Map Locations of contig_1572252 (3984 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1572252

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16056 1 1025 bp AK372113 Available Available None





CDS Structure of MLOC_16056






Contig Sequence (3984 bp)

>contig_1572252 3984 assembly3_WGSMorex_rbca.fasta
GAAAATTGATGGCTAGACATGATCCAGTTTTGGGAGGCAACCTTAACAGTAGGCCTTTTA
CTTGCATTTCTTTCATACTTCAGCTGATAGAAGTCGAGCCAATTCTGCATCTTCTTCTTC
TCTTTGACCAGGTTAGCGAGCTTATTTGCATTATAAACAACCTTGAAAGAGAAAGTGCAT
GTCATAAATAAATTAGAACATGACTGGTAATGCCGCCAATCCAAAGTACACAATCATGAT
TTGTATTTTTACATTAAGCAAATAAGTATACTTTATATGGAATTTGAGTACAGATAAATT
GTACACACACCAACCAAAATCTGACTGGCGTGATAGAAGGTTTATATGGAATTTGAGTAC
AGATAAATTGTACACACACCAACCAAAATCTGACTGGCGTGATAGAAGGTTTGAATTTCG
ACCAATGCATCCAATCAAGCAGAAGGTTGAGAAGAATGAAGTGGGCATATACACAATTTC
CATTGCAATATGACTATGCCTAGCCATGAAAAATGTAAATATTACCTGATGTGTTAGATA
GTGATCAGGATGATTCACAAGGAAGAAATGCTCTGCAAGCTCACCAATTGATTCATCCGG
ATCAGGTGGTATATTCCGCACCAGGACCTAAAAACCATCATGCATCAATTGTATGTCACA
AATCATAACTACAACGGCAAAATCCTATAGAAAATAATATTTTAAAAATTAAGAGCACCA
TGCGAAGGATCAGGCGCCTATGGCTTTTGGGTGCAGCCGTCAGGAGACAGAAGCACAGGA
TAAACTCGACCGGTTTGGCTGGCGTAACACTACTAGATTATGTGTACGGGTGATGTAATC
CTGTTAGCGACCGGTTGTGGTTGAGCCTTTTATTACTATTCTTGTGCTGGATGTTTATAC
ATTTCATTTAATAAAGATGATTGTGTGCATCACATGATACAGAGGATGGGGGGCGCCTCC
TTTTCAGTTTTTTTTATTGTATCTTGATTTCTTTATCAAAACTAAAAGCATAAATAAGAA
GAAAAAAAGATGAGTTCGCACACTACACAGTTCTGTATCTGGATACAACTATTCGCAAGA
GCTAGGCTGTCTCTGTTTTCCATACAATTGAAGATTGGCTTTAAGTCATATGTCGGATAA
ATATTGCACTTTATTTTCCTTCTTTGGAAACTTAACAGCATAATCAGCAAATGATTCTTT
ACAGAATGAGCTGGATATGCTCGGTAGTGTATTTGGTTGTCGTAATGCTGACTTGTAAAT
CCTTTCAATCACACTGAATTATGTAAGATTTGTTTTTAACTGGAAAAATGTCATATTCAA
GTTCACACTGACCGGCAAAAAGGGATTCCACCTGTCCCCTCAAATACGAATAAGTTGCCT
TAGGATCCAAACCATTACATATTTGAAGAGAATTAATATTGGCCTAGATTGATGTCACTA
GATTCATTGTGAAATGAAGTTCCATAATATGTAAATTCTGTCGTTTGTGATTTACTATTG
AGGGGGTGGCCTAGAGACCGTATCAACATTCAAAACAATATGTATAAGTGGAAGGAGTAT
TATAAAGAGAATCAAGATTGGACACATTAGATTGATGTCACTAGATTCATAGTGAAACGA
AGTTCCATAATATGTAAATTATGCCGTTTGTAATTTACCATCGAGAGGGTGGCCTAGAGA
CCATATCAACGTCCAAAACAATATTTATAAGTAGAAAAAATGTCAGGGAAAATAATCTAG
ATCCTGATCTACCAATTAGACACAGAAATAAAAAAGATTTACAGAGTAACAAGATCATAC
TGTGAACTGGTCTGGGCGGCGTTTCTCTGATGCAAGAAAGCGCAATCTCATCGTTGCGAC
