Map Locations of contig_1572076 (4530 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1572076

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_16001 1 1411 bp None Available Available None





CDS Structure of MLOC_16001






Contig Sequence (4530 bp)

>contig_1572076 4530 assembly3_WGSMorex_rbca.fasta
GAGGGAGAGAGTGAGGGCGAGGGAGAGGGAGAGAGCGAGGGAGAGGGAGAGAGTGAGGGC
GAGGGAGAGGGAGAGAGCGAAAGGGAGGGGAGTGGGGGATGGGGAGGTGAAAGGGGAGGG
ATGGAGAGAGATAGAGAGATTTTTGGACATTTACCATTGTTTTGGTGCTTTGGTCTTCCC
TTCCCTTCCAACTGGACCGGGCCCAACGAATAAATCATCCGACCGGGCCCAAGCTTCTCA
AGGCTGAAGCTATTTTGTGGTAAGTAGCCTTGTTAGTCGCTAGTATAGTATTGTACCTGC
CCAACTTTACAGTTAGTTTCTTTTCCTTTTTCTTTTCTTCTTTTCTTCTTTTTTTGTTTT
TTCATTTGTTTATATTTTTTAAAAACTCTAATAGAAAAATATAATTTACTCATTGTCTTC
TCAAATACCACAATTTTGAAAAATGTTAATGCGGTGCATATTTTTTGTTGCTAGCTTAAT
TTTAAAAATAAATTGATAACTTTCAAAAATAAAACGCTTGTAAGTTTTTAATATGTTAAC
GCGTTTTAAACCAAATGTACATCACATTCTTAGAAAATGTTTATACAATGTAAAGACAAT
GATTGTGAAATTCAAAAAATGTTTCAGATCTTTCAAGAAAATGTTCATGTGTTTCAAGAA
ATATGTTTGGGACATTTAAAAATACATTTATGCAATTTAAAACAGATTTGTGTTGTTAAT
TTCGTTTTCAATACGTGTTTGAAAAAGTATTTAACAAATATTTAAAAAAATAATAATCAT
GTTTTTGAAAAATATTTAAAAAATGTTTTAGATGTACATGAAAATTCCACAATGTATATA
AAAGTAAACACCAGAAAAATATTTAAAAAGTGTTGATAATGTATTTTAAAAAAGTCAAAC
ATGTATAAATGTTTTTCTTGATGCAGATGAAATATCTAATGTGTATGGAAAATTAGACAT
TTCCAGAAAAAAGGAAAAATGCAGAAAAACTCCGATAAAAGAAACAAAGAAAAGTGAAGG
AAAATAACTAAATAAAAAGAAAGAAGGAAAACCATAGAAAACCCCCGAAAATCGTAGAAA
ACGAAGAAAACAAAGTGCAAAACTGTAAATAAACTGATAAAAACCTACAGAAAAGACCTC
GCGCAGGTACAGTGTTGAGCCGGCCTTATAAATGTAGGCGAGACGCTCCCGCGGTTGAAC
AAGACCAAGAGACACACTCTAAGTATCTGCCAACCACTTTTTTGTTTTTTTTTGCCGTTG
ATAATCTGCATACTACCGGGTCCCAAGTCAACGTATCAACCTTGATAAAATCGTCCATTT
CTGCTGAATTTGCTAAGATGAATCTCTTCAAGACAAATATTTAGGTGTGCCGACTAATGT
TGGTAGTTCTCGGAATGAGATGGCTATGGCAGAAAAGAGCCCAAAATTCCAGGGCGTGAC
CATTGCTTTCTTCAGATAGTAAATCACCATCACAGCTAAAATTAGGTGACCCAATCCTTT
ACTAGTGAAATGACATGATGTTGGAAAAGCCAATAAATTTACAGTGAGGTCGGAGAGTCA
CAACAACATTTCATCAGCATTCGCTAGGTACCTACAAGCAACAGTAGGGTGAAAGCAGCT
AGCTAGCTAGCTCATCCTTGCGCTTCGCAAGAAGGAGCCAGTCCTGGTGATCTCTCGCAG
TGGCTTATTGGTAAACCGGATGAGGTTGTAAGCCCATGCGCCAGAAACGGCGCCGCCAAC
AGGCCCGACGATGTAGACCCAGATGCCGGTGTAGCGGCCGAGGACCATCGCCGGACCGAG
GGTTCTTGCAGGGTTCATGGATGCTCCTGATATAGGCCTGCACATCACAGCCCGTGTTTG
GAAAATTATTAATCCCTCAATATGACAGAAAGACAACATCAGTTCGAGATATTTTACTAC
TAAGTTCATTTCATGAAACAGTCGTAGAGTGAAATAAAATAGTGCAAAATTTCAGCAGCT
TCTATACACAAATTAACGTTTAAGTTGTTTTTCCAATTTGTCCTGGGGCATCGGTAATTC
CTTAGCCACGCAGCATTCTTATACGTATACTAGTTTTTCTAAGAAAAACAAATCTACTTG
