Map Locations of contig_1571512 (5521 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1571512

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15779 4 2898 bp MLOC_15779.1 Available Available LOC_Os02g09740.1, FRAME:+2, EVALUE:0.0, 13102.m01068 protein STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed





CDS Structure of MLOC_15779






Contig Sequence (5521 bp)

>contig_1571512 5521 assembly3_WGSMorex_rbca.fasta
AGGGCATATTTCCAACAGAAGGCCCCCGGTGGATAGCGCTAAAAGATTGTCCTCTCCTGG
CGGTGGCTAGGGTTCCAGCCGACGGGGAATAGAGGAAAACGATTTTTTTAGACCTGCTCA
AATACTTGTAGGACCGTGAGTGTATTTTATTCTTTATTTTTTATTTATCGATGTGCCAGC
TCGCCTCCCCCTCCAACAGCTCGTTGTCGTCCGTCCCCCACATTTACGAAGCCAAAAGCA
GGCCGCGGCGGTACCCCACACCGCGGACAACCGCAGCGAGACAAGGACCCGGGAACCCAG
AGACAGGAAGCGGATGGGGGAGAGGGACCAATCCTTGCCGACGCCGCACTGCATCCCCCG
CCCACTGCCTCGAGCAAGCATGGCATCGAGCACTCCTTTCTATATTAACTGGCCTCGGAT
AGACAGATAAGAGGGGCCGTCGGCAATGGTGAATTGGTGATCACCGCGGCCAGGTCGTGT
CAGCCGAGAAGATAGCCGCGAAGAGGGGTTTCCTAGCGGAGAGAGGGCCAAGAATGGCGG
CGCTGGCCGCCGCCATCGCTCTCGCCAGCCTCCTCCTCGCCCTTGCGCCGGTGGTCGGGG
CCGATACCGACGCCGCCGGCGGTAATGCCGCCCCCCCTCTTGGTTTCTTGGCACGCACTG
TCTGCGATTCCACTGCCTGACGGTTGGTATGCTCTGGGTTCTTGCAGTTGCGGCTCTGGG
GAACCTCTACACCTCCTGGAACAGCCCGGCTCAGCTCGTCGGTTGGTCGGCGGCCGGCGG
CGGCGACCCCTGCGGCGCCGCATGGACGGGCGTCTCCTGCTCAGGCTCCGCCATCACCTC
AATGTAAGGGCTTCTCTCTTGTCCTAAGTTGTTTACTGACGAAGAATGGAATTGGACTAA
GCGATTTGCCACACTGTGGGTTGATCCTTCTTTGCTGTATTTCTGTCAGCGTTTGCATCC
TTTGAGGTATTTTGGACACCAGAAAAGTGTTCGAACAGTTACTATATACGCTGGCCAGAA
AAATCTCTGTTGATTTCTAGGACAAAAAGTTCTCCTTTTTCTTTCTTTTGCACGCATGCT
GTAAAAAACAGAGATTTTATGCAACCCTGCTCTGAAACTGACTAGTTTTGTTTGGCTAAG
CTTTTGGTACCAGACTTTGGAGAAACCTCTATATATTTGTTCTTTTCAATTCAAAGTTGC
TGTAGACTATCAAAATGTCACTAACAGAAGATTATGGAACTATGGATGTGGTATAGTAGC
AACTAGTGCCAATTTTACTTTACCCTTTATTCTGCTCTTATCGGTTTTTATCGTTGTTGT
TATACGAATTTCTCTGAAACGAAGTTAATCAGCACTGATATACCCTGATTCCACCCCTAT
TTTGCAGCAACCTTTCTGGTATGGGACTGAATGGTACTCTTGGATACCAACTGGCCAGTC
TAGTGGCACTGACAACGATGTATGAGCTAACACCAGTAGTACTACAAATCATCATTGCTC
TGTGTTTTCCTTTAAATTCATATTATTTTCATTTCTTTACTTGCAGGGACTTGAGTAACA
