| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1571887
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_15992 |
7 |
5190 bp |
MLOC_15992.6 |
Available |
Available |
LOC_Os09g33680.1, FRAME:-3, EVALUE:0.0, 13109.m03354 protein Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed |
| MLOC_15925 |
1 |
1957 bp |
MLOC_15925.1 |
Available |
Available |
LOC_Os03g04530.1, FRAME:+1, EVALUE:0.0, 13103.m00467 protein cytochrome P450, putative, expressed |
CDS Structure of MLOC_15992
CDS Structure of MLOC_15925
Contig Sequence (3429 bp)
>contig_1571887 3429 assembly3_WGSMorex_rbca.fasta
AAAGGTTAAGCCTTTAGTCCCGCCCCTTTAATCCCGGTTGGTGAATCGGGACTAAAGCCC
CTTACAGACCGGGGATATAGGCCCTGTCCCCACTAATGACATATCCCATTATAGATATGT
AAGATAAAATGGCCTGGGGACTAGGGGCCTTCCGACTGTTTTTCGCTGTGGTGACCAGTC
AGCTATAATGTTGTGTAGTGGTGGATGCACCGACCAGATGTGATTAATGCCTGAAATACA
TCTCGCCATGATATCTACCAGTTGCATGCATACACGTTCTTGTCATCCCGAATTAGTATA
TATGCGCAAATTGTAGACCATAGTACATATGCATGCACCGACTTGAGATCGTGGTGGAAG
ATGACCGGGGGCCGGGTACGCGTGATGGACTAGATAGTGATATGTGAAACCGAATTAATC
AGAGACAGTGTCTACACCAAGGCCAAATTGTAGACATTGTCTTCTCCACGATAGATCATA
CTCCACCGATTATAACATCTTAGTTAATGCAGCATGGGCTTAACCAAAACAAAAAGGGAT
TTGGCATTCTGGGGTAATACTATCAAGGATTGCCTGAATCTAGTTAAGCAACTCTCATCG
TTGACTCTATTAATGCATCCAACTGCCATCGCTAAACCTCCCACACATTTACTACAAATT
TTCAGATTTTGTGCCCGAGCATTAACTAATAAACACACCCATATTCATGGCTGCTGCATG
CATGCCACCGAGGGAAACTTCTCACCATATAAATGGAGCCAAAGCCATGTCCATGCAGCA
TAAACCCAAAGCACAAGCATCTCCCCATACACTACTCACAACAATGTCTACTATGTCATT
CTCGCAAGAGCTGCTCATCTCCACGCTCGCCATCATTCTTGTTTCCATGTACACGTTGTA
CCTCAGGTCTAGTAGATCAAAGGGCCCAGCAGTGCTCCCCACAAACTGGCCAATAGTGGG
CGTGCTCCCCTCCCTTGTCGCCAACCTCCACAACTTGCACGACTACCTCGCCGTCGTCCT
CGCCGGATCAGGGCACAACTTCAGGGCAACCGGCCCGCCGGGGACCGGGATGCGGTTCTT
CGTCACCTGCGACCCGGCCAACGTCCGGCACATCTTCACGTCCAACCACGCAAACTTCCC
CAAGGGCGCGGAGTTCGCCGCCATCTTTGACATCGCGGGTGGCAGCTTCTTCACCACTGA
AGGAGAGCCCTGGCGTCGGCAGCGCACAAGAGCCCAGAGAGTCTTGAGCAACCCACGGTT
GGTTGCCACTATGACCGCTTGCTGTCTTGACAAGGTGGAGAACGGCCTCCTCCCGGTGCT
CATGCACATGGCGACCACCGCGACCCCGTTCGACCTGCAAGCTTTGACAACGAGGCTTGT
GTTCGACATAACCGCCGCGCCGCTCTTCGGCGTCGACCCGGGCCTCCTGTCCTCGGACAT