TATTTCATACTCCCGCAACAGAACATAGCATGTCCAAAATGTGAAAACATAAGCCATAGT
CAAGTGAGCTATGAACCTGTGTTCAAAGGGTTACTCAATAAGCAATTCCAGAGTTGATGT
AAAGCTCTATGTGGTCCTATGCTGTCATGCCAATCTGCTGCCACATGGTGTACGCTGGCA
TTGTAGCTCAAATTAATATATGCCAATCTTTGGGCTCTACATTTCCAACGAACGCAATCA
CATTATTCTCTCCCAATTCAGTTGGACAGAGGATGGGAAGTTGGTCATATTCCAAACCCT
CTCTCCATCTCTCTATTCCAGTGTCTACTCTTTTTAGATAATGATCTCTATCTGTACTAG
CTCCCTCTCTATCTCTGCTACCTCTCTCTCCCTTTCCCTCTCCCCCAAATCTACTGGGGA
AGAACTGAGATAGGCTATCACTCCCCAGATCGATCATGTATATTTAGGGTAATCTGAACC
TACCCCATATCTATTATCTTCAAAGTTTGTGGTAATGTGGACTGCATGCTCAAACAGATT
AGCTTTGGGTAACCTCTCCCAGAGTTAACTTGTGGTGTTACCACATAAGCAATCTTAGAG
AACTACTATATGCAAATATATTTAAGAGAATAAACTCATCTAGTGCTAACCTCTTCGACC
CAAAAGGTATGTTGGATATCGAAAGTTTGTCGATATCACTGTGCTCTACCTTCAAGCCCT
CAAGGGTATCATTGGTCCAATTAACAGGAACGAGAACAAGAAATGCTAGAATTGTGATTG
GAACAAATATTTTAAGCCTGCAAAGGTTAAAATGTGTTTAGTATAAGTAATGATTCAAGC
AAAAAAACATGGAGCTGGACAACAATCAGTGGATAAAACAGAACAATTCATTGGTTCGGC
ATTTTTAATACTTATGCTGCACTTTGTATATTGAGAACAAGACAAAATAGAAAAGGTTTA
GAATCAATACAACAAAATAAACATTCTTGAGAAAACTGGAACCAAATAATAAGTAGGTAA
AAATAAAAATGAATGGTTAAACACAAAGATTAACTCACTGAAGCAAGTGAATATTTCAAC
ACTGGAAGCTAGATGTCTTATAGAGAAATAAAATACTACAGCAAATGCAAACCTAAAGGA
CAACTAGAAGAAACAGAATAAAACATATAAAAAATGCTAATACTGAACTGATCTCTAGCT
ATCAGCAACATTCACTGCACCAGATCATTGTGCAACGCAATCGATCAAGCATCCGTAAGA
AACACTGTTCAGTATACAATTATAACCAGCTATAGGCATGTTACAAAAGATGTGCAGTCA
AGCTGAAGCTAAGAACTTCACCAGTGACTAGGAGTTGCATCTTATCTGAGGTACAAGTAG
GCAGAGGAGATACAACATTAAATATGTCCACAATGAAACATAAGTTACATACCCTGTCAA
GTAGATCCGCAGATAGACAGCTGAATCAAGCCCTGCATGGCTAATCAACTCATCCTCTGG
CATTTGGAGAGCAGCAGGCATCCAACTTAAGAACTTTAAGTATGATCGCATGTCCAAATT
TACAAACTTCCGTACAAATGCACCCCCATGGCTTGGGCTTTGTCTTGTACCTTTCAGATA
CCACTTTGGGAAGTAAACCCTGTCATTGATGGGCTGTAGCCGTAGGAAAGCAAATGCTAG
CAGGAATATGACGGCACTCAGTATGTTGATAGCTGCAGAAACACCTATATCTTGGATCGT
AGCCATAGTTGTTGTTCATATAACTTCTGGGAATTCCTACAGATGTTACTGTAAGATGTA
AGGAAGAAAGCAAGCATATAATGTTGAGATAGTTTGATGTCATGAGAACAAACTTGTAAA
CTAAACCAAACCTAAGAACTGGTGAAGTGAAGAATGTCAAAAGGACAGACCCAGTGCATA
CAAGCTCCCACACACGGTGGGGTCGATAGAAATGAAACTTTATGAGATAAAAACCCTTAA
TATGACACAAGGTGGGGTCATGGTGGCGTCGATGGCGGAGGCACCTGCCAAGGTTGGTAC
CTCAATCTGCTCTGAAGATGAACCAGTGGAAGATGGTGACGGCGACACATGTGAGTGCGT
CAGACCGGTTTGTGCCCCTGACCC