ACAGCTTGCATGATGTAATTCCGTATCAGCTGCCACCAAATCTGATCCATCTGTAATGCT
TCTCACCTTGCACATGTTCATTACAAGTAATTTGTGCTTTGTTGTTTTACTTATGGCGAT
AATGCAGGAATTTGGCGAGAAATAATTTTTCCGGTGACCTCCCATACTCTATATCCAACA
TCTTATCGCTTGGCTACCTGTAAGTTGCTTATGACCACAAAGATGTGATTAAATTAGTGG
TGGTTTTTTATTTGACACAGTCTAACTACGAATAACATCTGCATGCAGCAATGTCAGTCA
CAACTCTCTGTTCCAGGAAATCGGCGAACTATTTGGTGGCCTCAATTCGCTTTCTGTATT
GTGAGGCCTACTGAGAATCTTTTTTTCTTCGTCTTTTTTGGGTGCTATGAGTTACATCAT
TCACTAAACCGAAGCTATGAGCTATATCATTCTCTGTCTTCGTCTTTTTTGGGTGCTGAA
GCTGAATTTAATTATGCAGTTATAACTGTGAAATGTGCGTTGAAATGATGATCACCGGCA
CTAAGGCGGGCCACTGCATATGTATATGCATTTTCCACTTATTACATAACTGCATCTTAT
GATTTTTAAAATCCTTTCAGGGATTTATCTTTCAACAACTTGTCAGGGAATCTGCCAGTT
TCTTTTGTCTCTTTGTCAAATCTTTCTAGCCTGTAAGTATCCAATAGTCTTCAACTCAAT
CTGCTTGCTTTTGTGTTTCAGTTTCATTTTTTTTTTCATAATTCTTTACTTTCATCCCAC
TGTGTAGCTATATGCAAAATAATCAACTAACAGGCACCGTCAATGTCCTCAGCAACCTAA
GCCTTACTACACTGTAAGTGACTTCCCATTTGCCAACATGACTGCTAATATACCTTGCCT
GCTTTTTTATCTGATGTGTGCGGTAATTGCGCCTTTAAACAGAAATATAGCAAACAACAA
CTTCAGCGGCTCGATACCCGGGGAGCTCAGCTCGGTTCCAGACTTGACGTAGGCACTGTA
ACATATTTCATTGCTATTTTACTACACAAATCATAATTTCTAGATGCTGATGGGTTAGTG
CAATTGTAACCATAGTGCTGGAGGGAACTCATTTATCAATATGCCTGCATCTCCACCGCC
AATTATCATGCCACCATCTGGGAGTCCACTTGCTCAGCCAGACCGTCCTCGAGTACCAAT
AACTTTTCCAAATGGCCCTGAGGATGAGATCCCTATCGATGAAGGTGACAAGAAGCAAGG
CCGGCAAACAGGTCTGCTTGTAGGGTTGGCTGTTGGCTCAGTGGCTGCTGCTTCATGTAT
ACTTTTCGCGTTGGTGTTCTGTCTTCACAATCTCCATAAAAGAAAGGATGGTGGTACCAG
TGAACCGAAAGACTTTGTAGGTGCTCTTGCAGTAAACATAGACAGAGGTATGCTCCTATT
TCTTCGCGCATGATAGTTTCTCGTTACCACGTGAAGTAAACATAGGGATTTGTAGGTTCA
CTTGCAGTAGGATTAGACCTGTTTGAGGTAAATTGAATAAGAATATGTTATTTTTGCTGT
TAGCAAAGTAAAAAGAAAAGGTAAAAATGGAACAGTTGCAGGAGGCCAAAATGTTCATCA
ACTTTAAATTACTAAACTGTGACTGGTTGGTAATTCAAATCCTTACAGCCATCTCGTTTT
TTTTTTGTGTGTGTAGATTCTAACAACAACATCCATCAAGACTCTCCTGTAGCAACTTCA
GTGCTCCAGCGGCCTATCGGGACTCCTGAGAGGGCATATGGTATAAATAGTTCTCCAGCA
AAGAAGATAAAGGTTCCCGGTGCGGCCACTTCTTATACTGTTGCTTCACTCCAAGTTGCT
ACAAACAGCTTCTGTCAAGATTCCCTCCTAGGTGAGGGTTCACTTGGTCGTGTTTACAAG
GCTGATTTCCCCAATGGAAAGGTAAAAATACATTTACATATGGTTAACAATTACTTTTAG