GCCGCCCATGGATGCCGCTGTCGCCATGGACACGGTCATGGAGGTGGCCTTGTTCCGGCA
CATCGTGCCGGCCACTGGCTGGAAGGTGATGAGGCGGCTAAACATCGGCCCGGAAAGGAA
GCTCGCCGCAGCGCACACCGTGCTGCGCGGGTTCGTTGCCGAGATGATGGAGAGGAGGAA
GATGAAGGAACATGCTGCTGCTGGTGACGAGGAAGCCCCTTCGTCCGTGGACATTCTGTC
TTCCTACATCGACGATCCAGACTACCAGCAGAACGATGGCTTGCTCCATGCGACGCTCAT
CAACTACATGATCGCCGGGAGGGACACGATCAGCACAGCTTTGACATGGGTCTTCTACAA
CCTCGCCCAGAACCCTCGGGTCATGTCGGTCATCCGCAACGAACTATCACCCATCGCATC
ACGGAAAGCAGCCAGCGATAGCAGCAGCACCATGGTGATCTTTGAACCCGAGGAGACCAA
ATCTCTTGTCTACATGAGAGCTGCCCTACAGGAGTCTCTCAGGTTGCACCCGCCGGTCCC
CATCGAGCGTAAGACAGCGGTCGCCAGCGACGTGATGCCGAGTGGCCATGTGGTGCATGC
CGGTGACACCTTATTGATTTCTCTCCACTCCATGGGGAGAATGGAAGACGTGTGGGGGAA
AGACTGCCGGGAGTATAACCCAGATAGATGGCTCTCAGAGGATGGCAAGAAGCTGCGGTA
CGTGCCGTCTCACAAATTTTTGGCATTCAGCTCCGGCCCGAGGATTTGCCTTGGCAAGGA
CATCTCATTTATGCAGATGAATACTATTGTCGCGGCAATGGTGTGGAACTTCGATGTGGA
GCTGGTTGACGGGCTCAAGGTCCAGCCCGAGATGTCTTGTGTACTGCGCATGAAAAATGG
GCTCATGGTGAAGCTGAAGAAGCGAGAAATGTGACCTTCGGCCTCCTTTTCTTATTTGTA
TCTTGTGTGAGCCTTTCGGGGTTCGGGACCTCAGGGTATTTGTATGTGTACTGCTATAAG
TTTTTGTGTGCGAATGTTTTGCTATAATAAGTTGATAAATATACGTAGACCCTACTTATC
ATATACCCACTTCGTCCCAAAATAAGTGACGCGGCGTCCTACTAACTTTAGTATATTGAT
GAAAATGTTTGTATACGAAACAATGCTACGTCACTTATTTTAAAACGGATGGAGTATGTA
TTATTGATGAAAAATGATTGTGCCTTATTGTTTCATATCATGTTTAGGATGCAACCATCT
TCTGGCAAGTGACAAAGGAACATAATTCACTGTTATATATAGAAACTACAAATCAATACA
TAATCATCAGACTGCGTAAATAATCATTTCAATCCTTATTCTCTTGAACCCGATCCCAGA
AGAATACTCTCTTCATTTTTATTTACCACTACCAGAACCAATGAGTTTGCCTAAGTGTAC
TTTATACAATGTTGAGGATATTGCTTATTGTTAGCGTCTCGGACAACTGAGGATTTAGAG
ATTGGTTGGAACTCGGATGACTAATCGGTTTTATCCGTTGACTATTAATCCGCCATCTTT
TGCAAATCTCAGGTTCCCAACACTAAAATATGATATATTCAAACACCAAGAAAATATTGG
ACAAACTTGTTACCTTGATTCCTAGCCTTTGAGTCCTCGTATAATGATAAACAAAATAGG
ACAATAGTATATATTGCATAACAAGGTCCACAAACACAAATAAATATAGCTTTTGCAAAC
ATACAACTAGTAATAGGCCAGATTTATCAATAGATTCCTAATAAATCGCTTGTGAGAGCG
ATAATTTGACCCAAACGATAAACGATGAAGATAAGAGATCATCTTATCGGTCACCCCCGA
GTAGTGATAAATCAGGCGATAACTCGCACTAGTGGGGAAACTCGCACTAGTGGGGACAGG
GCCTATAGCCCCGGTCCGTANNNNNCTTTAGTCCCGGTTCACCAGCCGGGACTAAAGGGG
CGGGACTAA
