| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1572096
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_16007 |
1 |
1382 bp |
MLOC_16007.1 |
Available |
Available |
LOC_Os09g08190.1, FRAME:-2, EVALUE:9e-127, 13109.m00677 protein sulfotransferase domain containing protein, expressed |
| MLOC_1607 |
7 |
5024 bp |
MLOC_1607.2 |
Available |
Available |
LOC_Os03g10780.1, FRAME:+3, EVALUE:0.0, 13103.m01209 protein flap endonuclease, putative, expressed |
| MLOC_16097 |
2 |
2696 bp |
MLOC_16097.2 |
Available |
Available |
LOC_Os05g41440.1, FRAME:-3, EVALUE:0.0, 13105.m04396 protein cytochrome P450, putative, expressed |
| MLOC_16006 |
1 |
1760 bp |
MLOC_16006.1 |
Available |
Available |
LOC_Os07g41460.1, FRAME:+1, EVALUE:1e-124, 13107.m04314 protein sulfotransferase domain containing protein, expressed |
CDS Structure of MLOC_16007
CDS Structure of MLOC_1607
CDS Structure of MLOC_16097
CDS Structure of MLOC_16006
Contig Sequence (6764 bp)
>contig_1572096 6764 assembly3_WGSMorex_rbca.fasta
ATATCACCGCTGATATGGACATATCACCGCTGATAAGGACAGATCACCGATGAGTGCGAT
CCACAAACACGCAGTGAATTGAATATGCTGGAAAGTGAGAGCTGACACAGAGATGTTGAT
ATGGACATATCACCGCTGATATGGACATATCAGCGATGAGTGCGATCCATTTGGATATAC
ATATGTGGGCTGCAGGTGTATCATGCCGTCTTCCCTATTTTCTACTAAGTGTTTATCAAG
TGGGCTTCAGCTGAAGTTCCAATACTGGACGTGCGTTTCTATATGTGCCCTATTTTCTTC
TGTGATCTCTCTCAGAGTCAGACGCCAGCATTCCACCGCCGCTCTCCTCTTCTTCCATCC
AAGGAATCATCTTTACCATACGGTAGATATTTTTTGTGGCGCATAGTAGATAAGTAGAAG
AGCATGCCGACCTTGTCTTCCATGGCGACTCCAGAACAAGGGCCGGTTCCTTTCGTGGAC
ACCCTGCTTGCCGGCACAAACCTCGTGCCCTCGCCGCGGCAGCAGCGGGAGGAAGAGCAT
GCCGACCTCGTCGCCACCCTGCCGAGCGCACTGGAGGCCAACGGTCTAAAGAAGCTATGT
CTTTACCAGGGCTTCTGGATACGTGATATCCACGTACCGGCGGCCATCGCCCTCCAGCGG
CGATTCGAGCCCCGCCCCGACGACGTCATTGTGGCCAGCTTTCCCAAGTCCGGCACCACG
TGGCTCAACGCCTTGACCTTCGCGACGATGGCGCGCAGGGCATACCCTCCCGCCGGCGCC
GACCACCCGCTCCGCCGCCTGAACCCGCACCAGTGCCTCCCTTTCCTGGAGGGCCTCTTC
CAGGGCGGCCGGGAGGCGGAGCTCGAGGCGCTCCCATCCCCGCGCCTCATGAACACGCAC
ATGCCGCTCCCAATAATGGTGCCGTCGGCCGTGCCAGGCTGCCGGGTCGTCTACGTCTGC
