Contig Data
morexGenes
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Map Locations of contig_1572753 (3811 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1572753

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16209 3 1078 bp MLOC_16209.1 Available Available LOC_Os06g40710.1, FRAME:+2, EVALUE:8e-71, 13106.m04241 protein Myb-like DNA-binding domain containing protein, putative, expressed





CDS Structure of MLOC_16209






Contig Sequence (3811 bp)

>contig_1572753 3811 assembly3_WGSMorex_rbca.fasta
TATTACGATCCGATCTCCCTCTCGTAGATGAACATCGTCATGATAGGTCTTCGTGTGCGT
AGAAATTTTTTTATTTCCCATGCAACGTTCCCCAACATCCACATCGTAGCTTAAGGTGAG
CTACTCCGTCTCTCTCTATAAATCTGCTAAAATAAGTATGCAGCATGCATTTTTGTAGGC
AATACATGCCCTGGCTCTACCTTCGTTCCTCGCCACACTTTTTTTTTCTCCCAGCAACAA
CCCATATCCTTCCACCTCGCCTTGTACTCCCTCCTTCTTGCCTTCACGGCGTGCTGCGAG
CCTGGAGCGGCGGAGTTCATAGCATGGACGACAAAGTTGTGAGTGCCTGATCTCATCAAA
GCTGCAACCAATAGGAGCACTAGCGATCCACGCAAGGCTCCTCGAGAGCTGCAATGGAGT
TCGTCAAGGTCGTCCATCGATGCTGCGATGAAGCTACGACATGCTGCCGGTGCTGCACTG
CAGCTACAATGAAGCATCGTAGCGGCCAATGAAAGCTGCAACGGGAGCACCGTCGTGCCG
GTGTCGGAGTTGCAATGACGCATCACGGGCTCCCGTCGGTGCTGCGATGAAGCTACGACG
ACATGTCGGTGTCGCGACGGAACATCGCCGCACCGGCGTTGACGCAGCAATGAAGCATCT
CCGGCTCCCATCGATGATGTGGTGGAGCTGCAATGGACTGCAATGGAGCACCTCCACGAC
GGTGTTGGGGCTGAAATGGAGGATCACTATATTGTCGTTTGCTGCAAGTCGGACGAGGTG
TGTTGGTGCTGCGATCCAACGCTTATTGGGGCCGCCGTACGGGGGTGTGGCGGTGTTGTG
CTCAAATACTTGTTGGGGACGCCGGTGGACTGATGCAAGAGAAAACAGGGGTGTGACGGG
TGTTGCGATCGACCAGCTCCATCGACGGGAGGGGGATGCGCATCTGCTGCAGTGAGCCGA
CCAGAGCTGTTTTTCCATGACGATGTGTGTCGTTACTTTGATGCGGCTGGAGATCGATGC
GTTAAGGAATTCAACGGCTGCGGAGGGGCGGGGTCAGATCCGACGACTCGGGATGATTTA
TAGCAGCGTCCCAAAAGAAAAAGAAAAACTAAAGGCGGAAGGTGCACTCCACTTGGGCGA
CACGCGTCACGTGAAGAAAGCCATGTCGAAGGGCACCCGCAGGCCGCAGCCCAGTCCTTC
TCTCCAATTAAACATCGAAAAAGAAAAGGAGCACCTGAACCCATCGAAATCTCTGCTCCC
AGGAGGACAGGGCGGAGAAAGGCAAATCTCCCAATCCGTGGGAGCCATCGGCTGGCTCCG
ATTCCGCGCCAGCGGGGTCTCTAGCGGGGAGCATTCTTCCCCGCGGCCCGTCTGCGCCGT
CCGCCGAGCTACACATCCCCCGGGAGGGCTGGGTCTTGATTCGGGTGCGCGGCCTCTTCC
CCCGCCGAGTTCTTGGCGTATCTCCTTTGGAATCTTAAAGTTCTTCTGGTTTCTGCTTCA
TAGGGTAGGTTTTGGTTTAGGTTTCGTTTATTACTTGCTGAGGCCAAACCGACTCAACCT
ACTTGTTGTCTTGTGTGTTGCGGCACATGCATTTTGCATGTTTTATCCTGTATATATCAT
