Contig Data
morexGenes
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Map Locations of contig_1571621 (6081 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1571621

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15823 2 1697 bp MLOC_15823.1 Available Available LOC_Os02g11050.1, FRAME:+3, EVALUE:0.0, 13102.m01245 protein 26S protease regulatory subunit, putative, expressed





CDS Structure of MLOC_15823






Contig Sequence (6081 bp)

>contig_1571621 6081 assembly3_WGSMorex_rbca.fasta
GCTTGGATCGGATCGCCGCGAGTATGACTGTGTCGGCCGCGAGTATGCCGCGGGGTTATG
GACCTAGAAAAATTCGGCAGGGCCCTTCGGGTTAGATGGCTATGGATGGCCTGGAAGGAC
CAGACGAGACCATGGGTTGGCCTAGAACTGCCTTGTGATGCCTCGGATCGTGTCCTTTTT
GCGATGGCCACGACTATCACGATACAAGATGGCTGCACCGTGCGGTTCTAGCACGAAAGA
TGACTGTAAGGAATGTGTCCAAACACAATGGTGCCGGACCCTTACAAGATCTCAATCAGA
AAAAACCGCACGGTTAAAGACGTGTTGACTGATGAAAAATGGCTGACGGACTTGGCGCAT
GGGCTGACGAAAACGATCGTACCTCAGTTGGCCTGGCTGGCGACACATCTCAAACGGATC
AACCTCATCCCCGATCGGCCAGACACTGTTGAATGGCGTTTCAACTCCGATGCAAGCTAT
AGTGCAAAATCCGCCCACCTGCTGCAATTCACCGGCTCGACACCCATGGAAGGTGCAAAG
CATATCTGGACGGGGTGGACGTCGGGCAGTGCAAATTCTTTTTATGGACAGCCGCATTGG
GAAAATACTAACGGCAGATTTGTTGCTGCGGCCTGGATGGAAGAACAACTATTCCTGTCC
TTTGTGTTAAAGAAATCTCGAGACCGCTTTCCACCTTCTCGTGAAGTGCCCTTGGGCCCG
AGAAACGTGGGATGCAATCGCAACCTCGGCTGACTTACTGTCGTTGCGACCAATCTCATG
GATGGGACTGCACAACATCAAAGGATGGATGCACAATCTGTTGGCAAAATGCACCGATAA
CACGAAGGAAAGGAACTCGGTCTCTCCTGCATTTAATATCCTGAGAGATCTGATGCGGGC
GGAATAAACGGCTATTCGATGATAAAAGGATGGACACTGAAACATTGGTGAGAAAAAAAT
TAGGGATAAAGTTAAAGTTTGGAACATTGACAGGAGCAGGGATTCCGTTTGACCCAAGCT
GAAGTCCTGACATTTTTGCCTTTCCTTGTTTTATTTTCTCCCTTTTTTCTTTTAGCACCT
TTTTCTTCGGTGCGTTTGCCGGCTCTTCCTCGGCATACCCTTGTACTGTTTTGCCTCCTT
GCTATCAATTGATTCGGTAGATCTCCTACCAACATTCAAAAAAAAAGACTCGGTCAGGCA
GAATGGCCAACATGATGATTGGATATCCTCATGTTATAGCCTATCGTTTAGAATCGGTGA
TCGGGTAGGCCCCGAGACTCAGACTGGTTTGAACAGACTCAGATCGGGTAGAATGGCTGA
ACTGAGGATTGAATCTTCTCTGACTGTTTATTGCACTTAGAATTTTTTACTATTGGGCAT
AAGCAGCAGCAACCCCCCAAACTCAGTTCTGCAGGATCCATCGATCAACCTTCATCCGTA
GACGTAAATGGTGTTGCTAACAAACTCATACGGAAGGAATAAATAAATAAACAAACAGGT
TCACAACACAGCCACGGCTGCAACTCGTACGTCTATACGCGTGGTAAGAGAAACGACCAT
AGGCAGGCAGATTGCGTAGCTAATTCAACTAGTTCGATCATCAAACATTATACGTAGTTA
ATTATGCTACCACATGCGGATCTTAAAAACTTTGTTAACCATGGAACGACACAAGTTAAA