AGGGACCCCAAGGACATGGCCGTCTCGGCGTGGCACTTCCTCCGCCGCCTCCGGCCGGAC
CTGGACTTCGCCGTCGTCTTCGAGTCCGTCTGCGACGGCACGATGGCGTTCGGCCCGGTC
TGGGACCATGTCCTCGGCTACTGGCGCGCGAGCATGGCGATGCCGGACAAGGTGCTCTTC
CTGCGGTACGAGGAGCTGCTCCGCGACCCGGCCGAGAAGGTCCGAAAGCTGGCGCGGTTC
CTCGGAACGCCATTCTCCGCAGCGGAGGACGAGGCCGGCACCGTCGACGACATTGTCCAA
CTCTGCAGCTTCGAGCACCTCAAGGGCCTGGAGGCCAACAAAACTGGCTGCTTGGATCCC
CTTCTCCCCGTCCCGCGTGATGCGCTCTTCAGGAATGGGGCGTCCGGCGATTGGGTGAAC
CACATGACGCCGGAAATGGCGAGCCGTCTGGACAAGATCGTCGCTGATAAAATGCGCGGG
ACAGGCATTACTTTTCAGTGACTTTTGAACTGCTCACGTTGTATCATGGTTTTTATTTCT
GAAGTTTATACGAAGTCATGGTAGCCGGCCGAGCAAAAATGCTGAAATAAATCAAATAAT
GCGAGCACGGGATTTAAATCTCGCGAGTTGGGAATGCAACAATCCCTCTAACCATCCAAC
CATAAGTTGGTTAGTGATATATTCCTGGATTTGCCGTCTTTTTTCCTATTATTTTTTAGA
TTTTTTTTTCCTATTATCAGAGCATCTACAACCATCCATGGACGTGTCTGACATGTTTAT
TTTGACCCTTCATTTATGCTTGCATGCATTTATGTTCATACATTCATCATCCTCGTGTTA
TCTTAGTATATCATTGAGTTTGTTGTCCCTATGCATATGCCTCTCCCGGCACCGTCACCG
GTCTGCCTTGTCTCCCGTGGCCTTAGGGCCATGGTGGCGCGATTGATCCAGGCCCTTGCC
GGCGGGAGTGCTTTGTTTTCAGTTGTTCCTTCGTGCTTTGATAGGGTTAGTGTTTTGGAC
GATGGCGCTGCTCCCTGTAGATGAAAAGAGGTTCTCCCAGCATAGCCCCTGTTCTGATGG
TGTGTCTACCATCGTCGGTGGGCGTGTGGAGTGGTGTCTCTGGCAGATCTATCATTGGTG
GATTTGCTCGGATCTGACGGTAGTTTGTCTACGTTCGTGTGTTTTTGGGTCGGATCCTTC
TGATCTACACTACTCTTCGGCGGTGATTGATGTTCTGTTGTGTTGGCCTGGTCCTATGGG
GTCATAGCACGATAACTTCCTGACTGTCTACTACAACAGTAGCGCGCCTTCGGCTTGTTT
CAGTGCGTGTAGCCATTGCTAGAATGTTTAGGTATATGGATGTAGTTTTCATTATTTCTG
ATGTTCGTTGTACTATCATAATTGAAGAAGAATAGATTAGAAGTTTTTTTAAATGCATGT
GATTGATGAGGATGGAGATAGAAAGAGAAAAGAAATAATAAAAATATAAAATTGATCTGT
GGTAGGCCGCATCCTACGTGGAGGACTGTCTGGACATCCCCATATTATCCCATATTTGGT
GTGTGTATGAGAATTTTTGGACAACCCATTCATATGGATACAAAGTAAGGGTCCGGGACA
GTGCATTTTTTCCTTCTTCTTCTGTCTTGACAGTGACTACGATGTCTGGTTATACATTTT
TTTAACATAGTACAATCGACGTCGCTCACATATATGAGTATACACTCACTCTATGAATAC
ATGCACGCATATCCTACCCCTATGAGCATCTCCGGGAGATTGAGCCAACACATGCTCTTG
AGATTGATGAAGTCGTCACAGACGTCTTTAAAGTCGACAGAATCGTCTCCTTCCGTTTTG
TCGAAAGACCTGAAATAAATTCAAAAAAATGCGAGCACCAATGTCATGTCTAAGACTTAA
