Contig Data
morexGenes
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Map Locations of contig_1571555 (5719 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1571555

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15791 1 1988 bp MLOC_15791.1 Available Available LOC_Os02g47180.2, FRAME:-3, EVALUE:0.0, 13102.m05308 protein WD repeat-containing protein, putative, expressed
MLOC_15790 2 1450 bp AK372052 Available Available None





CDS Structure of MLOC_15791






CDS Structure of MLOC_15790






Contig Sequence (5719 bp)

>contig_1571555 5719 assembly3_WGSMorex_rbca.fasta
ATATATATCTGGTACTTTTCTGAGCTGTTGCATAGTTACATCATAGATGATTTTCTCTTT
CATAAATCTTGCCACACATATAATGTTTTTCTGCCTTCGCCACTGTTAAGGATCAAAACA
GTGAAAAATCCGCATGAACGGTGGAAGGGCGCCGGACTCGGGTCTCGTCGGACACTCTGC
ACTGCAGCCCGGTCGCGGCATCCGGAACAAACCCCAACAAATTTGCAATCATGCAACGCT
ATCCGGTACCCGGAGCACCGATGGACCTTTCCCGTGACCAATCACCAACCCACAAAGAGC
ACGCGAGAGATGGAAAATATCTTGACGCAAACGGCGCGGGAGCCACCGCGCAGCCACTTC
GCGCGTACACGTAGGCACAGGAACGGTGGAGAAAAAAAGCAACGGGGACGTTCTTTCTAG
AGCCGTCGCGAGCGCGAACCCCCGAACCTTCTCCAAGCCTCCGTCTCCCCTCTTCTTCTT
AGTTCTTAACACTCGCCGCCCGGCATCGCCGCCGCAGAATCCCCAGACTACAGACAACCA
ACCGCTCCCCTCGCCCTGCCCTGCTCTGGATTGATTGATTAGCTCCGGGGACCTGCCCAT
CGACGGTCGGTCGAGGGATTCGTCGCTCGTGAATCGGATCGATGGACGTGGACGCGGCGC
CGGCGCTCAAGAGGAAGGGCGCGGACGCGCCGGAGCTTTGGGTGGACGACGACATCGGCC
CCGGGTTCCCCGTCGCCTCCCGCGCCACCAAGCTCCGCCGCCTGGTACGTCTCCCCTAGC
AACCCAACCCAAGTACACAACCCGACTCGCTCCTTGCTCTCCCCTTCTCGGATTTGCTAA
TTAAGCGGCGGCTGTGCTTGTGTGTGTTTGGTTGTGGGTGTGCGCAGGACCCGGACGTGA
TGCCTGTCGTGCCCGGCGCGGTCGTGCTGCCACCGGGGACGCAGCCGCCGGTGGCGGGCT
TCGGGGTGGTGGAGGAGGCGCCGATGTGCGGCGACGTGGCGGTGGTGCCGGTGGACGTGG
CGCCGCCGGAGGTGGCGGCCAACGAGGAGAGGGCGATCGTCTTGTACCGGCCCGCCGAGG
CCGAGCGCAGGCTGCTGCTCGGTCCGCTCCGGCCCGGCGGCCATCTCCGCGTCAGCCCGG
AGTGGATCCAAGCGCTCGATGGTACGTGTGCCTCCGCGCTTTCCTCCGTTTCCCCGAGTT
TCGTCGTTCATTAATCTGGGATCATCCCGTTCGAACTTCGGGTTCAATCTCATTGCTGTG
ATGTTCCCTGCTGGTTGGAACGACGAATCTAATCTGCGAATTGGTATGTTATAACGCAGG
TATGATGCTGCAAGAGGCGAGAAACCACCGCGCGCTGTTCGAGGGGCTTGCCGGAACCGA
GACCTCCAACCTGGCCATGGTCCCGTGGGCGCCGCCCCGCGCCGAGGGGGCGCCCACGGC
CGCCGAGATGATGGAGGCCGAGGACGGCCAAGGCGCGTCCATGGAGGTCGAGCAGGACAG
