Contig Data
morexGenes
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Map Locations of contig_157274 (4915 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_157274

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16204 1 247 bp MLOC_16204.1 Available Available None
MLOC_16203 1 560 bp AK363054 Available Available None
MLOC_16205 4 1310 bp AK361216 Available Available None





CDS Structure of MLOC_16204






CDS Structure of MLOC_16203






CDS Structure of MLOC_16205






Contig Sequence (4915 bp)

>contig_157274 4915 assembly3_WGSMorex_rbca.fasta
GCGTCCTCAAGATCGTCTGGGACTACGTCAAGGCCAACTCCCTCCAGGTAGTGCCCGCCC
GTCGACGGAGCCCTAGCTGTCCGTTGATCCCATTTCTGCGGTCTCGCCTGTATTGCGGCA
TGTTAATCGTTCGAATGTTGGATAAGGGTGGGGGTTTCAAAGAAGCGAACCCCGTTTTGG
TCGATTTGGCTGTAGATTCGTTTGTGTTGCCAGCGATTAGCGACTGTATTGCCTGAGTTG
ATGTTGGGCTGGGGCTGGGGCTGGTGGTGGGGTGAAACGCCAATGCTGGCTTTGGGTGTA
GTTTTCTTTCAGCTGTTCATCAGGGATCTGCTGCTGTATTTTAGCAGTAACCGGTACATG
AAATTTGACAAAAAGTTTCATCCAAATTAGAGTTGTGCTCAACCCTGATAAATTTTGTGG
ATTCTGCTTAAGATAAAGCACCTTTCATTTGTTTGTGTTGCAAGATTATGTTAGAGGGAA
ACCCCTCCATGGTGTAGTTCATTCCTCATTCCCCTGTCTTAGGTAGGTAGTGTATTAATC
TCACTGGGTAGACTGCCTTACTAGCATTTTAATTTTGCGCTGAGGTTGTTGTGCTGTACA
TCTAGTATTAATGAGCAGGCCAATTGCTGTTCAAAATTTCATGTTCGGTCGCAGTTCGTT
GCTTTGGTGTCTATCGAGCACATCATCAACAATACTTGCTAAACACTGCTGTTAGGTCCT
AATCTTTCTGTTCACTATGTTCCTCTGTGTTGAGGCAAGAATTTCTGTGTGTTTGGAAGA
ATTTATGTTGTTTGATACTTTCATAAAACATCTGTATTGTTGATTGCACCTTTTTAATTC
GCATGGTTATACCTATATCATCTGGTTTGCTGTATCAAAAATAGTTAATAGTTTCAAACT
TTCAATTGAAGTCCACTCTGCACTTGCAAATTTATGAACCATATATATTAGATATGTTCT
TTTCACTGCCTTCAACAGAGTTATAGTGATGTTGCATAATCTATTGGCTAATTAGATAAC
AATTGCAGTTGACCACTTTACTGGCTTGCCATCTGTTTGGAGGAAGTTATGTAATTGACC
GTTGTTTGATGAATGTCTGGTTTCTTGATTGTGCCTTTCTAGTTGCATCGTTGAACATGT
ATGACATCGTTCCTGTATGAGAAACAATTAATAGTTTCCATTGAAGTCTACTCTGCAGGC
TGCACTAGCAACTTGCAAAGTCATAAACATAAAGTTGAAATTCAGTGTTAGATATGCTAT
