Contig Data
morexGenes
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Map Locations of contig_1571868 (3787 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1571868

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15917 2 1490 bp MLOC_15917.1 Available Available LOC_Os11g24070.1, FRAME:-2, EVALUE:1e-31, 13111.m02293 protein LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MLOC_15916 1 764 bp MLOC_15916.1 Available Available None





CDS Structure of MLOC_15917






CDS Structure of MLOC_15916






Contig Sequence (3787 bp)

>contig_1571868 3787 assembly3_WGSMorex_rbca.fasta
CCTAACATCTAAAGCCGGAGACCCTGACCGAGCCACATACCGGGTCCAGTTGACATGAAT
GGCTGAGCTTTACTAAAATTCTTCATGTTTGCATGTTTAGATCCATTGTCTCTTCAGCAA
AGGATATTGAGGGTGTTAGATTTGAGCAAGAGAGCCTATTAGCAAGAGAGCCTTGGAACG
TTCGTTGTTGATAGCTTACTCTTTCATCGTAGTATATGTGTACAGTCTTCCGACCAACAC
CCTATAAGATAGCCTATGAGCAAGAGAGCCTTGGAACATATGTTGTTGATAGCTACTCTT
TCAGCATACTATATTTGTAGAATCTTACAAGTAATACCCACTGTCATGATCTCATAAGAT
TTGTATTCTGTACACACAGATGATTATTGATGTTGCTTTAGAGTATTTGGCTTTCGAAAT
GTCTTTGAGAAATGTCTTTCGTATATTTATATTCTTTGAAATATTGTAATCTATAATAAT
GTGTTTTCTCTCCTTTTTAAAGCACAAATCACTACTTAGGTTGGAAGTATAATAAACTCC
TCATTTGCTTCTTATGTTCCATTGCGCTAAGGAATACATAACACATAGATTTGATTGGTG
GTGAGAATTCGCAAGAGCGGCAGCTCATACCTACATACAAGAAATGGTGCTCTGACTCAC
ATGTTACTTCATTTGACGTCATTATCAAAATTCCAAATAAGTATAACAATAGACAGCAAG
TTATCATGTCAACTAGAATGACCAGAGATATAGCTGTTGATCAGATGTGCAATCGTGGGT
ATGATCAAATGTCTCCTTTTATATGTGACTGAATTCAACTTGAGATGACATGTTTTGCTC
AGCGAATATTGTACATTGTCCTGGTGGAATGGTCATATATTTAAAGTTGTATTTTAATGA
AAAAAATAGTCTTCAAAAAGGAGAATATACAATTTCGCTCACAGGAATAACTGAACTTTT
TTTAACTTTGCATAGAAGTATGCATGCTTTTTCCATTTTTTTTAAGTAATACTCCCTCCG
TTCCTAAATATAAGTCTTTTTAGACATTTTACTAGTGGACTACATACGTATGTATATAGA
CNNNNNNNNNNNNNNNNNNNNNCTCATTTTGCTCCATATGTAGACCCCTAATGAAATCTC
TTAAAAGACTTATATTTAGGAATAAAGGGAGTAGATATCATGTCAACTACTCCTCCATTC
CTAAATATAAGTCTTTTAAAAGATTTCATTATGAACTACATACTGATGTATATAGGCATA
CTTTAGAGTACGGATTCCCCATTTTGCTCTATATGTAGTTCCTAGTGAAATCTTCATTCA
TTTTACTCCGTATGTAGTTTCTAGTGGAATCTCTAGAAATACTTATATTTAGGAACGAGG
GAGTATAATGACCAGAGATATACAAGTATGCACACCATTTCCTTTGCTTCATATGTTCCA
TTGCACTAAGGCCAGCCTGCAAAAGCATACGGCTTCATATGCATGATGGCGACTTTAGAA
TAGTAGTAGCTCTTGCCTCTTAATCATTTCAAATAACGACGCATGTTAACCAAATAGAGC
TAGATTAATTTATAATCCATATACCATAAGTGCCCATGGTACAACGTACAGCAAACTCCC