GGCCGACCAGCAGCTCCCAATGCCCCAGTGGCCGCAGCAGCCGCACTGCATGGTACAGCA
GCAGCCGATCCCGGCGGCGAGCTTCCAGCCGAGCCCGGTGACGTGGTCATGGTGAAGCAC
GCGTAGTCTTGGCGTAGGAGGGAGCAGAATCCGTAGGTGCAGGTGTTGGTGTGCTTCCAT
GGTGGTTTTGATCAGCGCGATGATCTTCCTGCGCTTCGGCCTTCAGTGGCGGCGAACGAG
CAGACAGGATGGGAGGTGACGACGCCGTCCGTTTTTGCTGGAGTGGCACGGAGGCGTTCT
CGTCTGTGGATCCCAGCAGTACAAGAGACAGAGAGCCTCGTCTGCAAATGCCCGTCGTCT
TCCATTTTGGTTTTGGACCAGCAGAGCAGAGGAGAAGAGAGGTTTATGGCTGTATCCATG
GCGATTGCTTTTTTCAATCGAGCCCCAATGTTCCAAAAAAAAGAAGTTACACTGCCAAAA
AAAGTAGAGTCTCCTAGCTCTGTGCATTTCGCCTTACTCTTTTCCAAGTGCTCGAGATAG
AGGATTTTCTAGTTCCAATTTTGACGAGTAGTATGACGTCAGGCAATCTACGAAGAAATT
TACACCTCCTCCTTACTCGAGCTAGTAAGCTTCCGCTTATGCCAATGCAACGAGCTTATA
CGGGTATAAAGCATTAGATCATTACAAAACCTACAACTAACACACAACTTAACGCACCGC
ATCAAAGTTCATGAAGTAACCAGCTCCTGTACTACCTTTGTCAGCTTCTCCGTTGCGGTC
TTCAAGTATGGACTTCAAAGGGCATGTGAATGTAATGCTTTGAACTGAGGTTGCTTGCAC
AGATTCAGTAGGGTAGAAAAAATCGATTTCCGTTTCAATAGAGGCACGCGGTGGATTCCT
GTTGATGCACACGCAAACATATCTGATCTTCTATTGATGCTCACGCCCAGAGAACAAATT
AACTCATCTGTTGGTGCACTGCCAAATAGACATGATCTCTGTTACATCAAACAGCCTGAC
CAGGCTCTACATTTCGAGGGGGGTACTCCCTGTAAGACGTTTTTTCAAGCTTGATAGGTT
CAGTTTCCAGATCAAGATTATTATTATGCACAACCTCCGTCCAGCTTAAAAATACAGGAA
AGATGCACATGGCCAGTCCATGCTATACCCCCTAAGGCTTCTGGATGGTAACGAGGTTCA
GCAAATAAATATACGCATACAAAGTAAAGCAATCACAAGCAACCAACAAAGACACGCGGC
ATTTGTTAACGAGGTTCAGCAATGTGCCTACATCCCCGGGAGCCGAATTTCGGCGGCTCC
ATCCGTATATTATCTTATCCACATTTTAGGCAGTACATGAGCGGTATTACATACCCAGGA
ACTGTATTTAGCATGTTTTCTGTACACACAGCACGGCTGTCTCCCTATATGAGTAGGACC
ATATTCCAGTTCAAGAGATTGATTGTTGGCATTGTTCGTCTTATCGGATATGTTTGAAGC
TGTTGAACATGCCGGTGTGGGAAGCCTTGGGCGCAGGCTTGGCCACCTCAGGAGTGCCAA
ACACGTCCCAGAAGCGGAGGGTCTCGTCCGCAGAAGCCGATGCTACCGTGCAACCGTCAG
GACTCTGCAGTTTCACAGCGCGAGAAGACGATCAAACAACCAACAGGTTTAACATCTCAA
TTAGCATCTGCCAAGAAAAGAACTGGTGATGGGAGCGTACCTGTGCCATGAAAAGAACAC
GGGAGGTATGGCCACTGAGTTCGGCCATCTTGACCATCGAAGGGTACTTCCACAATGTCA
GCTGGTTGTGCGTGAACCCGTGTGAGCTCAGCAGCTCCCTCTCGTTCTTGTTCCACAGAA
GAGAGCACACCTGCGACCCGGTATCAACCGAGTTGAGGCATGCGCCCGTGTGCGTGTTCC
AGAACTTGATGCACCGGTCGCTAGCGCCACCGCCGGTCGCCAGCAGGTTGCTCTGGAATG
GGCACCATGCAAGCGCCTTCACGGCGGCCATGTGGTCCTCCAGCCTGTGCAGCCACTGGT
TGCGGCCTGGGGATGGCATAGAGGATGCCATCGACGCATCCCAAATGTGCAGAAGGTTGT