ACTCTGATAAATAAAAAATATTATTGTTCGTCTTACCATCAAATAAAAACTTGGTTCGCA
AAACAAGACAGCACTTGACGAACTCGACAATCAGATCACATTCATCTATAATTTAGTCAT
AAGGATCAGATCAATCTATATTTTAAATTATACGGAGCAGATCTACCTGTATTTTAAAAT
TATGTGGTTCAGATCTGCATATATTTCACACTTCGCAAGACAAAAGATCTACCTTATATA
TTTTAATATATGGATCAGATCTACTTATATTTAACCCACATCTTTTGTCGCTAAAAAAAG
ATTCTCTTCAGGCCTTGAAACTTGATTGAGCAAAAATACTCCTGTACTGACAATGATATT
ATCCAGTCTTCATCCGGAACGACTCTTTTTTTCTGATAATACTACACATGGTAATCAGAC
ACTCCTTCTGAGCTCTCCTCGGGATTTGTCATTTGGGGGTCTGATTGTAGATGTTTTTAG
TAGTTTGGTGAACTGGTTGGTTTATTGATCAACAAATGTGGTTTCTTCCCCGCCACCTTG
TTGGTTTATGAATAAGGAAATGATGTTCGCCAGTTATTCTCAGTTATTTTCCTGAAGAGA
AAAGAGGTGTGAACGAAAAAGAAATTGGCCAATACTCCCTCCGTTCGAAAATACTTGTCC
TAGAGATGAATGTATCTAGGCTTATTTTAGTTATAGATACATTCATTATATTCATTTTTA
GGACAAGTATTTTCGAACGAAGAGAGTATATCTCACTATCCAAGCACCTACTCATAAAAA
TGGCTGCAAGTAATCTAAATAGGAACTGGATACATGACACATAATAAACAAAAATGCTAC
ACTTACGGGCAAGATACGGATGAAACATACGGCAGAATTGCTGCCGCTTAGCCAATCCCT
CTGCCCCGCTGATTTCAAGGGTGGGCCCTGGTGCCCCAAGTTTCCAGTAAAAATGGACAG
TCGAGTCCGTAAGTTACTTTTCGTAGCTTCCGTCCGTAAATCTAGCAAAGCTCCATAATA
AATGGTCATCATATTAGAACAACTCCACTCGTCTAATCTCGGTCGGCATCACATGTGCAT
CAATGGATGTTCTTGGCTGTGCGGACGGCCCTTGGCGACATTCACCCCCTTGCGGTTTGT
GCATGGTATTCACTCCGCATGGCAATGTCCAGGTCCAGATAGATCGTGCTCACTCTCATC
ATCTTGTTGCCTCACCAGCCTCGGCATGGGTCGCCGTTGCTCTTTCCTCTTTTTCCTTTA
CTTCGGTCATTCGTGACTTTGCTTTTTGCAGGTGATATGTTGTGTGTTGAGCAGGTGAGA
TATGTTTTGTGTTGGTTGATTGTGTACAGCGTAATCATATAGAAATAGTGGGTGTATGTT
TTTTGTGTTTGTATCACCTTAATCCTACATTCCAAGTCAATGAAAAACGTCATTTACCAG
AAATAAAAACTCCCCTCGCCAAACACGCCGTGAATTAAAAAATGCTGGCAGGTAGTAGCG
GACATAGAGATGCTGCGATAGACAGATCATAGATGAGAAGTGGGTGGGATCCATTATATC
ATTTGGATATACATATGTCATATGTGGGGCAGCATGCAGGTTTGTGTTGGTTGCCCTATT
TTCTACTGAAGGGGCGTGTATGGTACTGGAAGTGTGTTTCTATTTCCGCACTATTTTCTC
TAATCTCTCTAAGACTCCAGCATTCCGGCGGCGCTCTTGTAAATCGAAGTGCAATTTACA
ACACAAGAAATAATGACTCTCAACGAATTTTTGATTCAGGTAAATCGAAGTTTAAGGTAA
TGTAAGAGTTGAAATCAATTCGCATGACTTAAAATGCGGAGCAAGTGATCACAAATACGG
AGGTTGGCATAAAGAAACACACGTTGTGGAATAATGATGCTAGTGCAATTGTAGGGATGA