AAATACAAGTCCAGCAACGTGCAGTTACACGCTTTCACAGCTTCAGCAAGGCGGAGAAAG
CTCGGGTCCTCACTTCCACAGCTTCCGCAAGGACATGTTCTTCTCATTGTCCTTCTTCAT
CACCTTGGCCACCGCCATCTCAAAGTCCTCCTGCGTTACGTGCACCCTTCTCTCGCGGAG
AGCAAACATTCCGGCTTCGGTGCACACCGCCTAAAGAGCAAAGACAGAAACCAGAGTGAA
CAACTTCATATAATCGCAAGGTGAAAGGGGCAGGGATGTTGTGCATATGGTGGTGTTATC
AGCCGTGCACAAGGAAATGCGAAAAATGTCATACAGTAATGTTTTCAAGCAGAAGAGTGC
GGAAAGCTGTCATACTTATGCTTGTTTTTTCAGAAAACTAATTCGAACTCAACAAACAGG
TAACAACATACTGTTAACCATTCAGGCCCTCAAACCATAATTGAACCTAATCTGTTGTGA
GGTTAACAAGTGCAAGAACTATGAACGGCCCTCAAAAGGGATCATTCATGAACAGGTTCC
AAAAATGCACAAGGACTATGAGGACTATAACGTGAGCATGCTTCTCAGCCATCAATGCAA
CAAGTGCATGGTGCAATATTCAATTTGGAAGAGATTAAAATTTGTTTAACTACATTTTTT
CGTTCTAATTTAATAAGAAAGACACCAAACAGATCCAGATTGAGAACTGAAACGTGGCAT
AGCATGTAATGATCAGAGATTTATGTAGAGACTAAACCAACCTTTAGCTCAGCTCCTGAA
GCGCCATTCATCTTTCCCGCAATCTTTTTCAGATCAATTCCACGCATCAAGTTCATCCTC
CTTGAATGAATCTTCAAGATGTCACCTCGTGACTGAAGGACAAAAGATTAAGCACATTGT
CAGCACAAACAAAATCATGTAGAATCGTCAAGCATTTATAGGTTTAAAGTATGAAGCACA
TACATCCTCATTAGGATTTGGAAATTCAATCTTCCTGTCTATGCGGCCAGGCCTCAAAAG
GGCTTGATCCAAGATGTCTATCCGGTTTGTTGCCATCAGAACCTGCACGGACCATACAAG
GCATCATGATAATGTTGCTCCGTATGTATAATTAAGATAATACTCAGAAACAACAATTAT
TAAGTAAAGCATACCTTAATTTTGTTTGATGCTTCAAAACCATCAAGTTGGTTTAGCAGC
TCAAGCATGGTCCGTTGCACTTCACTATCACCGTTGCCAGTTCCAGACTCCATTCTAGCA
GATCCAATGGAGTCTATTTCATCCATGAATATAATAGATGGTGCATGCTCCCTGCAATAA
TTTAACCAAACAATTAGCCTACATCAACAGAGGATGCACGTGGAACTATTTCATATCACA
GGCAAATAATTTTAGCTGTACAGCTTTTAAGCTTACCTAGCCATAACAAAGAGTTCACGA
ACCATCCGGGAGCCCTCACCAATATACTTCTGAACCAACTCGGAACCAGATACCCTGATG
AAGGTACAGTCGGTGTGATGAGCGACTGCACGTGCCAGTAATGTTTTGCCTGTCCCTGGT
GGTCCATAAAGGAGGACACCCTGCAAAAGAAGAGAGTAAAATTTTCTGCTATGTATATCA
ATGAACGAAATTAATTAAGACAATTCTTCTAAATAATCAAACCTTTGGCTGGGCAATTCC
AAGGCTCTCAAATAACTCAGGATGTTTGATAGGAAGCTCAATGACCTGCAAATGGAGTTC
ATGAGTCAGATGCAAAATACGATGCATTGACAATGCATTGAAATTCTACACAAACCTCTT
TGATCTCCTTGATTTGCTGATCAAGACCTCCAATCATATCATACGTGGAATCCGGGACCT
TCTCAACTTTCATAAGGTTGACCAGTGGATCAACTTTGCTTGGTAGAACCAAATGAAGCA
TATAGCTATCATTCCGAAGAGCAACTCTTGTCGAAGGTGTGATTTTTGTAATATCGATGC
TCTTATCAATATCTACTACATATTTGCCTTCTGGATGCACCTGAACAATTACATCTGAAA
AGTCAGTGACAGTTTGATGGCAAAACTATAACAACTTCCGTTCAGAGCAGACAGCCAGAC
CAATAAACCTCAAAGAGCGACAAAAAATCATGAATAGAGCACAATGACCAAGACAATAAA
AAACATCTCCAGCACAATAACAGCCAAAAGATCACTTTTAGCTCACGAAACAAAGGAAGC