CACTGCAAAGTGTACTTCTATCTTGTTTATTATGGCGCTAGATCTTGGCTGAGGGTTTCA
GTATTTTTATGAAATACACTTGTCAGTAATAAGGAGGCCTAAAGAAGTTGGATATCGACG
TCTCCGGGTCTTATAAACAAACAACTTTAATCTGTTCCACTTATGGGTGGACTGCATTCC
TAGCGAAGTGATTGTTCAAGAACATCAAACTTTATATCTGTGGGCTGCAGTGCAAATCTC
TCAGATTTGTTTTACCCGGCCTGCAGATTCTGCCTGGTGTGGTCAAAATCCACTAAACGA
AGATGGTTCCGCAATAATTTCCGTCGAATTGACAACGTGGTTACCTAGTTCTAGTTGACG
ACATTCTTTCTTCACAGGATGCCAGATGTATGAACCAAAGCCATTTTTGAGCACTGGGTC
AGCTCACGGCACTCCGGTTTCTCACGATCAACAAATCGGACCAACTGCCAACAATGCAGT
ATCTAATATTGGTGGAAATAGCTCAAACGACAGCTTTGCCACCAGACAGCGTTTACGGTG
GACAGATGAGCTTCATGGACGTTTTGTTGAGGCTGTAGCACAGCTTGGTGGACCCGACAG
TAAGTTTTTTTTTTCCGATGAAAGGGCCACATAGCCCCATTTTCATTGTGAAATTGAAGT
CATACATCATATTGTGTTCTATTACAACCTCATGATGCATCAACATGTTATAGCTGCGTA
GCTTGTTGGATTGTCATTAGCTTATTTCTTCCTTCCTACTTCCCTTCACCTTAACCTGCA
ACTGACATATATGCTCCCTGTTTAATATGTTTACCCCTTGGGTGCATTTTTGCCGACTCT
TGGCACAGGTTTATTCTAGTTAGTTAATGAGCAGCCAAACATGATATGTTGATATCCAAA
TATTTTATGACGCATACATTTAGGCACTGATGCAGTTGTTCTTTCAGGGGCTACTCCTAA
GGGAATTCTTAGAACAATGGGTGTTCAAGGGTTGACCATTTATCATGTTAAAAGTCATCT
GCAGGTAACTACTTAGGACTTTGGCATAATATTCTTATGAACTTACCCCTGAATTTACTG
ATTGAGTTGTCTGTTTCTTCAGAAATATCGGCTTGCAAAATACATCCCAGACACCACAGC
TAGCGGTGGGTAATTGTACAACAAAAGGTCTTTATTTAGCACGCGAGAGTTCAAATGCAC
TGTGATTCAATTTTTGTATTGTAGGCGACAAGCCGGAGAAGAAAGATTTAGGAAGTCTGC
TTGAAGGAATCGAAAGCTCTCCGTAAGTTTACTTTTCGCATGTAGAGTAATTCGCAAAAG
GCTGATATAGTGGCATTCTAAAATGTAAACTTCCATTTGATACCGCTTAACAGTATACTG
TCAAACTATCGACTGTGGAACTTTCTGGTAGATTGGTAGCCAACTTTTTTCTGAAACTTG
AAGACTGGTAGTCAACTTGAAGGTTCTTCTGTTTCCTGAATCTTGATAAAGCATACCTTT
CAACAGCAGGGGAACGGAGACAAGCCAGGTTCTAAAATTGCAGGTGGAGGTGCAGAAGCG
TCTACGTGAACAATTAGAGGTATACATCATGGGCTCCGAATCTGTGACAAAGATTCATAT
GCTGGCACTGGCTGGTAGTAAAACAATAGTACAATACCATACTGATATTAAGGTTTTTCA
CGCATGCTGAACATTTGTACCTTTATCGTTGTACTGCCAAAATGTCTTACATTTAGGAAC
AGAGGTAGTGTATTATTGGAGGTAGTACTGTTTTCTGCATTGAATCTGGTTAATTTATCA
TATTAAGCCCATTGACATGCATCCTTTAGCATGTGATTGCCAAGTATTTACAGCAGCACA
TTCTTCTTACTGTACGTTACCCCAAAACATAAAAAGACTCGCTCAATGGTGTACTCCCTC
CGTTTCTTTTTACTCCGCGTATAAGATTTGGTCAAAGTCAAACAACATAAAGTTTAACCA
AATTTATATCAAAAAATATGAATATCTACTATATTAAAATTATATAGTATGAAAATACAT
ATCGTGGTGCATCTAATAATATTGATTTCATGTNNTGAATGTTGATATTTTTTAATATAA
AGTTAGTCAAACTTTACAAAGCTTGACTTTGACCAAACCTTATATGCAGACTAAAAAAAA
CGGAGGGAGTATAATAGTATCATATACATGA