAGAGAGAGCTCGAACTGTATCG
CCACAAGATTCACCTCTATGAGGCGAAGGAGAGGAGGAAAATGTCCAGGCACAAAGCCGA
TGACCAGAATGGATCATCCTCAGCTTCATCAAGTGCTGAGGACAGCGATGATCTTTCCCA
AAGTTTCTACGAGGGTGATGAGTCTGCCCATGGTCTGAATGGCAGCAATGGCAGCAGTCC
TACTGATGTTGTTTTACATGAAACTGCTAGTCATATTGTTACGCTTGATGGCTCGCTAGC
TGACTGTGAGGAAGAGAGGCTCTCCATATTGGAACAGCTGAAAATGCTAGAGGAGAGGCT
TTTCGACCTCGAAGATGAAGAATCTGACAACTTGAAGATGGACAAGCATTTCACAGAAGA
TAATGGTGCCTCAAATGGTTTCTCTGATGAGGATATCAGCTTCAAACTCCATGATAGCAG
GAAAGGCGTAAGCCATGGAGGAAAGAAGCTCCTCCCTCTGTTTGATGATGCTACCACGAG
AAATGGGAATGGCCTCCTAACAAAGCAAGATACCGAGGCAGACCCTTCAGCAGAGGTCGT
GTTGGAACTTGCCAAGGAGCAAGATAAGCTTGCGATTGCCAGTGAGATCGATCAAGTCCA
CGAGCGCTTGCAAGCTCTCGAGGCAGACAAGGAGTTCATAAAGCAGTGTGTGAGGTCCTT
GAACAAAGGAGGCAAGGGCTTTGTTCTTCTTCAGGAGATCTTGCAGCATCTCCGGGACCT
CAGAAGGATCGAGCAGCGTGCAAGGAACAACTCTGGAGAAGTCTCGCCCCACTGCGTGCA
TCCTTACACGGATTAATAAAGGTAAAGAAACGCGCGCTTTTTATTTATGGATTGCTAAAA
ATATTCTATTGCACATGGAGTATGGTACAATCATTGATTCTTTTGTTTAGACCATAAGAG
GATTAGTTTAGTGCAACGTGCAACTTTCACAAGTTCATTATTTCCATGCTCAATGAATAG
ATAGAATGCTAACACTTTCCGAAAGGAAGCTATATGCACTCCACATTCCCTTTTTATGAT
AATACTTCAATTTTTCACCAAACTTTCCCGCCTAACAAGACCGACCACATTCTGGCTTTG
ATTGCTTGCTTCTTACAGATGAGCCGCGGAGCCCCGGTAGTGTTCGACGACAACGCACCA
TTCGAGATGAAAGCACCAACAATCCGAAAAAGAAAGTGTACACACCACCACCAACGACGG
CGAGAAAAGCGAGAGTTTGGCGACTAGCTTAGCATAGCCAGGCCAAGAAGAAGCTGGGCT
CTGCCATCTCAGGAGGGGAAGGAGCTCTTCCTGGAATGGCGCACGGCGCATCCGGTTCGG
CATCCGCATCGCCATCGGAATTCGGGCGGCGGATCGTGCCGCAACCCTGCCTTGTAAGGT
TTTTTTTGGTGGACCGCTTCCCCCCCACCCACGTTGTGCCGTTTAATTTGCATCTTGTGG
GGTTTGCGCTCCGAACTTTTGCTGGAGGGCGAGACGGTTGGTGAGCCGCCCACCCCCCCA
TGAGGTGTGTTTCGTGGCAGAAATCATGGCTTTGCGAGACAGGGCTTTTGGGAGTGGATC
CATTGATTAGTTAATTAACTGGAAACAAACAGGCCAATGCCAGCTCTGGTTGCCAGGCAG
CACAGGATGAATGGATACAAAAAAGAAAATACTAGAGAAAACATTTTTTTATTATTTTTG
GTTGGCCTCAGTGGGCTTTTCTGCTGTATAAATCTCATGGTTTTGTATGGAGGAAAAAAT
ATGCGAGGCTGGTTTGGGGTGCTTGGCATGATTGTGTTTGTGTGATGCGGCTCCAGCTTG
GCTCTCACTTTTCTCCTTTGGCTTTGGGTTTTGGGTACTATCTGGTCTAGTATGGTGGAC
CGCTAGACCTTGCTTTTAACCTTTTGATGATGAGATCCATGTCATGGGATGGATGGATGG
ATGGGCGCGGAAAGCGACGGGGTTCCGTCGGATGATTGGGTTTAGCGGCTCCGGGATCGT
CATCAATTCATCATGGATGCGGCTCTGCTCACCGAACAATCTGTTGTTGGTTGGGGTGCC
CTACCATGTTGCGATGCACGTACTACTACTCTGCAATGCCGATGCAGATGCAGATGCAGA
TGCAGTGCATGAACCTTGTGTCATCCTGTGCATCGTATCTTCTTTTGCAGTGGTACTGCT
GCGTGCTGGACACTGGAGAAGAAGAGCTTCTTCCCCCCCTTGGATCCATCCATCGGACCC
GGTGGAGCTGATGCGAGGGGGACGCTTGCTTTGGGTTAAAGGTAAAGCACGGGTGGGATT
GATGGAGCATGTCACGGCTCGTTCCTGCCTCCTAGAATAGTAGTGTGGTACGTGGAGGAT
GGTGCTGGTTGATGGTTCGGTTTTGTTCCCGGCGGGACGACACGAGGCGACGCGGTGGAG
AAGAAGAAGAAGTTTAGGCTGCCACGCACGGCGGAGACGGAGAGGCGCGCTGGGACGAAT
GACAAGGTAAAACCGTCGGTTCGATGGTCCAGATCAACCACAGTGCACGGTACCGGTGGC
GTGTCGAGGGTTGTGAACGTTACTATTGCTAGGTCGTAGCGTGAGAGCGGGTGTGGTGCA
TTAGGCAGCACTGCTTGCAACGGATGCAGGATATATATCCTGTAAAGAATTTCCCTTGTC
TTCTGTGAACATATTGGTACGTCATGGAAGTATTTCTTCAGAAAGAAATCGATTTGCCAC
CGTCAATCGAAAAAAACACGCTGCCGTCAAGTCCATGAGCCGATGGGTCCTGCTGGTTCT
TTTTGTCTTTCAACCTGCCGCCTCTAGCTACATCTTCCCTACCGCGTCTTGATTGTCCGT
GACGACGACCACAACAACAATGTGAGTAAAGAAATAGAAAGTTACACGGTATTGTTCGTT
GTAAAAGAGAGAAGACTGCCGCTTTTCTGCACCCGAGCTTAGAGCAACTCTAGCAGACCG
TGCATCCGTCCGGCCCGTAAAATGCGTTTGCAGTTCGCGCAAAACCACTTCTGCGGGCCG
GCGCGGGCTGGCACAGATGCAGGCCCCGCATAATGAACTCGTAAAAAAACATATTCGCGA
AATATACTTTTTTACGGATCGGCTCCGCGGGTTCTGATCTGGCGTAGCTCCTCGGGGCCC
GTAAAACTTAGATTTGCAACTTAAATTGATCTAGCACAATGCTTTTCTTTGCTTTTGCAA
CAACATTGGATACAAAAGATATCACCAAATCTTGGCTAGAATAGCAAAACCAAAGAA