Contig Data
morexGenes
Links



Map Locations of contig_1571937 (5069 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1571937

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15947 3 1715 bp AK369613 Available Available None





CDS Structure of MLOC_15947






Contig Sequence (5069 bp)

>contig_1571937 5069 assembly3_WGSMorex_rbca.fasta
TAGTCTGATTTGGAAATCATTGATTGGATTAAGAGGAGGGTGAGGCCCACCCACCCCTAA
AAGTCAGGGGGGCATGTTTAGATTAGTTGAAAGGTTTAGTAAACGTAAGTAGGATTTAGT
AGGTCTAGCATTTTCGATTTTTCAGAGTCCGTCTGCCACTTATCAGTTCATTATGAGGTT
CATTGCAGATTTGAAGGCAGTTCGAAAGAAGGAAGCGGGGTCCCTGGTGCCCCTGGCCGA
CCGATCGATGCGGCCTAAAGCCCCGCCACAAGGTTTCGCCAAGATCTATGTGGAAGCCGG
CATCTCTTCGAACCAGATCAGGGAAGCGGCAGTAGCGGTTTGCAGCCATGGAATTAACGG
TGCCGCAACGTCGGAAGCCACCGCGTGTCGGGAAGCGACAGTAGCGGTTTGCAGGGAATT
ATATGGGCTGCCCCTCTTTGGTTATCGATCCATGGAATTAATGGCGTCGCAACGTCGGAA
GCCATCGCGTGCCGAGAAGCTTTATCCCTCTCTGAGGATCTGATGATCCACAACTTCACT
ATTGCATCAGACTCTAAGCGAGTAATAAGTGTCTCACATTGCCGGAGGAAGCAACAGAGC
TTATATGGAGTATTATCACTGAGATCAAGCGTAGTGTTATAATCACCCTGCAGTAGAGAG
AAGGACGCTGCTGATCCCTCCATCCACCCCTGCGATCGAGGCGTTGAAGATCAGCCACGA
AACAGATGCAGCGTGGTGCTCAAGGAGCCGTCATCTTCATCTCTCCGCCCTCAAAACGCC
GGTGAACTGCTCGGCGACGACCCCACGGGCTTGGGTGGTACTTCGCGACACGGTTCTTTT
CCGGCGCTGTGACTGCCGACGTCATCGACCGATCCAGCGGCTCGCGCACCAGGGGTATAT
ATCGTCTTAGCTGGGCCGTGTACGGAGTCCTGAACGAACGCGTACACGAGCGCGTTGTAT
AGTACCGCCTCGGGGCTCGAGAGGCGCCTACATAATCAGATCAGAGGGCAAGCCTTCAAA
ATCACTTACCTGGACGGGGTCGACGACCGATCAAGAAGGGTCGTGGCCTAGATCAATGGC
TCGCATCGCACTTGGCGAGCGCGTTGGCCTACCATCTCCTCTCGTGGGAGAGCGGACGTC
TTAATTTGTGATAGAGGGGGTCGCGCGGCCCCTGCCAATTCAAGTTCAAACTTAAATTTC
GCCTTTGCCGATTCAAAGCTTAACATCAGTACCCTCCATGAGTTTCAGGATCATGCAGAC
GCAGATTCAAACTTTAACATCAGCACTCTCCATGAGTTTGAGGACCATTACAAATTAGTA
TCGTGTAAGGACCATTACAAATTAGTATCGTGTACTCCCATAAGACAAGTTGTATTGTGT
TTGTTCACTCACTTCAGTTTTGTATGCAGTTTATATTGAATTACTCAAAACATCTTATAT
TTCATTACAAAGGGAGTGGCTCAGAAGGCACAAATCATACTACACTGGAAACATGTATCC
TCAGAATGGAGAGATTAGCATGGATTCGTCATTGTCAAGGGGGGATACATATGGATCTGG
AATATGGCGAAATCGGATCGAATTTTCGCATATATGTACATGATGCCATACATGGGATAA
GGCTACAAAAGATATGTACAAGTCTTTGTTATATTCTGGGAACTTGATCAATGCATGGAA
TCGCATGGTTCAGCAATGGGTAATCAGCCCTCTCCAGATGACAGGGTCAGCTAATGCCTG
ACCAACCAAACAGCATCGTCCGTGGCCGCAAGAGGCGTAACGGTGGTGCTACCGTCTTCA
AGCAGCAACTTGAGGAGGTGAGCTGGTGCCAAGGCCTTCAAGAGCTGCTGCCACCTTCGC
AGACGTCCCCGCGGCACAACGGGCAAACCCTGCAGCAGCCACAAAACCTTAGGAGATAGC
TAGCGAAACGGTCCCGTGTTATCGGCGATCCAAATTGCCCTTTTGCATCAGAAGAAGGGC
CTATTTTTTTCTCTCCTTACCTGTGTATTTCTTTAAGCCACTTGTCAACACACTGCAGGT
GAAACTCGTGTTTGCACGGAAGACTTCTTATCTGATCTCCATCCTCGTATTCAGTTAAGC
AGATATGGCACCTGCAAAAGGCGAGAAGCACAATGTTAACATTTCAGCGTCTCCCAAGAA
CCACTCTGAACGAAAAGACTAGGCCAGGAAAAAGAATAGATTTTACGTCCATATTTTTAG
CTAGAGAACCCAGACCTCAAAGAATGGAGCTTTAAGTGTACTATAAATTTGATATCAGAC
ATGTACAAAATAATCATTCTCAACCCCTGGGTGCTAGACAAAACAAATTTGCAAAGACTG
