| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_1572730
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_16202 |
2 |
958 bp |
MLOC_16202.1 |
Available |
Available |
LOC_Os06g03790.1, FRAME:-1, EVALUE:3e-78, 13106.m00321 protein 39S ribosomal protein L47, mitochondrial precursor, putative, expressed |
CDS Structure of MLOC_16202
Contig Sequence (7574 bp)
>contig_1572730 7574 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGAGATAGTTATCAGCAACTTTGTTAGAAGGTTCCTGACCTCAT
TTAGCAAGATATGGAATGAATGGACACACTGTCAAGAGAGATAGACAAGATTTTTTTATT
AATTAATCAATATAGTCACAAGAGGGCAGCGGCCTTGAGTGAGACTTGCCGAGAGAAAAG
CAAGGCATCCAATGGACACATAGAGCAATCAATGATGATACCTTTCTCAAATTTCATTAC
GAAAAGGGACTTGTTTGGTGGCCAAGCAGTTGGGTAGGCGTTAAGCAAACAAAGTGCTTG
TATGCCACCATCTTATTCATAACATATATATAATACATACTATTAGTTGGAAAACCAAAT
GAGATATATATATATATATACAGTAGTTGAAAACCCAAATATTATTAAAAAAAACACTCA
AGAGCAAATAGAAAATAAGATAAAATGCGTCGTCCATGATCTGTGAGCCTCATACACTTG
AACAGCTGCACTATCATTAGATTCATTAGAAGATAAGGTGGAGCATACTACTGTTCTCAC
TTCTGAAGAATGTACTACAAAATCATTTCCTACAGCCCTCTGTACACGTACGACTTGCAG
ACTTTGAAAAGAGGAAGCATATCAGCATGAATTTCATGTCGTATCACATAATGTCCTACC
TACCTACCGGCGTTATTTCATTGACCAAACAGTGGAGACTGGTGCGTGTCACGTATAGTT
ATGAAGCGTACAAATTCAAGGGCATGTTTCAAAATGATAAATTTGCAGAGGGCAGGGTCG
CAAAGTAGTAGCACACCACTGAACGGGTCATCATCTAATCTTCAGGGCAGAAATGGCTAA
TTAGTGATCAGAAGAATTAAGAAAGTGCTGATTATTTATTTTTAATGTCAGGAATAAAGA
GCGGCAACTTGTGTCAGCACTCGTGAGTGTTTTTGATCCGTTGTGGAGTAGTCCAAGGGA
AGAGTATCTTGCTCGTGGGAATCTCTCTGGAGGTGGTGGATTCTTGCAAGGAAAGAGAAT
CTCCAGTTGCTTCGTCCACGCCAACCTTTGCTCACCAATCACCCGGTTGCATTTCCGTGT
CAACTTGACCTTCTACGCGGATAGGGTTTAATAGAAGACAGTTTTTTTCAAAACTAATTG
CGATCCCTTGTCTTATAATAACTCCCCGGGTATCTTTGATTCGGAGAATTTTTTAATATG
AATTTCAACGATTGCTTCAGTATATCTTTGATTCGAAGGATTTGTGGAAACCACCACAAG
AATTATGGGACGGAGGGAGAGCATACGAATATTTATGAAGGTTCTCTTGCACTTTATTTT
AAATTTCAACAATGGATGCTTTCTTTATGAATTCATAATAAATCATCAAAGGGATATACA
AACACAATAACTATAAACCGGGCCTCCGCACACTTATACACACCTTCAACGTCACACAAC
ACACACACACACACACACACACACCGCGGTGGGAGAAAAGACACACCACCAAAAACACAA
CCTAAAAAAGATTCGACAATCCCAGGCTTTCGTCCGTAAGTGCTAAACCATTGCACCCCG