GCAATACAAAGATTGAAAAAAATAACTTCACAAACACAAAAGGAGACGCTAGCTTGATAT
GTTTGCCAAAAAAATGAAATCTGAATACTACTCCATTCGTTTTTAAATATTTGTCTTTTT
AGATAATTTTTTATGAACTACATACGAATGTAGATAGACATCATTTAGAGTATAGATTCA
TTTATTTTGCTACGTACTTCTCGAAAAAAATTAGACAAATATTTAGGAACGGATGGATGA
GTAGTAGTATATATTGCTCTTTATAAAGTTAAAAAAAAAGAGCAAGCTGATCATAACCGC
AACTCCTATTGCAGTGCAGATTATTTATTCTTATCACAGTGCAGATAGATTCCATAATAC
ATCAACATCATATAGGCGACGCAACACAAGAATGCATCTTAGAACTCTAGACCAGATCCT
TTGAGCTTTTCCTCCACGAGGCGATCCATTTTCTCTCCCATTTCTTTGGTCATGTGGTTC
ACCCAGTCCCCAACCTTCCCTTTCCTGAACAGTGAGGAGTGCTGGATGAAAATCTTGCCT
CCCGCTCGCTCCGCACCGCCTGTCTTGTTAACGTCTAGGTTGCGAAGTGATTCGAAGCTG
CAGAAGCTCACAACCTGGTCGACAACCCCGCTCTTCTCCTCCTCTTCGGTGAAGGGCGCG
TCGAGGAAGCTCGCGAGCTTCCTAGCAACCTTGAGTGGATCCGACACAATCTCTTCGTAC
CTGAGAAACATCACCTCTTGCGGCCTCGCCAAGCTTTCTTCCCAGTACTGGAGATAATGG
TCCCAGAAGGGCCCGAACGGGGAGAAGCCTTCGCAGAACATGGTGAAGGCGTCGTCCAGG
GTGATGGGATCCCCTTTGCTCATCTTGTTGTCGAAGTGCCACCTTGACACAAGGGCGTCT
TTGGGCTCGCGGCAGAGGTACACGACCCTGCAGCCGACGGCGGAGACGGCCGGCGGGAGC
AGCGAGAGTGGGAGGTGGGTGGAGAGCAGCCTCGGCGAAGGGAGCGTCTCGAGGAAGTCG
AGGTCGCCACCCACGGCTCCGATGAAGGGCACGACCCGCTGCGGGTTGCTTGTGCGCAGG
GGGTGGTCGGCGTCGGCGAAATCGTAGCGGGAGCGGGTGGAGATGGTGAAGGCGAGGGCC
TTGAGCCAGGTGGTGCCGCTCTTGGGGTGGGTGGCGAGGATGATGTCGTCGCGCCGGGGC
TTGAAGTTGTCTCTGACGAGCATGAACTTTTGGGCCATGTGTGATCTCAGCCAGAAGTTG
TTGTGGAGGGTGAGTGGCGTCGACCATCCTTCCCTTGTGGGAAGTGTAGCTACCAGAGCT
TCTTCAGATGGGTCGTTGCTGGAGCTCTCTTTGATCTTAGACTCAACTTGTGCCATGATG
AGAGGGAGTGAGAGGTGGAAGAGTGTGTGTGGGTGGGTCGACCTGTTTGCTAAGAGATCT
GGGGGTATTATATAGAGGTAATTGGGTAAACCATGAATGGCTGGTAGCAGATGTTGTGTT
ACTATGGTAGCAGATGACTGGTACAGTTTTATATAGAGGTAGGTAGGTAACCATGAATGA
GCGAAGCGTGGGGTGCCGAATTCTTGAGAGAAAGCCAGGGGTGCATGTGCTAGCTAGCCC
TACCTACGCACCACAGCGACGCCTTTGGAATTCGGGCATTACGGTGGCCTTTGTTTGGGC
TCTACAACATCTCGAACAGCCGCGTTAAACTAGCGTCCCACAACAAATAAGGCCATTTTA
GCGCGCCCAACGCGGCGGGTGGCGGCATATGCAGTTCAGCGCGTTCGCCGAAACGCAATC
GCGCGCCGCTTATTTGCTGCGCCCGCTCCCGCGCGCTGGACTCTCGCGCGCTCGCTCTCC
GACTTCCATCCCCCATCCGGCCGCGCCGCCACCGTCGCCCGCGCCCCCCGGCGACCGTTC
AGGCGCTTCCCCGGCCTATCCCCGCGCCGCCGCGCTTCCGCCCC