TTTGACTGCTTTTACTAGGTAGCTCAATTATACTGATGTTGCATAATCTATTGGCCGATT
AAGTAAAGAAATCGCAATTGACTGCGTTACTTGCCTCTACATGATTTGCAGAACCCAGCG
AACAAGAAGGAGATCATCTGCGACGAGAAGCTCAAAACCATCTTTGATGGGAGGAACACG
GTTCATATGACGGAGGTCACCAAGCTGTTGTCCCCTCATTTCGTGAAGTCTACCTAACTA
AAGCAGCCGAATGGGGGGTTGGCGCTGGTGCTTTCTGCCCAGAGCCAGCGCTGGAAAAGC
TTATTTTGCGACCCCTGTCAAGTCAATGTTCTACTAGGTAGTTAAGTAGTCATGGCTTCA
GACTTTGTTTGCCATTTAAGGTTTGGGGCTCGGTGATGATGCATGTAAGAAGGATTCCCT
GTGTTTTGTGGTTTGTAGCTCCTGCCATCATGAGAGGGCACCCACATACACATGCATGTT
GATGTGGTTTCAGTGTGTTTAGTCTGTTAATTCCACTTTGTCCTAGTCATATATATCATG
CTGGTCTCTTGGTTGCAGTGGATGGTGAATTTGTGATAATAAGCAGGTTGTGGTCAAATG
TCGTGTCAGTGGCGTTCCTAAGAGTTCTGCTTGGTTTCCTGTAAGCATCATGGATGGTTA
CCTGCACGCATATTATACATTGTTTGTGCTTGCCTATTATTATGTCTTGGCTGGAGCAAT
AGTCCAGCTAACCTCTGATTGTTTTCCTGCTGCAAGAAACATGATGGAAAATCTCTTTGA
AAAGATGTTTGTAGCTCGCATTGTATATGCAATTTCATACATACTGAATGGGCCTGAACA
TTGCGCAATGTTATACTACAGTGTAACAATTTGTCAAAAGGGAAAGGAAAACACCGGCCT
AAGCTGTGTACAGACACAGACTGCATCTTTTTCTTCTTTTTTGAGAATCATGGTTACACG
ATACAAGGAGCGCCGAGGCCTGAGACATCTAGACGCACTCTGGAACAGTATGAGAAGAGA
GTACAGCTGCATCTTCTGTACATGATTACTGTATATATGATGTTATGCTGTGCTGTTCAC
TAGTGAAAAGGGGCATGGCAGTACACCATTTTGTTGACAAACTTTTGGAGTTGGTAAAGC
TTCTGTGGAATCAACTAAGGAGATGGTGCACCCATTGCTCTAGGATCGCTGGTGAGCCAT
ACCAGGGCCTCTCTTCATCATCAGAACCTACAGGAGAATGGTACACGCCGTCGAAGCTTA
TATTCAGTGCGCCCTCCAGATGCGCTGACACTTCGGGGACGACCCCATCTCCCCAGACGT
CGGCGCGGCCGCAAACCTAGTATGGGATTTAGGGTATTGTTCAGTAGTTTCTGTTTGGAA
AATAAATGTGGAATATTCCACAGCATGGCATTGCTTGGGGGTGTCACTCACCTGTTTGTA
GCCTTGTCCGACGAAACGGGCCCGGAAGGTGGGGCCTGTCGGAGCGGTTTTGTTATCGGC
ACTGACCATGACTGCTTCAGCTACTTCTGACGGGGCATCCACGGCGACAAGCTCATCTGT
GGTAGCAGCAAGGGAGCTTCCAGTTAAAGGAGCACCCTGAATATACCTGTCAAGAAGGAA
GACTATAAAATTGGCGTTCATTCATCCATATAGCAGAAATTGTTCCATCAAGAATTCAAA
ATAAGAGAATGTTAGTTACTTTAGCTAATCCAGGATGATAACCAGTCTGGCAAGAGCAAC
ATCAACGGTAATAAATATTTTCAACGCCAAGAAAATAAGTCGCTAAATATTTGATGTTGT