AGCACATCATATCGCTCTTCCTTAGCGCGTATGTGAGGTGTTTGAATTCATTTGAAATTT
TTAAGTAAGTGATAAGCCCAAAAATAAGGAGCACTGATGAGATCTTACACTATGTACCTT
TATCATATAGATAATGTGCAATAGTAGAAGGCAATGTGTAAAAGAAGAAATAATTTACCT
TGACTAGAACCTTTGATTTGCCCATGACCTTCACCACCTCACCAACATAAGAGCCAGGCT
CTTGGAGCAACTGTAGCTCTTCCCTGAGCATTCTAACTGCAAATAAATAAAAAATGAGAC
AATTTAGAGGGAAGCACTAAATGAATTTAGCTCAAGCAAAAAAGAAGTGCCAAACCTTGA
ACCAAGATAGGAAAAAATAACTTGAATCCTTAATAGGCATCATTATGGTACAAGGCAATA
TTGCTAAGCTGATAGACATCGTCATGGGACATAAAAAATAGGGCAACAGAAAGATCGCTT
AATCAATTGCACAGTCCAGTTGTTCAAGAATAGTCATATTTTGGATTATTGGTACCAAAC
TACCAATAGTATGCATGCATTAGAGTAGCAAAAAGCGCAAATTTCTCACAAAAAAGCAAT
AGTAAACGCATAAAATTAGGAAAATTTGTTTATTGAGGAATAGTCATGTTTTGGACTATT
GGTACCAAGAGTATGCATTAGAGTAACAAAAACACAAATTTCTCACAACAAAAAAAGCAA
CATTAAATAAATGGGTACAATTGGGAGAATCTAGCTATTGGAGAGAAAGATTTGGGCAAA
AGATAAACAGTGTTCCGTTCCTCGCAACCATGAACGTTCATGCAACAGGATTATCACAGA
AATACAGGAGTACCACTAGTAACTGAAACGCAGTCAGCCGAGAGGGAGTACGCCCATAAT
ATGAGCAATTCGCTGCATGTTTTTGTATCAAAACAAAATCACAATAACTAGAAAATAACA
GGGCATCTTCAAAGCTAGATTATTATTAACAAAAGGTGGTTCTTTTGAGAATTTCTACAT
ATCGGCACAGCCAATCACCGTTTGCCCAGTGACGAGACTAAATATTCCGCATTTTGCTAA
GATTACGTGCACAGAGTAAGCTAGGGTTTCGACTGACGCGATCCAATGGTTCACGCAAAA
AGGCGCCATCGCTAGGGTTTGGGGGAGGCGCCAGGTGGAGAATCGAGTAAGGTACCTCGG
GAGTTGAGGTCGTTGCGCTGGGCCTCGAGGCGGTTGAGGTTGTGGGTCTTCTGGCGGATC
TGGAGCTGCAGGTCGTGGATGTGCTGCAGGTAGTACTGCCGCAGCCCCTCCCCTCCGCCA
CGCGCGCCCTTGGCCGACTCGTCGCCGGACGCGGCCGGCGGGGGCTTCGAGATGTCCATC
GCCACCGTCGCCATCCCCGGGGTTTGGTTGGGTTTCTTCTCCCTGCGCTCGACGAAAGCT
TTATTCCTCGGCCTCTTCTTCTTGCGGCGGAAGAAGAAAGTTTTTTTTTTCTCCTCGGGC
CGGAAGCGGAGAGGGTTGTTTGGGCTGGGTCTAGATGCCGCTGGCTCGGTACGTTCCTTG
CTTTATATAGTCCGTTCCTGCGAGGATGTGAGGCCAAGTCGGTGAGGAGGTGTGTGGATA
GAGAGCCTAGTGTGGAAAAAAAGTTTTACATTATGGAACCAAGTAGATCTGTCCATGAAC
AACCCGGTCCGAAGGCTCGAACCCGAATCCCAACATTTGGGCCGGGTTCGGGCTCCACTT
TCTTGCGTGAAGCCCGGCCCGAAATCCTGAATGAAGCTAAAAATGTACATATAAATGTTT
TTAATTTAAAATATAGGTATAATAATTTATATAATATAATGAATAAGATTAATTTAATTT
AAAAATGTTGTTGTTTATGTGCTTCGGGCCGGGCCGGGTCGGGCTTGGATGTGGGATCTT
TCTTCAGGCTTTGCCAAGCTCGGCCTGAACCCGACCCGGCCCGATAAAATTTTTTTTGAA
CCGAGCATAACACCCTTTTCCATTACTTCAAACGGAAATACAGCAGTACCACAAAGTTTT
GCCAACACAAAAACAGAGAAAAGTACTGGATACGCCAACATGCTCTCGCAGACTACCAGC
TCTCATCTATGGAACAGCCGCTCGCCATCGAACCGACTGCCATAGCCTGAAAGCCACTAA
TCAAAGCAGAGCAGGGAAAAG