AGACAATACACCACGAGTTGTCATTGTACTGGCAAGGCCGTGATAATCCTCAGCAAATTG
CCACACACCATGTTCATGATACGACATTGCAACGTAGGATCGCCGCTACCATGCTTGGTC
TCAATGCCTCAGCTACCCCAAAAAGGGCACTGATAAGACATGGAGCGGCATGTGCAGCAC
GAACATGTTATCATCCACTAGCCCCTCCCCGTCCCGTCCCCCCGCTAACCAATGCAACTC
CAAAATGATGCTCCCAAGAGAGATAAACGACACCATTGACATCAACTACCAATCGGAGTC
ATCCTGACCTAGGTTTCCCTTGGAGCAACACGTAGGTACGCGAAAACAACATCTATTGGT
GCCAAAAGGAGTCACCATCGCCATCCTCAGAAATATCCGAGCACAACTATCGACCATGAT
CTCGTCGCAGCCGGACAAAATCCGTCCTGCGCCATGCCGACTGAGATGGAACCACGCCAT
CGTCGTGTCCGCCCGCAGTCCTGCTAGGTTATAGATCACACCAGTGTGCTACCATCCACC
GCTGAGAAGCCTTAGACACGTCTGCACGCCTAGCTAGCCAGGCCAGAACTACGGCCCACC
TCCGACGTCGCACATCTGCGGTACTATGTCGCTCTTGTCATCCGCATGGGCCCAGCGCCA
CCTCGACGAGTCACGGACCTTCACTTAAATGAGCCACCCCTAGGCCGCTCGTGTTCCTAG
CCAGATGTTGATAAGGAACCATGTTGATGTCGACGTTGTGTGGTCTTTACTCTCCATCGG
CGGTGAGGGGCAAAGGAAGTGGGGTGGTGCTTGGCATTAACAAAAATAGTGTGCATGAAA
TTATTCTTGTAATACAGTGGCAAACAAAATACTACCTCCGTCCTGGTTTAGTGGTTATCT
TTGTATTTTGTCCCAAACTTTGATTTCAGATTTAACTGGCAAAATGTCCTGTGCGCTGCA
GCAAAAGAAAAAACAATTTATAATCTTGAATGGTCATGATCACATTTGGTTGCATCATCG
AGAAACACCATCACTCTCATTTTCAAATTGTGAATAATTTTTTAAATCATGAACATTTAT
TAAACTCGGGAATATATTTGGAATTATGAATAATTTTCAAATGCGTTATATATACATTTA
TATATAAAGTATGGTTCCCAAGTGACGAATAGTATTAATATACGTTTATATATAAACTAT
GGTTCACTTACAATTTTTTCATAGAACTCACTTTAGAGTATCTTAGATACATTATATGAA
CATACTAAAAATAATAAATTAGTATATATACTGTCATATGGTAGTATATGAGGCATGGAT
GTAACTGCACCCCTGATAGTAGGATACATATATAAACACACTATTATTTGGAAACCAAAT
GATATATATACTATAAAAAATAAAATAAAATAAGTTAAATTAAAATAAAATGAATCATCC
GTCATAAAATATAGCATCCCTTGACTCCACGAGGGGATTTCCAATGTTGACCCATAAATA
TGCTCCGACATCTGTTTATGGACAGGGGAACCAATCCGCAGACACGGGCCGCCCATCCAA
CGCTACACGCATACATCTGACCTCAATTTTTTTATTTTTTGCACGTTCAAATAGCTGCAT
ATATAATCTAAAATAGTTCAAATGTCCAAATACAGCGGTAGTTCTAAATTTTTTTTAAAA
TATTACAATCCAACATTGTTGTCCCCCTTCACCGCCCGCATACGCTCAATCGGATTTTCA
TTCTGTTACTCGTGAGTTGCTTGATCCCGATTTTGTTATGCATTCGAACAATCTCTTCAA
ATATGGTCGGATTTTGATTGGAGAGTTTGATTTGACCACTCATGTCCTCAAATTTAAGAC
CTGCGGCATCATCCTCACCCTCATCCTCCACGACCATCTTGCACATGATCACACAACAGT
TCATTACCTCACACGTAGATCATTCCACCTTTATCTATCTAGGTTATCCTTCTTTCATAA
CAAAGCAGAATGTGATGATCAATCCCTCTATTATGAGATTCATGTTTATACCGATGTCAT
