Contig Data
morexGenes
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Map Locations of contig_1572196 (2897 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1572196

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16037 4 1841 bp MLOC_16037.3 Available Available LOC_Os01g50110.1, FRAME:-3, EVALUE:7e-88, 13101.m05216 protein MYB family transcription factor, putative, expressed
MLOC_16036 1 260 bp None Available Available None





CDS Structure of MLOC_16037






CDS Structure of MLOC_16036






Contig Sequence (2897 bp)

>contig_1572196 2897 assembly3_WGSMorex_rbca.fasta
GCGGCCGCCCTCGCGCGCCCCCCCCCTGCCCTCGGGGCAGGAGGCGGCGGGGGCAGCGGC
GCCACTAGCAACGACGCGAAGGCCATCTCTACCTCCCCACAGCCCCTCGCCGCGGCGCTC
CACCGGACAAAGGGGACGCTGAAAGCGGAGCAGATGCTCTACGTAAGCATTCTCTGAAGA
CGGAAACCCGTTGCTCTACGTCTACGCCCTTCGAAGGCGTGCTTCGAGATGCCTCAGAGT
CAGATAATACGTCTGCCTGTCTGGAAAAACGCGGATTTTGCAGCTACCGGTCAATCCCAC
GTACAATTTCATGCATACAATCCAACCTGACAGTCCATTTGGACGACGGCCGGTCGCAAC
GGTGGGTAAATTCGCAGACGCCGTTCTGTACTACTCCTATATAGCACCAGAGCCAGAGCT
CCACACGTGCAAGTGTCGATGCCTCTACTCTACGCTCCTCTAGCTAAGCTTGCTCAATCT
GTTTCCTCGGCAAGTAAGTAGTAACAGCCATGCAACTTGAAGCATTTTTTCCAGGAGCAG
ATCAGAGCTGCAATGCTACATGGTCGCATGGATGGCCTGCTGCTCAACTAAAAAGGTGCG
TGTATTCGTAGATTGATAGATTCTCTGTTCATGTTTGCATTGTCCGGCATGCGCGTGTTA
GACATGTGGTGGAAACCAGTGTTCCATTTGTGTATGTGCGCATCCTTTTCCCTTTGCTTG
CATCATACGTACGTGCTGATATACTCCCTCTGTTTCTAAATATAAGTCTTTTTACAGATT
TCACTAAGAGACTACATACGAAGCAAAANNNNNNNNNNNNNNNTCTAAAGTATGTCTATA
CACATCCATATGTTCTCTTTTAGTAAAACCTCTAAAAAGACTTNNNNTTAGGAACGGAGG
GAGTATATACGTATCATTATCCTGCGTACCCGCAATCTGGTGAACCCTGCCGAGGAGAAA
GATCCGGGGCAATACTTTCCTGAGTCCAGTCGACATCGGAATCAATTCGGACAGGGCGGC
GCGGCGCAGGTACGGCAAAATGCGATGGAGGCACGCGTACGTACGTTGCCACAAAACATG
AGCTGTACTGTACGCGTCTCGGCCTTATATAGACGGATGGACCTGCAGGTTTATGGGCTG
CACCTACTCAATTTTGGCCACTCGGTCGGCACTCGCCAGCAGGTTCACATGACATAACGT
ACGCCTGAGCAGCAGGTGAGCACACACACTGATTCATTAATTCGCACCTTCTACAAATGT
ATACCTTCTGTCTGTGCAATCCACACGTTACATCCTCGTACTAGTGGTTTTCATCACACA
CACACACAATCACAAATGTCACCAGATCGAACCGTGGAGCAACTCATGCGTACGTACCCT
GATCGTCGTTAACCTTTTATTCTGATCCACGATTACAGTGCATTCATAAATCTGTATCAG
CTAGCTAGCGCCGCCCTGATCGTTCATCACATCCTTGCGATCAGCGGCCAACTGGCGGTC
ATTCATCAAGGAATCGAGGAACGAGGTGAAGGTGTCGTCGTCCACCATTGGACACCCCAT
GACGTCCTCGAAGCCTCCGCGGGAAGCAGCGTAGTCGGCGAGAAGCTGGTCACCGAACCC
TTCGAAGCCATCGGTGTCCAGGCTCATCGTCGCGGCCAAGTCGTCGTTGCCTCCGTCGGC
TGGGCTGTCACATCCAGTTGCAGCGGCAGACGAGGTCGGCAGCACTGGCATGGGCGGAGG
TTGCGGCGGTACGACCGCCGGCGTTGCTGTCGTCTTGCCGGGAGCAGCTGCCGTCTTGCC
GGGGGCAGCGGCGAGCGGCATGTGCGTCCGCGGGTCGAGGCCCTGGGCGATGAGCTTCTT
GCTGAGGTGCGAGTTCCAGTAGTTCTTGATCTCGTTGTCGGTGCGCCCCGGCAGCCTCCC
GGCGATCAGCGACCACCTGCGTGCACCGCCACACGTCCATCAGCTCCACCATCTGCATGG
ACGCATTTCAGGGAGTAGGTTACGTGCACGCACCGGTTGCCGAGGACGCGGTGGAGGCGG
AGGATGAGGTCCTCCTCGTCCTCGGCGATGGGGCCGCGCTTGATGTCCGGCCTGAGGTAG
TTCATCCACCGCAGGCGGCAGCTCTTGCCGCAGCGCAGCAGGCCGGCCCGCCGCGGCAGG
GTGCGCCACCGCCCCTCCCCTTCCCGCGCCACGAACCGCGCCAGCACCTCGTCCTCCTCC
GCCGTCCACGGCCCCCGCTTGAGCGGCGGCGGCGCCGTCGTCGTCTGGGCCTGGCCGTCC
TCGCTCCGGGCTCCTCCGTGCTGCGCCGGCGGCTTCCGTCGTGCCATCGATCGGCCTCGG
CTCCGTGCCACTGGAGAGATTCGGAGGATGGAATGGCTTTGGATTTTGGCTGCTCGATCG
CCTGGCTTCTGCTTTTCCCGGACGCTTTTTCTGAGAGGGGTTTGGTCGCTTTTCTCGCCG
TGCGCCGCAGCGCCACCTCCCGGAGAGGCAACGGTCGGTGGGGTGGTTTGTTTCTTGTGC
GCGGCAGTCTGTTCCGTATCCGGAAAACGGAGGAATTTCGTGATGGATTGGCAGGGCCGC
GCCGTGTCACGCGCACGCTCTACCCGATCGGGGTGAAAACCGAAGGATGCGGAGAGTGGT
GCCGGCCACCTCCAAATTAGAACGTGCCGCCACTATACATCGCTGCACTGGATAGTTCGC
TTCAGTTTTTCTCCTACTTTATCAGGGTATTTTATACACTTCCTCTTCCGTTCCAGAATA
CTTTGTTCTAAAAATAAATACTAAAATGAACGTATTTATCTATATCTTTATCTTTATCTA
ATAATAAAGAGGCTATCGCTTCCGTCGGAAAACCCATCGAGGTGATTTTACAAAAAAAAC
CCTTACTGTTTATGACA