GTATGTGTCTCCTCAAAGGGAGTGAACAAACAATCAAACACTGATACAAAACCGATACAA
CAGTGAGCGGCCATGTAGAGCTGGCTCAGCGTACGTCCTCCCCTCTCTCTCTCATGGAGA
TCATAACAGAGGATTTATTCATGTATATGTATATATGTGTATGTGACCTCAACCTACCAA
GCGTCGATCGCTGGAGATATGGGGAGCACGTGTTCGATCAGTGGATCTTAGAGCAGTCGA
CACTGGCGCTGATCGTGTAGGGGACGCTGACGCCGCACCTGGAGGGGATGCCTGCGGCCC
TGCCGGCGTTGTACGCGCCGGCGACACTCTTGAGGCACCTGCACGTAGCTTGCTTGTCGG
CGGTGCTCCGCGCTAAGCCGGCCAATCTCTTGACTCCGCTACAGCAGCCCGCAGAAGGGC
TGGTGCCGCTGCCTTTTGCGTAGGCGGCGCAGGGGCCCAAGGCAGAGCTCACCTGGCCGC
AGGTGATGGCCGCGTCGGCGGCTACGAGGAGCATTGCCGCCACCAGGGCGACCAGCGCGA
GCTTGGTTGCTGCAGTGCGAGCCATCTCGACGGACTAAGGTGCAGTTGTGGTGGTGGGCT
CACGGGGAGAGGGTGGCAATGAGATAGCTAGATTTGCTTCTGGTACTGGTGAGGATGTAT
AGGGGAATGCATGTGCTTAAATAGGGCATCTCACGGGGAGAGGGTGGCAACGAGGAATCG
CCTTGGGAATAAACTGTAGTGCTAGCATGGTGTCAAGTATCGTGTCCACGTGGATGGGTT
CGATGTCGATGTGTGTTAATTCCTCAATTTATAGGCAGTTGTTAGTAGTTGGGTTGGACT
GATGGGTACTCATTAATTAATTATGGAGGTGGTTAGATGTTGGGCAGTACTCCTAGTAGC
AGCGACGATGGATGGACCAAGCATGCACCATGCACTCTGGCGGTGGACTGCCTAATTACT
GCGTGGCCCGCGTCAGATTAATACTATCGAGAATAGACATGTACGTATACTCTCTTTGAA
TAATTGATCGTCTTCATGGCGTTGAGCTTGACAAATGAACCAATCTGATGCTGCTTGGGT
TCGACTACTTTTCCTTGCCATCTCTATGCCATAATTTAACATTGGTTGATGTTTTATTCA
AACCTAGCTACTTACATTTTGACTACTAGCACTCTGGCGGTGGAGTATTGATTTAGTTTA
TAGCCTTGTATTTCCTTCATTTTTAAATATAAGTCTATCTAAAGATTTTACTATAGACTA
CTCCATACATGTGAAGTAAAACTAATGAATCTACACTCTAATATCGATCTACATACATTC
GTATGTAGTCTGTAATGCAATTTCTTAAAAAGCTTATACTTAGGAACGCAGAAAGTATTT
TCTAGTAGTACCAATGGTATGTGCATATTTCCCGCAACAAGTATGCCAACAATATACACA
TATATCTCCAGTATTTAAGATCTACTGTATATCTAAACTTCTATCGCCCACATCTTCATA
AAAGTGGCCAATTTGCTTCTCATCTCTTGTTCTAAACATGTCCTCACCGATATAAGGCAT
GCCCTACCACGTTGTAATATGGAAAGTTCAGAGTGTAGGTCGGCTCTACTATCGAGGAAC
AAGTACAAGATGTTAGCATTGGACATCGAGATCAAATTTCATGGTTCTTGTACTGGAGTA
GGAGGCACCGGGAACCTTGTATGACTGTTGTGTAGATGGTCTGAACTTCTACATTGCACG
CAACCAGCATCATATTCAATAACGTGTGACCTTTTGGGACATCCACACAGTGAATGTTCA
TATGGAACGCCTTAACTCCCATCCTAGTTTTCTCCAGCTGTACGATATCAACAAATTATA
AGGCTGGTCGTAATGTCATACATGTCAACTAGGCATATTTGATCAAGAGGCATAGAATTA
AATGAAGGGAGAGAGATTTTTGAGTATCATATTATGATGTTGTATCATATTAATTTTTTT
GCTACAATGTGTCATGCCTGACAATAAATGAACTTTTCTATGATACTAACAAATGATACT
ATACACTACGGGTGTAGTATCATACACTAGTATCATTATGATACTAGTATATGATACTCT
CATTACAACCAGCCTAAGGCCCTGTTTGGAACCATNNNNNATTATAATAATCTGGATTAT
GAACATA