Map Locations of contig_1571824 (4215 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1571824

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15895 3 1333 bp AK372119 Available Available None





CDS Structure of MLOC_15895






Contig Sequence (4215 bp)

>contig_1571824 4215 assembly3_WGSMorex_rbca.fasta
TAGAGATGAATGTATCTAGACTTATTTTAATTGTAGATACATTCATTATATGCATTTTTA
GGACAAGTATTTCCGGACGGAGGGAGTATATCTTAGTTTGACAATGCGACAACACATCAG
AGCTTCACTAACACTACTCATTTCGGCAAAATATTCTACAAAATCACATACATTGGCTCC
AGTAATTGCCTTTTTTTTTTACTTGGAAGGTTAGGACAATGTAAGAACGTGTACAAAATC
CACCCCCACAAAATATTACACATCCAAAAATATATCCCATGTTACCTTCATTTGTGGAAT
GTCAGAGATGCAATAAAAACATCATTTGTCTCGGTATGAGGCCTACAGATTAATCAGGTA
AAATAGAAAGATGCGGAACAGCAGGTACTCCCAAAGAACTGAGTCAAACAATGGACAGTA
CTGTAGAATTATTGCAGTTAACAGATTTGGCATACATATTGCACAGCTGCTCCCAGAAAT
GAATGCCTTTACTAGTCACTGATTTGGAAAGTATTCATTGCTCACTGCACATGCAAAGCT
AGCTACCATGTGATAGAGCTGCCAAGGTGCATCCATCAACCATTGTGCTGAATCCATGGG
AGTTCCAGTGCCCATCATTTATTCCAGTACAACAATACACCACCTTATTGAGCCAATCCT
CACTAAGCTGCATAGTTTGTAAAATTGTACAAAATCCCATAGAATGGCTCGGAGTAATCG
CCAAGAATTTTTTACAAGGGGGTCACGGGAATGTAAAACCTGGGTGGAATCCCCAGGGAA
ACATTATACATCCAACAATATATATTCAGGCTCCCTCGATTTGTGGAACCCAGAACAGCA
TAGCGGAAGGTTGGGCGTTCAGAGATCAGAGATACATTTGCCACTGATGAAGTCTACCAC
CTGCAAGACTGCCTGGTCAAGCGCCATCGTCACCGAGATCAGGTTTTGCAGAAACTCCTC
GGCTGTTGGCTTCTCCCCATCAACAATGTCGGTCACAGCTTTGACAAAGATAGCGGGTGT
TGAGAACAAGTCAGCAACATAAGCCACCGCTGCTCCCTGGAATGGCAAGCGAGAAAAAAA
AAACAAGTTAGAGGTCTACAAATTATAGTATGTTGTTAGCAGGTACAAGAGATGGAAGTA
AGGACGGCAGCTTTCTAAAACCCACCCACCGCCCCTCCCTCTCGCGGTGCTCCCCCGAGC
GACCTAGGGGAACCCTAACCCACCGCCGCACAGCGGCTCCCTCGCCCGACAGACAGGGAT
GGTGGCTGGGCCTTCTTTTCCACTCCAGCATCGGTTCGTTTGCGGCAGACTCGGGTGGGC
TTTCCCCCTCTTCTGCGGATTCAGGAACGGGCTCGACAGGCAGGGGGCGGTTCCATGGTG
CGGTGCTGGTGGCTCTGCTCGTTGTGCATGTGTGGGCTTGCCGAGGTGGCAGTGGACTTT
GGGACGGGGCAAGGGTGCCCCCCTCCCAACACCCGATGCATCTGGCGGCTGCAGCTAGTG
GCTACAAGAGTTCCCCTTGCCCAGACCTAGCCATCGAGGCCACCAACCCTATCAAGGTGT
CTGCTTTGGGGCTGGAAGGGGGATCTTCTGCCACTTTATGGTCGGCTGCGTCGGTACAGT
ACATCCATGGCCGAGGGTTGGGCTTGAATGCCGGGGTGGGCGGTCCTCATGGTGGAAGCC
GGGGTGCTCATGGGCGGAGCACGCAGTGGTGCTAATGGTGTTGGCCGGGGTGGAAACTCT
GACTTATCAGGATGGCGGCGGCGGCGTTCTGCTGTCGTCCCGTTGTTGAAGGTGTCGTCG
CGGTCTCTCATTTGTTGCCATGGTGCTCCGGAGGAAACCCTGATCATTGGATTGGGCGGT
GGCTGCGCTCCGCTGTCGTTGCCTTTCTGAAGGCCCTGCCTTGGAGCCCATTGTACGTCA