TGCTTTACAAGCATACCATTGTTTACATATTCAGCACCCATTTTGGTTTGGGCCTTTTTT
CTATTTTGGCTTCATCATACACTAGAACTGAACCGTGCGCCCGGCCACAGGTACTTGCGG
TGAAAAAGATAGACAGTGCTGCCCTTTCCTTGTATGAAGAGGATCATTTCCTTGAGGTTG
TATCAAACATTTCTCGGCTTAGGCACCCAAACATCGTATCGCTTACGGGCTATTGCGCTG
ACCATGGGCAAAGGCTTCTTGTATATGAGCACATCGGAAACGGAACGCTGCATGATATGT
TGCACTTTTCCGATGAAGCGAGCAAGAACCTTACATGGAACGCCCGCGTGAGGATTGCGC
TAGGCACTGCTCGAGCTTTGGAGTATGTTGTCTGAATCTAGTGCCTTTCACTCTGCACTT
TTCTGGTGAAGCGAACTTATAACAATGTACTGCTAACCTTTATTCAGGTACCTGCATGAG
GTGTGCCTTCCCCCTGTTGTACATAGAAACCTGAAGTCATCAAATATCCTGCTTGATGAA
GAGTGCAGCCCGCATCTGTCTGACTGTGGGCTTGCCGCCTTTTCGCCAAATCCTGAGAGA
GAGGTAAGCAACATAGCAGCAACATATTCAAAAGTTTCATAGATTTTTTTCATTTTTAAT
TGGAATACATCAGTTATTTTTTTTAATGTTTTGCCAGGTTTCAACGGAGGTGCTTGGCTC
ACTTGGATACAGTGCCCCAGAATTCGCCATGTCAGGAACATATACTGTAAAGAGTGACGT
GTACAGTTTTGGAGTAGTGATGTTAGAGCTACTTACGGGCCGTAAGCCGCTAGACAGGTA
TTATTTCTGATCTGCAAAAGCACACTATCGCTGTAAATTTGAACCAAAAATCACCTTTTG
TTCTCTTGCCGAGATTTGAACCATTGTGTTGTACAGATCCAGGGAGAGGTCAGAGCAGTC
TCTTGTCGGGTGGGCAACCCCGCAGCTTCACGACATCGATGCGCTCGCCAAGATGGTTGA
CCCAGCAATGGATGGCATGTACCCTGCAAAATCGCTCTCCCGTTTCGCCGACATAATCGC
GTTGTCTGTCCAGGTACATCACTTTCTTCTCTCACTCATATTTTGTGCTGCATATGGTCA
TCTGTCATTCCTTCGAACATCTGGTGTAGCTCGTAGCTAACTATGAACACCATTCACTAG
CAATGTGATCATTCACCCCTGACATCTCCAAGTAAATTCTGTTGATATACGAACTGAATT
ATTCTCTTCAGAGAGGTAGAGTAAGATGCTAATTTTTCTGTCTGCCCTTCTGTAGCCGGA
ACCGGAGTTCCGTCCACCGATCTCCGAGGTCGTCCAGCAACTTGTGCGTCTGATGCAGAG
GGCTAGCATGTTAAGACGGCAGTCGGGAGACGATCTAGGGTCTTCGTACCGTGCCCCGGA
GCGTGAAGGAGGCGCGTCGGACGCCTTGTGAGGCCAAACCCTCCTGCCAGCTATAAACCA
GAGCTGTATTATCAGAACATACCATTTTGTGAGTATTAGTATGTGTCACTTTTTACTCAA
TTTTCTGTCTGGTATTTCTGGATCTTCCGGTTATCTGTTTGTACCGAATATGCTGGGGAT
TTTGTCAATGGCTTGTATAGATATAGATATAGGATTCTGTTATGTTGATCAGTTTTAGAT
AAAAAAGGAAAGGAAAGGGAGAGAAATGGATTTGTGACAAGTTGAATGCGCACGCCTCTG
TCAGACGGCGACCTGTGTGTGCCTTGCCAGCGTGGGAAACCTCACTGATTCGCGGCGAAG
CACACGTCGCTAGTAATATATACTCCCTCCGTTCCTAAATATAAGTCTTTTAAGCGATCT
CACTAGATGTCTACATACGGAGCAAAATGATTGAATATACACTCTAAACTATGTCTATAT
ANATCCGTATGTAGTCCACTAGTGCAATCTCTACAAAGACTTATATTTAGGAACGGGAGT
A