GACCCTTTGACCTTTATGTTCAAAAACTTGTATAATCATCACATCCACAATGAAATGGTT
TCAGCCTTCTTGGTTAAGAAGATGAAATGTAATGCATAAGCCTCAATTCTATGATATGAT
TAACATATAGTCAATTATTCAGAACCTGAACTATAACGTTAAGGTACCTTCCAGCAATGC
ATACATATCGTAGTTCTGGTGTGTAAACTGCAGGGGCACAATTCTTCTCGACGTAGTTCA
GTAGTCCTCTAGTTTGGTCAATTACGCCAGAAACACCTTTGGGAGGTGGCCTAGGAATTA
GAGAGAAAAAAGAAAAGCAATTCAGATACAAGAAAAGCATGCTCCGGATTCAATTTTGAC
AGTACATTGTTCTCAAAATTCCACCTGCTATCAAGTTAAAATAGTAAAGCTTGCATGAAT
AAACATGTACATTACTTTTATGTAGCAATCCACATGTCAAAATATATAGCAATAGTTGGG
AGATTTTTACATGTAAGGGCTTGTTTGGATGGCAGCGTATTAAGCTAAATCCCTTCAGTG
GATAGAAAATTTAAGTAAAATATTTGCACATTCAAAGGAAACAGGATAATATTTATCACC
TTCCCAAACAGTGCCTAATCATATCCTGTAAACACAAAACTACTGAAGTCCATATACAAG
TCTGGATCATATTGTGAAGGTAACAGGTATATTTGCACTGTTGTAAGCTGGGACAACATA
AACTTGCATGTTCTAGGAGAAAAAAACAGAAGGGGGGTGTAACAATAGGCGCCAAATCTA
ATTTCCCCCATTCCATAATTCATGTCTGTGATGTAAGAGGCCCATATATTTCTGCAAGAA
CTTGTCAAACTAAGGAATACAAGCCACTAAGCTTGCGTTACTCCCAAGTGCGAGTTAGAA
CAAAAAATAAGGTATTACTGGACCATATATTCATGATTTGAAACAATGACCAAATAAAAA
ACCGTACAGGTGGGGAGTGCCAAGCGTGAGCAGTAAACTTATGTCAGAAGTCCCGAATTC
CTCCATGTACACGCGCGCGAGCCAGCCCCCAGCTGAATGCCCTATCAACGACAGCTTCCC
GTCTGCAAGCATCAAACAGTTCAGAGTCAAGACGAATGCCCTCACTTTTAGAACATCGAT
CATTTTATTCCATGGTTTTCTGCCTGCAATATTATGGACAACTGAGAATACATCCCAGAA
TCTTCAGATGGCTGAAACTAGCAGGAACAGAAGGAAATCGAAGTTTAGATGGTGAATTTG
AAGCAACAATTTCCTTGTCATGGTAGCTGAAACCAAGTCAAGTCCAAACTGTTCGACGGC
ACAGAAGTAGTAAAACTGCTAGAGCTTCATTCGCAGGGCACTGATGACTGGCAGAAATTG
CACCATGATTTGATGGACGAACCTGGAGAGCCTAGCTCCCTGGCCTCGGACACCGCCTCC
TCCACTCGGTTCAGGTACCTGCGGTGAGTGCAGGCAAGGTGTTCGGTGAAACCCGACGGC
ACAAAATCAATCGCGTACGCATGCGGATGGTATGGTAGGATTGCTGCGTTTTACCAGTCG
AGGACGGGGCGCGGGCGGAGGGTGCCCCGCCAGTAGCTGGGGTCGGCGAGGCCGGCGGCG
TTGCGGAGCCAGTCGGGGCGCGACACCCGCGCGACGACGGACGGCACGCCGTGGCCGTCC
CGCTGCGCCGCGGCCAGCCGCGCGTAGTCGCCCGTGTTGTTCCCGAGCCCCTGCGCGCCA
CTACGACAGACCGCCGCGCGTCACACACGCGCGCACAGACAACCGGAAAGACAAAAAGGA
GCCGGGGCAGTGATTAACTGGGAGGATGAAGGCAGGGCGGAGCGCAGCGGCGCGG