TGCACGGGTTCACCACATTGCGGTGGCTCATCCACGGTTGCAGGCCCCGACGACTTCACA
GTAGTGCTTAGTGTTTGACATGATGTTTGCTTGGAGTTATTTGGGATGGTGTTGCTGTTT
TCAGCATCTTTGTATGCAGCCTTGGGTGTGTGTGCTGTGGTGGCATATGTTTGTATCGGA
TTGTTCAGTGATGGTTGCTTTCTATATAAAAAAGGGGGGAGACCCTTTTTCGTCAAGGTA
CAAGAGATGGATCCAGAACTAAAATGACTTGACCGTCATAATTCAAACCAACTACCAGTA
CACAAAAATGGGTATCTTAATGTTGTTCTATTTAACTACAACTACAGTATAACCTAGAAA
GAACTATAAAGATCATTAAAGAACTACTCTAAGGCTCTATTAAAAGTATAGCTGCCTATA
GCCCAACAACTACCCTATCAAAATTTTAGATATCTTAAAGTTGTCCTGGAGAACTATTAG
ATGAACAAACTCCATTTGCTTCTCACTCACATGCGTTTGTAATTCATAAGTTGAACGGTG
ACGCAAAAGCATGTACCTCCATATCCTTGACTGTAGCTTCATTGCTCAGTATTGCTGACT
CATCATGAGGAGACATATCTAGAGAATCACCAGTTGACAGCTTCCCAACCTGAAAAACAG
AGGAAACAGAGCAACTTTAGAGAAGATGCCAACTCTCGAGTCTATGAAATGATATGCATT
ACTAAGTGAAAACTAAAAATTCGTTTCAGCAACAACACTGTTTAAAACAAACAGCAAGAT
ATATACATGTTGTCAAGCACGGCCAAAAAAATATTCCAGAAGATTGACAAGTGGTAACAG
TTTAGTGAAGCCCTATAACTTACCTTCAAATTGAGTTCTTTCACTATATTTGGGGTTTCA
AATGTTTTTCGCGCTCCAATTCCATAACTGTCAAAAACCTATACAAGAAAGAGCATGTCA
ACATCAATGAAGTTTGAACAGAGAATTAAGAGAATGAAAGATCAAACCACAAGTATCAGG
AAGTAGCATGGATCTTAGTTCTACATTTTTATCCGTGATGATACAGTCAAGCAGAAAACT
CTTACCGGTAGGAACAATATGCATTGGATTATTGAATGCATTTGGTAAAACTAGCTAAGC
ACAGGTATGACTTCCTAATTACACTGCAGTTTATCGATGTAATCATGCTATAAGAAAATC
GATGCAATTCCACTGTGTATGGACAAGAAACATAAGGCAGGAACTCACAGGAATGGGTAT
TCTCCTGTCATGGAATGCAACATCTGAAGCCAAGAAGACATCCCCAATACCTGCTCCTTT
GGCCTAAAACGCAAGAAACCACAGATCAGCAAGTGCATAAGAGGTGTGACATCAAACATG
CAGTACAATCAAAACACTACCTTGAAACCGCCTGCAGTACCAGCGTTGATGATAAGGTCT
GGCTTCAACAACTGTATAGAAGCATAAGTAACCAGAGCTGCCGATACTGTACCCACACTG
TCCACTCCTGAGAGGCATGAGCTCAAGGTAAGGAACAAAGTTCATATATGGACGATTAAA
ACAAACAAGCAACGCTGCTTCAGAGAAGGTCATCAAGAGAACTGAACTAGACTGCTCCAC
AGAGAACATGTCCTTGCAGCGAGTTGGAAATACCGGCACACTGACAAGAACTTACCGAGC
AGAGGATCTTTTCCAGGCCATACAAGGTCAATGTGGAGGCCTTTGTATTCGCCATGGTAC
CGAGTCCATGGGGCACCTTTAGGAAATCTGTATGGTGCGCACGAGGAAGAAAGGCGTTAG
GTTGAGAGTATCGGGCAGGTTACTAGTATCAGAGAAAGCTGAGGACCATGAACCTAATTC
GTCTATATCACGGAGCCAAAACAGGAATTATAAAATAGTGTGTTGGTCTGTTTTAACCAT
CTCCTAGCAGGAATTTGACCGCCTCGCATACAAACACTCTACCTAAAATTCCAACCAGCC
TGTCAAACGAAAGCCGTCTAGCACTATAATTTCACCCTCACAATTCAGTTTGGACGTCTA
TATAGGCTGTGTGAACTAACCATCCAACAGGGCCCGTCTCTCCAACAGAAACTTCCTGCC
ACTTAACCACAATCTGATTTACCACTTAATCTCAATCTGATTTCCGGAACAGCGGAAATC
CGTGCATTCACTGGTTGCTTATTTATTCTAAATTTTGTGCGGCTGTGCTAATTCCCAAAT
TTGTTTGTGTTTCCCAGGTTCGTGCATCAGCCAGCATGACTCGGATTGCGAACAAAAGGG
GGGGGGGGGGGGGGG