CGTTGCCACCGCTCGCCAGCTGCTGCCCTGAGCCAGACCACTTGAGCCCGCACACCTCCT
GGCTATGCCCCTGGTACGTCTGCACGGCATGGTCCCTGATCCTCACGTCGTTGTTCACGA
TCCTGCCGTCCATGCAGCCGGTCGTCAGGATGTTGTCGTTCCATGCCAGCGAACCCACCC
TTGACTCGTGCACACCTTTCAGAGTTCTCAACTGCATACAAAGAAGGATATTAGGCATCT
GATCAAGCTGGTTAGGACATAGTTAGACAACATTCTGGGATGCTGGAAGTGTATGTTAAC
CAGGCGGTTGGAGCTGGTGTCCCAGAGCTGGATGTCAGACGAGTTGAGCCCAATAGCAAG
ATGCTGGCCATCAGGAGCCCAGCTGACGCTGGTGATGGGGCCGTTGTCCTCCTCGACTGT
CATAAGCTCAGATGTGGATCCACTTGAGGCGTCCCACAGGTACATGGTGTCGCCCAGCGC
AATGGACAGCACGTCCCTGCTCCCCCAGTCCATTAGGTTGAGGTAGTAGTCGTCGACGAG
GTCCGGTGCATCAAGAGTCCTCTCGGCAGACTGCATTTGTCAAGTGACATACATCAGTAA
CCACCACCAAATGCCACTACATCTGTGGCTTCAGTGTGCATTAGTAGAACCACCGAGTAT
GCGCATACCTGGGGAATGTAGCGCCTCTGCTTGGACGGCTTAGCCTGGTGAGAAGAAACC
GTGTCGGCAGCGAAGACCTTCTCCGGCTCCGGCGGCTTGTTCCTGAAGGCGAGGATCCGC
GTCCGGTTGTTGAGCAGCTTCTCGGCGAGCAGCCTCCGGTAGGCCTCCTTGGACGGGGAT
GCCGCCGCGTTCTCCTTGTCCTTCTTTCCCTCCGTGAGCAGGTAGTGCGCCACGTCCATG
TCCATCGCCGACCGGTCCGGGATGAACCTGTCCCCCTGCACGCACGCACGCGCCGAAAGG
GAAAACAACGGGTCAGGCGTTCCATCGAACACCTTACGCGCAAAACGCATCTGCGGGAGG
CTCGGATCTAGGGACTTACGTAGCACTTGGCCGACGGGTTGCGCGTGCTCAGCGACGGCA
TGTAGGGGCGGGATCCGGCCTCCTGGAGCGGTGGCCGCTGCACGGCGCCGGCGCGGTTCT
TGCCGGAGGAGATCGAGCGGGAGCCTGCATCCATGGTTAGAACAGAAGAAACAGAACAGG
CAAACAAATAACAGTAATCGCGACAGGAGTAAACGCGGATCGATGGATCGATCGAGCAAA
AAAATAGCACAAGAACAGGATGCTGCAATTGAACGACGAGCGGATTGGCGAGCAGAGACG
GGGATCTTGCGAGGGCGAGAAGGATTCGTCTCCCCCGGATCGGCGAGGGAGGCGGCGGCG
GCGAGCACGAGAGCGGAGGACCGGAGGAGAGAGAGGAAGTCGCAGATTGCTCGATGGCTT
GTGAGATTTGGGGATTTGATTGCTAGCGGTATTTGTAGGGATCGACGACGGGCGGCCGCA
GGCTCGCAACGGCTAGTCGCCAGGGAAGAGGCAAGGGAAGTGTTCTTTTTACTATATGGC
CCTTAGAGGATCTTACGTTGTCGAGTGACCCTTAAAAAAACTTATTTTATGGTATGATCC
CCCGCAAACTGGGAAACACATTGGGCGATACACTGTGTGACGGTAATAAATCCCCGTCGT
CAGTCACGTCTATGTGGCAAAAGTCAAACTCGTCAAATATACCGGTGTGTATCCCATTCC
CCATCATCTCAGATTATTAACGTAGAGGGGCTAGGATATAAATGTGATATTTCAGGGGCT
CACGTTCAAAAGAGCAAAGAGATAAGGAAGCACTAGGGGCGTGTTTGGTTCCATTAGTGA
ACATCATTGTTCAAGAAATCGGTAACTGGTAGCTACTCAGTTCGGTGAATCGGCCTATTA
ACTGGATTAATCTGTTGACTATTAATCGGTATATTAAACAGAAGCTTGCCAACTTATATC
TAAATTATTTATGTATCATACCTTAATTCCATGCACCTAGCTATGTAATATATCAAAATA
TTCTATTGTAGGCATATAAAAAATAGATAAGAGGTAAAATTCATAATCGTTATACATCCA
AATATATAAAATCTCAAAA