TGTATTGGTTGGTGCCATTTCTTCTCTTGGAGGCAGGTGTCGATATATTGGGACATGGCA
TCATCGTATTCATGTTTTCCATACTGCACCATATTTCCGTAGAACCTCGGCATGATGCAT
TGTTGCAAAAAAAAAAAAGGTGGAGAGTCATTGCTGAAGTTTTTCAGTTTATTTCCCCTA
CTAATATATCTGAATTATGTGATCTATGGAACAGAAATGACAAAAGTCTGCTATTGGTAT
GGCATGCATTGCATCCATCTAGAGCTTATGGAGATCGCCAAATGATTTGTGTTTTCAAGG
AAAAGAGTGAATTTGATCAACATGGCTTCTATCTGAGGTACCATTCCAGCTGATGTTGAT
GCTTATGTAATACAGTAGTTAGCTCCTGTCTGAATTTCCTTATGCTCATGATGTTGGTTG
ATCAGAGAGCTTACTAGCGCAGCTACTTCGGTTTAGCCCCAGAATTGTGAATAGTCATTA
TGTGTTATTATTATTTTTTGCCTCGTTTTAGGGCATCCCACAGTACAAGGTAGTATTAAT
AATATTCCACAAAAAACTCACACCTACTGTGCATGGTGTACTAATCCTTGCGACGGCATC
GCAGGACACAAGGACGCCTATCCTGTCCTGCATTGACATGATAAAAGAACATCGACTAAA
TGAATTCCTGCATTGACATGATAGAAGAACATTGACTAAATGAATGGATGAACGACACCA
AATGGAGCCGCTCTCACCCTCAAGGCCGCCTGAAGACTAAGCTCTGGCTACGCAGAGCCA
GAAATGAAACCAGTGGACATGCATATCACATTGTGCAAACACACAGCTGCGGGTGGTAGT
CATGATTATTCGAACACAAGTCCGTTGACGTTCATCCGTGGAGCTGTCGGGGGGCGGATG
GCGTTACACGGGTGACTCAAGGATTGCCGGTCTTATGCATCTTACAGGGGCAGGCATAAA
ACACAAGAAGGGAACCAAGCAAATTCTTTCTTTTCAGTAAATAGATGCTAATGCTGCTAC
GGCTGCTGCTTACGGACAGTTGAAGCGCGGCGTGGCGTGGGTCGATCACATGGCGTTGAT
CATCCGCTTCATCTCCGCGGTCCTCCTCGGGTCAGGGTCCGCTATGGCCCGCTCCGTCAG
CACGTGCTTGATCCGGCACATCGATCTCTTCACCTGGAAGAAACAAACAATAGCAGGGCG
AGTCAAGTGCCGCCTAAGGAACAGAGAAGATGAATTGGCAAAGAAAAAAAAACTGATGCT
TCACACTAGTAACAAGCTTTTCAATTCACGTTGACGCTTAGCATGAACCAAACAGAGGAC
ATGGTATCCTATAATAAAGCAGTTCATATCTCTAGATTGAAAAGTTCACCAACAATATAT
TGTTGACCAACTGTTCACTCATTATTTCCTGGAGAGCAAGTACCCAGCACTAAACTGTGT
CTTGAACAGAGAACGCGCCTTGGAAAAAAATACGCTGATGAAAAGAAATATTGAGTCACG
TAGACACTTGAGAAGAACCAAATGGAAGGAATGATGTCCTATAAAGCAGGGCATATCTCC
AGATTGAAAAGTTCATCAACAACATATTGTTGACTAACTATTCATTCATTATTTCTTGAA
AAGCAAAAGTACCCAGGGCTGAAAAAAAAACAGCATTGAAAAGTGGCCAAATTTGCACCA
ATGTTGAACACCACCAATAAATTATCATTTTAGAAAACAAAACAAAAAAAGTTACTGTCC
CCAAGACAGACATGGTTTCATAAATTTCTCTCTAACTGTGCATAAAGAAACTGTTTTCCA
GCATGTCCATGCTGCATAACATGCGAAAGCAGGAGAATTAGTAGTGTGTTGTTTGTCGAA
AAGGAACGCGTTCTGGGGTTCAGTTTATTAAGAAGGCCATCGTTTCTGAGCACCATTGCA
TACTCCACAATATCTCTGACCACACAGTTTGCCTGTCCGAACCAAGGATATTCAAGGACA