TTAGGCCATGTGGTTGCTGACCCAATCAGTACATGGATCCCAATATGCCACGCTACACAA
ATATTTAAAAATAAATACGTAGATGAATTCTCTTGAAAAAAGACACATACCCCCACTTTT
TTCAGCCAATTTTACCTGTTCCCAAAATTTATAGATAATAATTCAAATTGTATACTCCAT
TATTTTCTAGTTCCACATGGTAATTTATGGTCATGCAATGCAACTTAAAGGTCCTTCAAT
TGTACTTCCACATTGCAATTTCGAATAATTTCGAATACTTCAACTTAAAGGAACCCGCCA
ACATGTGGCAATCAATGAATCCTCTAAAAAAAGAACATGTTTCAATCAAAAGATGACTTT
GTTGACAACCCAAGTCCAAAATGCCGAGTAAAATGAATAGAGTGAATGTAGTAGTCATCG
TGGAATACCCGGCAAAGAGCACGTTTAGTAGCACAGTAGCTCCAACCGCCAAACCAGCGA
GCTCACCAATCTGCAAGGAGTGAGAGAGGAAAATTAATGGTGGTCCGAAACAATTAGTTG
AGCAGAAAACTAATTAAATCAATGGCCAGGACAAGGATTACTTACGGCTCTGTTGTCGGT
GGCGACTCCGGAGACGACGAACATGAGGTAGAAGGTGATGATGAACTCGAGCACCAGCGA
CTGGACGTCCGACCCGGACGGCACCGTCCCGAAGAAGTGCTCCGGCGCGCCCCCGAACAG
GAGCCGCAGCGTGATGCTGGCCGCCGTCGACCCGAGCACCTGCGCCGCCGCGTAGGCTGG
GACCTGCCTCCACGGGAAGCGGCCGCAGGTGGCGAAGGCGAGCGTGACGGCGGGGTTGAA
GTGCGCCCCGGAGATGTGGCCGACGGAGTAGACCATCACCATGACGGCCAGGCCCCAGGT
GATGCAGATGCCCGGGAACGTCACCGTGCCGGCCGTCCTCTTGTTCACGGCCACCGCCGC
GCAGCCGGCGAAGATGAGCAGGTACGTCCCCAATATCTCGGCGAGGACCTGCGCCCATGA
TCATCCAAGAATGTCGCCATCAGGTCAATTGCTTGATTGCTTGTCCAAGTTAGACTCATA
ATGATAGGGTAGGGACTTGTGACCGGATTGCAAGTATGAATATGATGCGAAGACTGGCTG
TACGTAGCAGCCAGCACAGCCAGTAGGAGACATTTTCAAAGGCAAACAAATAGTCCTTCG
GAATTTTCCTCTGGCCGAAACGATAATAATATTGTTGCGTTTGGATTGTTATATCGCTAC
CGGCTAATCACGTGTACCTTGCAGACGAAAGTTGTCATCTTTGTCCACTTGTTTGACTCT
TCTGGTGTTTGAACTCTGCCATGTTTTATTCTTACCTGAACTTTTGTCCATTAGGTGTGA
ACAACTGCAACTACTTTTGTGGTGGATGGATGGATGACCATGCACGCCCGAATCACATAA
GGATTCTCAGAACCGAAAACAAGAATAAAAGTTCCTGGATGAAGAATAATTAATCTGGTT
GCGTATGCAAACATACACACCTTCTGCACGAATTGAACGGAGATCATGGGCTGGTTGCTG
GTGCTGATGAGATCTTGCTCTGAATTTTCGCACCCTGCTGGGTGATTCGCTCCTCCTCTT
CCTTCTTCCAGAGCTCCGGCGTGGTCTTGCTCTTGCAGGCCGTTGGCTCCATGCTCTCCT
CCTCCTCCTGCCATGCGCGCGCTTCCGCTCTCTCCCTTCATCCCTCTCTCTTTGTCCGGC
TGTCTATCTCTATCTCTATCTCTATCTCTATCTCTTGTTTGGATCCGCGTGTTGATCAGT
ATGCTTCTGCTATTTATGGGCTCCATGCTGCCATGCTCAAGCTAGATAGCGAGGTGAGGT
CCATGCGTGATGTGTCCTCCTAGCAAATGTTATCTTGTGATTTATTGGGTTGACCACCGC
ATCGCGAATCCCCCTAAAGTCTGGAGACGGTAGCTGTGCACCGGAAGTTTCTTGGAAGAA
TGCAAATGGATTTTATTTATTTTTAGCCTCATCAAAATCGGCAAAATTTCCTTGCGCACG
GCCATGTACCACAAGAGTAATTTGGATATAGCTAGAAGGAGAGAGGGAGATGGATTGGTG
GAATAGTTAATGTATTGCTTGATCCTCGTGGCATCTATACTACTAATAAAAGATCAAACG
TAAACTTCACTAGGTACACACACCTATTACCCCCAAAAAACAAATACCAATCACCACCAC
ACAATTAGACAACAAATAAAAATCTAACGGCCTTCCACCATCCACGCAGCACCACCGTGT
GCATTTACCAATTAAAGTAAGGCTCACGTGCTCCACCTCCTCCTCAAAGGAAAATGAACG
CCTGGTCAATTAGGAAACTGTAATCACGAGTGCCTATCTAATCCCACAAAATCAGCCTCC
TCCTCCCCCTCCCCGTCCGCCCCCTCCCCC