Contig Data
morexGenes
Links



Map Locations of contig_1571400 (4991 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1571400

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15720 8 2777 bp AK365228 Available Available None





CDS Structure of MLOC_15720






Contig Sequence (4991 bp)

>contig_1571400 4991 assembly3_WGSMorex_rbca.fasta
TATAGCGCGGGTCATAGGGGGCCACCAACCATAATGGGTTGGGCGCCCCCGATCAGGGCG
CATAGATCAAGATCCGGTGGGCCCACGCGGTGAGAGATCAACCTATCAAGGAGAAGCAAA
ATCTAGATGAAGCAGATGCTTAAACAAGTGAAGCTTACTTGCTTGCTTGGTCGGTATCGA
CGGCGAGAGCCAGCGGCAGTGCGTTCAAGCAAAACTGGTCAGCGACGATGAGGTGAGCTG
AGCCTGAGTGCCCATGGCCATGGTCCTCTCGTTTTTTATAGAGCTTCACTGTCGCTGGCT
ACCAACCAGCAAGTCAAGGCAACTCTATTGAAAACTCATTCGGATCCGCTTCATTCCATG
CTAGTTGACTCTGTGTTGGATGTCCCGTGGAGTGGTTGGCACCCCGGAATGCTGGCCATT
TTCTTGGCGATCGGACGGCCGGCCGGCCGGTCAAATGCTCAAAGATCGACTATATTATCT
GCCCAACCTTAACTACTGGCCAATGATACCTGCAAGATATGTTACACTGGAGCTCCTATT
CCATCACCTGGATAGGGACGCCATCTTCACACAAGTCTTCAAGGTCACTGCGTGGAACAT
CTGGAGTCAAAGAAACACCAGGTTTTTTCACAAAGTCTCTAATCCTAGTCTGGACTCCTG
AAGATTCTATTCAAAAAGGATAGTTATATTCTCTGTTTGGGTCCAAGCTCTGCACACTCC
ACCTCACACCATTGCCCCTTGATGTATATTCCCAATACATCTTGTAGATAACACCTCTGC
TTCAATGAACAAAATTATACAGTTCCCCTGCAGGCATCACTCTCCATTAACTTGCACACA
CGAAATTGGTTAAGACAGGGTCACCAAGATCTACTTAATTTGGCAAAGCGCCACAGTTTT
CACATGCGCCTCATGACTCACAACAAAATTGACCCTATGAATACAGCAGTTTCTAGTATA
CAAAACCCAAAGGCCCTAAGCCAGTAAAACGCCATCCAGAAGTGCCAATTTCCCCGCTAA
AATGAACCAACAGGCTCTCCCGACAAAACTGTCCAGTATGCAAATGCACACAGCATTCCT
TCATTGTGGGCTCTTCGTTTTCTCATCCGAGTAACCAGCAGCCCTCCCTGTCCTGCCTAC
CAAGACCGAGTCTGGCGCTGGACCCTCGTATTCTCCAGTCATACCGCGGTAGGACCGGGC
CTGGAGGTATTCAATCGCAGACTTCGCGCCTCCTTGGTAAAGAACTGCATCGCTATTTTG
GTTTCGGGTGCTTAGGGCTTTCTCCGTTAGCTCGGCCAGTGCAAGTGACGTTTCTGAATG
CTCCTCGTTTTCTGTGGGGCCAAATGGTGGAAAAACACGTATGAATTAGAAAAAAATCGC
ATGAATGGCGAGACCAGGACTAGACACATACTTGGAGTTTTCTATAAGGTTCCACATGAA
AGATAGAACTCAATAGGTAAACACACTAATGTTGCAGGAACTTCAATAGGTTATAGAACT
AGTGCACACAGACAGTGACAGATTTATGATCCAAGTGCATAATACCTTCAGGGCAATCAT
CTTCCACATAGCCGCCTTTGATAAAAGAAAAACGTGCTTCTTCACTTCTGCTTGCAACTT
CTGGTTTCTCCGAACTAATCAATTCCTTGAAATCCAAAAGATATTCTCCAGTCCATTCTC
TTCCTCTGAAAATGTGTCACGGATCCAATAATGATGATAAAGAAGATATTCTTCAAACTT
AATGCCACATGTATACTGGTGTCAAAATGACATGTACCTGCTAAAAGCTAATACAGCTTC
AAATGGTGTGATAACTGGGGCTAAAAATTCTTTGCTATCCAATAAAGCAGTTTGGGCACA
AGAAACATATACGAAAACTTCACACTGCCACAGAAAAAATCTGTCAGTTAGTCTACATAT
GAGAAGCAGAACAAACAATTAGAATTCACTAGCACCTCAGGAAAATTGGCAAGCTTAGCA
GAATTAGGCCGTCCCATGACCAGTGTATAAGATTTCTTTCCAGCAGCTTTGATCAGATTT
TTCATTTGCTCGATTATGTCAAGGTAACCAGCTGCATCAACAACCAATGTGCCACAGAAC
CACAATTATATGTCCACAACAGTACCAAAGTGATAAGCGTAAATATCATATGCTAAGGGA
ATAGTTGTAGTCAAGTTCAGTCAATAAATCTCTAATCATGAAAAAACAGGAAGTTCAACT
GGAAGAAAAATATAATCAGGACCTGATCCGGTCAAACCACCAAAGAAATTCAAAAAATCA
TGCATATGTCCCGTTTTGAACTGCTTCAAACCAGTCGAATAAGCCTTGGTCTGAACCAAT