AATGAAGACAGGTGACGAACACCGAGCATCCACACGATTCAGGGTTTCTAGATGCTGTAC
ATGAACTTCTACTCATCAGTTATCACAACATTGCTATCCCCTTTATCCAGGCGCTAACAG
CAAAACGTGCAATGTCTGCAAAGGGCAAACTGTGTCTAGTAATTCAACTTGATATGGCAA
TTTTAACAGCTAGCTCATTGTGATAGACATAATGTCATTAACCAGAACATGCTTCCCTCG
TAAGATCTCTAAGATGTCAACAATGCCTATAGTGAGCAGTTAGAATTACCAACTATCAGA
AACAATGAAACATACCAACATTAGAATTAGTAAAACTGCTTCCTTAGGAAAATTAGACAG
ATTAAATGACAAGAAGCTCACTGTTCCATATCAGCACTGCATTGGGCTGTCTCAAGCTTT
TTGTAGCTCTTACATGGTAATGAATTAACCACAGACTCTGGAGCTTGAGCAGAGGCCATG
GAAAGTGAAAGTGACGAGGGTTGCCGATGAATCTCATCCAATACCTGGAAAAAATTGTGC
ATGTAAGCATACTAACAAGAAAAGAAATCTTATACAAAAACAACAAAGGAGCAGTGAAGT
TGACATAATCATCCTTTAAAGACTCCACTCCTAGTTTAGTCAATGGGTGCAAATTAACGT
CAATTACAATTTACATCCCTCTATAGACTGAACTATCAAAGTTCCTACTTCTAATTTTCT
GGTGGTGCTTTGGCCTCATAAATTAATCAACCATCATACAGATATAGCCACAAAACAATC
CCTGTAATACTGACTTTGCTCTGCAACTTATGCGGCCAACTTTATTTTGTTGTTGTCAGG
TAATTTACTAATTAAAACAGGTTGACAGGACCTTTATGCAAAAGAGGAAATAGTTGAAGT
TCCAGTCTATTGTAGTGATTTCAAATTTCAATACGAATCTGCATGAAATTATAAAGGTGC
TGTGTTGAAGTCTGTAACTGGAGTAACAGCTGCATATGGCAACTCATACATTTGTCAAAA
CTCAGAAGTAAAGCAGTGGAACAGTTGTGTCAAAACTCTTCGTACCATATATATAACATA
TATGCAGTTGTGTCTCTTAGTTCTTCTATAAACACAACTAGAATGATGATGATAATCCAA
TGAATCAGACTTGAGGAACACAAATTGAACACACGAATGCTAAATACTCCCTCTGTTCCT
AAATATAAGTCTATTTAGATATTACACTACGAATTACAAACGGATGTATATAGACATACT
TTATAGTGTAGATTCATTCATTTTGCTCCGTAAGTAGTCCATAGTGGAATCTCTTAAAAG
ACTTATATTTAGGAACTGAGGGAGTAGTTCCCAACACTTACATAAAAACATTTAAAAATG
AAGGGAAAGAGCAAACCTCAAATAATGCCTCTGTTAACATGACAATTCTTGATATACTTG
CACGAGCACTAGATTCTTCAGCGACCAAGAATGCATCACAGGTGCATCTGCCAATTTGGT
GTATCCCCAAAGGACAAGCAGCAGTACTTTGCCCGTTCCCACTATCAAAAATAGCACGAC
GGTGCTCCCTAATCTGTAACAAAACAATAGCACCAACTTCAGGACACATGTGCATGAGAT
CAAGCAGTAAATGACTAAGACCGTAGGTAACAATGCTACTGAGTGTAAGAACCAAAACTG
AGAGCACATTGGGCGTAAAAGTGATGCAGAAATGAAACAGCATATGCAGCATATAAAGTA
GGTTCAGTTCACGGAATTCTGAATATGCTGAAAGCAAATAGAGAGAACACATGTGATGAT
TAAAGTACATGTTTTTGTTCAGATAATAGTGCAAACCTACATCGACAATTAAAAACTTAA
TCTGGACATAGTGGCACCAACAACATTTCTAAATATGGAATTGCAACATGTATGAAAGAG
TAGGCATAGCTGCCATAGGCAAGAGCAATTACCCGAGATCTTGAATACTGGTTTACTCTG
ATTGAACCATGGCGTCTACGATGGAAGTAGCGTGCCTCCTCAACCTCATCCCCAAAAAGA
TCATCACCAAGGTCTAGCCATCTACTGTAAAATCCAAGATCATCAGTGTCTGAATCTAGA
TAACCTCTAGAACCACGTCTTGAAAATGAATCCCATAGGACCCTTCTATGATTTCTTCTT
GTTTCACCATTGCTCGAATCTCTAGAGCGCTCTGGGCCATCATTTGAGAAAATGATGTCT
TCATGCACTGTACTTCCACCAATCTGACCATGTGACACACTGAATATGGTGGGAGTATCT
TCTCTGCTAGTAGTTGCATCTGGAATTGATTCTCCAATAATGGATGATGCACTTGAAGTA
GCAGGCAACACAGATGTTAAGCTGGATTGAGAAACATCTGAGCTTTCACTTGACAAAACA
TCTCTGGATGAAGTCCTGCGGAGAGCTGTCTCTCCATCTTCCAAGCCAGGCATGATCCTT
TCAGATGTGATCAGCGAGGAGTGGAAATCAGACTGGGAAATGGAGCCACTAACTTCTGTA
ATGAAAACTGCGTCAATGTGGACATTATCAGGTGCAGGTTCTACAAGCTCTTGTGCCATA
GGACTAACCCCTTCTCCAGATGTTCTCTCATCATTGCCAGCTTCATTACTGAAATCTCCC
CTAATCATGGCATCCTTTCCTGATGAACTCTCCAGGCCACTCGTTTCAGCATCTTTAATT
CGCAGGGCATGCTCCTTGTTCTCATGACA