Contig Data
morexGenes
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Map Locations of contig_1571572 (2478 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1571572

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15798 1 1294 bp MLOC_15798.1 Available Available LOC_Os01g46660.1, FRAME:-2, EVALUE:4e-24, 13101.m04798 protein transposon protein, putative, unclassified
MLOC_15797 1 317 bp MLOC_15797.1 Available Available None





CDS Structure of MLOC_15798






CDS Structure of MLOC_15797






Contig Sequence (2478 bp)

>contig_1571572 2478 assembly3_WGSMorex_rbca.fasta
CTGAAGCCCTCGCCGCCGCCGGAGACCCTCGGGAGCCCCCCCCCCCTCATCGCTCCACCC
ACAGCACCCCCCAACCCCCCCCCCCCCCCCCCCCCACACACACACACACCAAAAAAAAAA
CACTCCTCCGTAGAACAGATCTTATGAATGACTGTGTGCTGCCGCCGCGCGGGGGGGTGG
TCAAGGAGGAAAAGAAAGCTCAGGTGGGCGACAAAGAGGCAAAAGGTGAGGGGAGTACCG
GCGGCCGTGGCCGGTTGGCTTGGATTGGCGGGAGGACGGTGGTTGGGGCCAGAAGGGCGG
CGTCGGCAAAGGTTGGGACGAGGAGGGGGTGGGGGCGGCGCGCCGGACCCCTGCCTGACG
AGGCGGGCGGCAGCGTGCTATGACCCTCCAGGCAGAAACGAAAACAGAGTAGTACTAATA
ACTAGACAGATAGAAAAGGCCGGCTATCACAGCCGACATGAAGAACAGGAACTAGCGGTT
CAAAATCTTCCTCCAAATCTCAAGTCCTAGATCTTTGTCACCTAATGACCTAGCAACAAA
TCCCCAAAATCGATCATGCACCACGATTCTTTGTTGAACAGTGACATTCTCCAGTTAAGA
AAACACAGCACGCTCTAGTTCTGAGTCACGACTTCACGAGACATTCGCGTCAGCTTCACC
GCTCAAGAACTGCTACATCGTCATTCACTTTCATTTGTCATCAGCCTTCATGAATTCATT
CTGACTTTACACCGCATCCGGGCCGAGCGCATAGACTAGGTGAAGGCACAAGGATCCGAA
GCCCAAAATAGTGCTGGAAACATTAGCGACCTGAAATTGCAAAATGATACAACACCCGAT
GAATCATAGATATATAAGTTTCATATATGTGAACTATCTTTCTATCATTTTTTTGTCTCC
ATGACCAACTGAATCAGGAGTTTTTATTTATAAGCTTACCTCAAACATTGTGTGCTGATA
CGTAAGAACGGCATACATAGCCCAGAAGAGAGAGATGATGAAGTTTGATGCCCTTGAATA
GATTAGCAGCGGTCTCATGTTCCGAATATTCATCGGTGGTGGATTGGCAGATGGACGGAA
AAGGCCGTACTGTAATTGACAGGCAAATTCAAAGTACACGCATTTAGACTAAATAAATAC
TCATGTACTCTTTCATGGACTGTATATTGGTTTTTCAGGTATTATTGCAAACTCACCACG
CTGATGTAGGGTATGAACTGAGAAAAGACCTGCAGACCAGTAGCAGCAAGAGCCATGTCG
TGTGCTGCCATTGAATCCTTCTGGATAGGTCCTAAGACTGCAAGCGACACACTAAGGCCA
ATTATGGTGGCAAATGCCGTCAATGACCCGAAGCATACCTGGAGTCACACACAAGCATAG
TTCATACGTAACAACAAGTATGCAAAAAAAAAAAAAAAAAAAAATCTGAATAAACATGCA
AGATTCAAGATAAACAGATAGCTGTGCAGTTATATTACCATTGCATTCAAGTTCCTGGGT
GCGGCAATTTTGATTGTAATGTACATTGTTAGAAGAGCAAGCCCGACAGCATTTGATAGA
ACTGCCTCGACTCCAACTGTTTTCCCATCCTCCCCATGCAATTGCACAACAGCAAATAAT
AGCCAAGCTCCTGTCCCCATCACAGATCCAATGAAGTCGATCATCGTGCAAAATGCAGCG
GTCATGATCATATTGTTTCCGGTGCTCCAGAAAACAATGATGGGATTGCAGTATACAAGG
ATTGTGAGAATGCATCCTAAAATTAAAAATTCACAAATTAGTCATAATGATGGGCATTGT
ACAAATGAAGCATTTGTAAAGACCAAAATTCATGCAGCCAACTCACAAAATAAGGGGTTC
GACTCCTCTTGCGTTGCTACCGTAACTATGTTGTTTTTTCGAGAAAACGCTTCTTTTCAT
TTCATTGAACATGAAGAAAATAGAGGCACAGGTACAACCTCCCAGCAGGAGGGACACACG
CGCGCACACACCACCGTCCTCACCAAATGAGCAGGTGAGGAGGTGCCACCAACTACAAAC
AGCAACGACGAAAGGTCCTACCTTGTCCAGCCTCCAACCATGAATGGCAAGGCAACTAGA
CTCAGAACGTCAAGGCTGCATCACAGCCATAGCGAGGCGCCTCCAAAGAAGATCATATCT
CGAGGGTTGCCCGGGCCAACGGACCTTCCACCCCATGTGCCTAGGAGAATCGACAAGTGG
ATGGCAGGACCCGGACGGAACTAGCGAAGCCATCGTCTTGGACACATCGGCGCCGGCATT
GCGCCCTAGACGTCCAAGCCCTATGCTGCACCCCACATGACAACAACGCATCGCCAGCAA
GCCTCGCCGGAAAAGACCGGGGAGGCCACCATCTCCAGCTGCCGCATCGGGGACTCCAAG
TGCAACCCAAGCAGCGCCAACGAACTAGACTAAGGCCTTGTTTGGCAGGAAGGGGTTGGG
GAGGGTTGTGGAGGGGGG