GTAAGCTTTAATGAATATTCATGAAGACAGCGGCTTATTTTGGTCACTTCCATGCAGTAC
CTTCACAGGAGCAGTAGAATACCCGATGTCACCTCTGATTTTGAATCCATCATGAAACTA
GAGCTACCGAATTGCAGTTGTATTAGGTAGCAAAAAAAGAAAAAGAAGACACAAGTATCA
TAAATATATGATTGGGTAGAGATGGCAGGGGTTCAGAGATGCAACATTTTTGACTTGTAC
TGGGCATAGCTTGGCATCCACAGGTGGAGTGAGCAAACATGTTACAATAAGCAGGATGCA
ATTATTGGATGAAATCAAGATCTGTTGCACGTGGAACCAAAACATGCAGTTAATTGCTCG
AGGAACGGCGTCAGGTTGTGGCGCCTAGTGGATATACCTTGGAAATGCGCTCCGGGTTTG
GGAAACCCATACTCTCTGAAGCTAGCATCTGGCGCTGGGACATGAGCATGTTCTTCTCCT
TTAGCAGCACATACCATAGCTTATGAAGGTCGTCCCAGGATTTCAGGCGCAGTTCAGAGG
CCTTCCAGCCACGACCTATCAATATCAATTAAGGGCAAGCAAAAGGCAACAACACTCATT
AGCTTTCCTGACAAGAATGATGTGTAACTACATTTGCTCGTACCGTTCGTAGCAAAAGCA
GGCTTGAGACATGGGAAATGTAAGATCCTACCTACTGCTACGACCTACGGCGTGACCTTA
CGCACCACCGTGACAAAATTCAGGATCATCGCAAAGTACCGGAGAGTAAGTATATGGAAG
CAATAACATAGTAGTACTGGCATGAGATTGGTGGCGTCGCATGATCCATGAACCGGATGT
GTCACGACGGCCTATCCGTCGAAAATCCGCCAACACCCTCGTAGAGTACATGGGATGGGA
TGGGATGGGATGGGATGGGAGCGGGGAGTGATGTTGGTACCGTAGTGGGGCGCGGGCTGG
TCGTCCGCGGTGCTCCGCTCGACCTCGAAGAACTCCTCGAGCGGGTTCTGCGCCTTCCTC
GCCACCGACGTCGATGCGGCGGCGGAGGCGCCCTCGGGCGCGGTGGAGAAGAGCCGCCTC
GCGAGCGTCCTCGACAGGGAAAGCATGGCGGACCTGAAGCGGGACGGGTCTCGTCGGGGG
AAGAGGAGATGCCGGCGGGCGGGGCGGCGGCGGCGGCTGGGACCGATCCACGGGAACGGA
AACAAGGGTTTAGACCCAAAACAAATGGGTTCTGGGCCGGATTTGGACCAGGATGGTAAC
GAGTCGGGCCGATTCAGGGCTTTTTTGTTTTTGCAAAGCAGCCCCGCGCTTTCAGTCGAA
TCATGCCAGCAGTACAACCTATCGAATTCACATCAAAAAGAAAAAAAAGTGGAATCATGC
CCGTAAGAATTTGTTTCGCTCCTGTGCCCAAGATGCCCTCTTTTTTTTTTGCGGGATAAA
GGAAGTTTATTAAGATGTCATAGTGTTACAGTCGAGAGGCCATAAACCATCAATACAAGG
TGGAACCGAACGCAACCACACAGCTGTAGTTCGCTCAAAACCCCATGAATAAGCAATGCT
ACACATACTAAAACTTAGGACCTGTTCGGCAGTCCACTAGCTTCTCCCAATTACAGAATC
TGCGGAGCGTCTGTTTGCTCACTCCAAAAAGTTTAACTGCAGCTCCGTCCGCTCCTGGAG
CGAGCCATGGAGCGGAGGGTTACCGAACGCGCCCTTACGTGATGATTTTACGTAATAGAT
GATGTGAAGGTAATTAATTAGGCTAGGATTAGTGGAACAACAATACTGCACCTAAACTAA
CGTAGCTGTTTAGGTGTCCTCTTTTAATTGGGTTAATTAGGAAAGGGCCCCACCCACTTG
AAATCTGGAGGGGGAGGAGAGATTATTTAAGAAAGTTAAGGCCCTGTTTGAAACCATCCA
GATTATATAATTCAGTTTTTATAATCTATTTTGTCTTCAAACAGGACAGCTTATGGTGTA
GATTATAAAAACTA