CAGACCGGACTAGATCGAACCAAATCAACCCACATACACAAGTTATTCGATGCTCAACAT
ATGGCATGTTTACCCTGAAACACTGAGGAAAGCGGTGCTAAAATCTGAATTCTAATTCGA
ACAGTTCCCCAATACCACATTGCAGAGCCAAAACCGAGCTTAGATTTCCATGCTCACCTA
CCTAACATTGGCATAACTATTTTCAATATTAAAGGTAACAATGTACATACCAACGCCTAG
AGTTCCCACCAAAATGCCAACAATACTTGCATCCTTTGCCTTCTCCACAAGGTAATATCT
ACAAACAGTATGTATTATTATTAGTACTACAAAGATAATGTGTACATGAATTTCAAAGGA
AAATAATACCATACATATGCAGCATAAAAATGTACCTGCGCCTAAGTATTTTCATCAGAT
GAGAGACATCCCTTGAGAATTGATTTGCTATTGTGTCGTATCTAACTGCATACAAACGTT
TCATTAATATTAAATATCATTTCATTAGAAAGATCTTTTCTCTTGGGAGCAAGCATTAAA
TAAAGGATGCTCGAATTAATGCTACCACATGATACCATACCCATGTACTGCATGCCAGGG
TGCCAGGCCCATAATAAAACGCAGGAACCCACTGGCTACTATATGTCAACAATACAAATA
ATTTAGCACAAGCCATTAATACATGTCCTAAAGGTCAAACTAGCATGCTCTCCAAGTCCC
CATACTGTAGTTTTCATATTGTCATATAACTGTTTACACATATGTCAAGAGAAGCAAACT
GGATTGTATATTGATATATTATAGAGCCAAACTAGAAAATTAGGCAAAACATGATTTGCA
GGAATTGAAGTAATTCTCCAGCCATAAAATGGAAAGAGGGAAACAGACCTATATCACATT
TATTGAAAGTAAGTGCAACGTTGGCAAAAGCAGAGTTATCTTGTCCAATCCAATATAACA
AATAGTCGTCCATTTTCTCATCGGTGGATATGCGCCATGTAAGGCCTCCAAGATTATACT
TGCGCGTGGACCCTTCCACATTACAGCAACTGTTAACAAGTGTTGCCAAATCATCATTGT
GTGCAGGAAAACCATCATTACGAGTGCTTCCATTGGATTGAGAACATTGCTCTTCTGCAG
CAGGACTTGATGACGGACTCATTTCCGAACACAGAACTTCTGCATAATGGATTTTGGAAT
TTTGACAATCTGATTTGCATAATTCCACAGTGGCTCTTTTAAGATCTTCCAAAGCATGTG
CATACTCTAACCCACATAACGCCTATTTGATAAGTCAGATCAGCAAAATACTATTACAAG
TATAAGTGGTGAATATAAGAATTGATAGCTCGACAAACTGAATCAGCAAACAGTAACGAT
GATGGAAACATGCAGCAACAGAAAGAAATAGTTAGCAGACAAATTAAACCATATGCAGGC
ATTACATAATTATTACCAGAAACAGGGTAATTCATGCAGATGTAGCCATTAACGGCAACA
CAACAGAATGATCACAGCTAATTTAGAGTCATGACTTAAATCAATTTAGCCCACACAAAA
ATGACCAAAATCGATTTTGTGTACTTCCTTGCGAAGGATATGGCCTAATTGATTACATTT
GAAATAAGAAATATTTAAACATAGAAAGAAAATGCCTATATCCGACAATGCCATCTTTTC
TAACTTATTAATTTTATTTAATATACTTAGAAAGGGTGATTTTACTTCAGTAGGAAAGGC
AAACATTTTCAGTATGATGATGTTATGTATGAGCGGCAACCTTTTTCAGTATGTTGATTT
GTAATGTAGTTTAGAAAAATTGTGTGAACTCCAGAACTGAGAATTCAATAACAAACAAAC
GTATTATGCTTATTCCATAAACTAAAGCACAATTTCAGCATAAGAAATAGTTGAGGCATA
CCAGAATGGGTTTATTGATTTCTCTCGAGCAATTTAGCAACAAGCGGCAACCGCTTTCAG
TATGTTCATTTTGTAATTTAGTTTAGAAAAGTTGTGTGAACTCCAGCATTGATAATTCAA
TAACAAACAAACAAACATATTATGCTTATTACAAAAACTAAACCACAATTTTCAGCATAA
GAAATAGTTGAGGCATACAAGAACGGGTTTATTGCTTTCCCTCGAGCAGTACAGCAATGA
GCGGCAACACGAACTGATGTCCAATGGTGCTTTCCCTAATACGAAGAAAGCTGGCAAATT
CGATGTTCTGCATTTAGATTTGTTCTTGTCAGCACACAATTTTGATATGTGAAACTAAAA
GGTAATGGTTTCCAACAAAAAAAATCATCAGTAATGATTGGAATTTATTGTATGTTACAG
TTGTGTAAAAACATAAACACGAAATATTGATATGACAAGCATCTCCCACTGACATGATGA
CTGAATCTAAAATGGGGAACATCTTCAATTAACTATCATCAAGTTCCGGCTGAATTCAGA
GCTGGCAATGCCTTTGCTAGTAATACCATCTCTGAAATGATTGCCTGGTAATAACTATTA
ATGCCCCTAAAAGCCACCAGAAATCGTACTCCTTCGTAACATCACTCGGATTAAAACGGG
GCGCAACAACTGACGAACGGTGAGGGGGGGGGGGGGGGGGGGGCAGAGGCGCGCGGGGGC
GCGCGGGGGGG