Contig Data
morexGenes
Links



Map Locations of contig_1571398 (3631 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1571398

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15717 1 460 bp MLOC_15717.1 Available Available None





CDS Structure of MLOC_15717






Contig Sequence (3631 bp)

>contig_1571398 3631 assembly3_WGSMorex_rbca.fasta
CCCACGCCGTGGCGGCGTCCACGGCTTCCGCTACGGCCGCCTCCCCCGCGTCGTGAAGGC
GCCGCCGGCCAACGCCGCGTCCGCCTGCTTCTGGTAGCCGGCCGGCCAACGCGTCAGCGC
ACTTGCTGGCTTCCAAGTCAAGCTCTTGATCGCTTATTAGGTAAAAGCAATTAGCCGGTG
AATGGTAGCAAGTTAGCGGTGAGTTCTGGAGCTCTACTCCGGCTCCATGGAGTGTTCGTC
GTTGCTTGCTTGCTCAAGCGTGATTGGTTATGTGTGGACGTTTTTTTCCTTCTTTTTGGT
GTCTGATCACTCTGAATGAATGAATTAGTTATGTATCTATATGAAACCTTCTCTGTTCTT
GCTGGAGTGCCTGCTTCTCTGATGCCTCTGCTGATTTCTTATCTGAGTATGTGATTGGTA
ACTCTGGAATCAATGGTCTCTGTTCCTGCCCTGGCTGTGGTGTTTGACTTGCGCCTCTGC
TCATTTCCTGGCTCCATACGTGACTGATTTGTTAGATATAAAGTAAGCAGAACATGGCAG
AAAACAGAAACACTGTAGGATCATGGATGTGAAATTGCAGTTCAGTCAAACGGAAGCACA
CTTTTTATCTGTCAAGAGACAGATGGCAAGTTTTTCGTCAAGAAAAACAGCGTGACAATA
ACTATATTTGCCTCTGTGTGTGTGTGTGTCGATCGGATCATGCAAACAAGATGAGGTGGA
GAAAGGCGTTTGGACTGCAATTTGGGCAGGGACCAAGTCCGAAAGACTGAAAGAAAGAAG
GGAAGATTCTCCAGAGTCTCGGGTCGGTTTTGAAGTGGGTGAGAATGTGTGGCGAGCCAC
ACCTCTCCTCCCTCCGTGAGCGTGAACCAGCCCAGCTTTATTTCAAGTGCGCGTCGCGGT
CAAAAGGCACGGCAGCGTGGAGGAAGAGGATGGCAAATTGCCATTGCAGTGGCAGCCTCT
ATCTCTCTGTGTCCCTTTCCAGTCCATGACGATGGGTCTCTGACTGACTTTCTCCCATGG
CCGTCTTTGTGGTGGTTCAGTTTGTGAAGGAAATTTCACAAGTTTTTGCATCCCGTGAGA
GAAGAGAACATAGTCCATTATTTACTCCTGCGTGTCGTGGGTACGTGCTACGTGCCATCG
CCATGATGATGGGTTCCTTGGGTTGGGTACAGTACAACGCACGAAGAGTGCATGCCCGAT
GTGCCGTTCGTCGCGTCCAAACGGCTTTATGACCATCATACCGGGCGAGGAACCGTACTG
CCGATGTACCGGCCGGAAAATAATCCGATGTAACTGCCCCAAGATACTCCGAGAGTTCAA
TCGATAATGTAACACACGTACGGTACAGATGAGTAAGTAACGCACATACAGGTACAGAGG
GAGGACGTACTAGAAAACCCAATCGGAGTGATTTGATTCTTTATCCGTGACCCCGGTTAA
TTGGAGTATTAGCAGTGGCCCAGTGGGGCACTAGAGGATACTACTATACTGATGAGTGCA
CTCGAGTACTTGTCCACGTTTGGTTGCGACCCCAGGCCGGCCCGGGGTCGTCGGGTCCAG
TCACTGTCGCTGCGCATGATTGCCCTATCCCATACGCATACGCCAAGATTAACGAGTAAC
TAACAATCCCGGTCGCCGGCTTAATCACGTCCACCGGGCTTGCAACCGTATATTAAACCG
GCGTAGGCCCGATCGGTCGACCACATCCATTAGAGCATGGTTAATAGTATAGCCAACTGC
TGGCTATAAGTCATCGTATAGCCCACCTTATAGCTAGCTTTTACAATAGTTAGCTACAAA
AAAGTACTATTTTTATCATATATGGTCCACATTTCATTCTCATAAAGCACCTAGGAGCAC
GTGCTAGAGCTGGCTCTTCACGAAGAGCCCGCTTCCCTTCTTTCTCATCCAACTCAGCAA
TATAGTATTTTAATCCTTACAGCCCGCTGACTGTACCTTATTGTACTTGCTCTTATAGGT
TATACCGCATCAGTATCCAATGGCGAATGGCACCACGATGATGCATGAGACGATGAGGTC
GGTCCATCTTAATTAGCCCATGATGGCCATGGCCCTCTATGTGATACGTATTTCGGAGCG
GCGCCCGCTTAATAATTGATGTACTGTATAATACTTTCTTTGTTTTTAAATATAACCTTT
TTAGATATTTCATTATAAATTACACACAGATGTATATAGATACACTTTAAAATATAGGTT
TACTTATTATATATGTAGTTTATAGTGAAATATCTGAAATGTCTTATACTCCCTCCGTTC
TTAAATATAATTCTTTTTAAGGTTTCGCTAGAGAATTACATATGAATGTATATAGACATA
CTTTAAAATGTTGATTCACTCATTTTATTCCGGACCATTAATGAAATTTCTGAAAAGACT
TATATTTAAGAACGAAGGGAGTATTTAGTAAGGAAGGGACATACATGCATGGATGCATGT
TGATATGATTGCTCCACTCTGGAAGCAGCCTGTGGTGCCATGCGCAACCGAAGAAATAAT
CAAGACATATTGGTTCGGTAGAACCGGACGTTTCTTCCGTATTTTATTTACTGTTTCTTG
ACATGACGGCTCTCGTCGTGTAGACTGTACGTAGTGTGTAATTCAGTGTGTGAGGAGGAA
ATGATTTGTCATGTGCCCACCATCCTGCCTGCGGCATACGTGGTCGTGGTGTATCTATCC
GTGTACCCGTGTATGTATGTGCAACCGGAGAGGAGATCGGGTGCTTTAGTTTGGAAGCGT
ACGTGCAGCCGCGTTGCCATGCCACTCTGGTCTGCGGAACCAACCATCGCAGTCGCAGAC
AACATTTCGAACCAAGAGTAAAGCTGGCAGGCAGGGCATGAGCATGCTGCACGAGAGGGA
AAGCAAGCGTCTCAATTTGAATTCATCCGACTGACAGATCTCGCTTTGAGGCGAGCCAAA
CTGCTTTAGAATTACAAGCTGTAAAACGAAAGTGCTAGCACCTGTGCCCTTGATTTTTGT
TTTTGAAATTTACCGACTTAATTTATTTTTATAATAATCATATCCTTTTTAATAAAAGGG
ACTAAGAGCAACTTCAACGAAGCGACCCAAATCGTCAGCCCACGTTCATTTTGATCGATG
CGAATAAAAGTGAAGGCCCAACACGTCGATCCAAACCCAAAACACGTCTGCTTTCGTTTG
CGCAGATTCATTTTCAACCGAAAGAAGTCCACATAATCCCTCATGTTTTGATCGATGCAA
ATANNNNNNNNNNNCCAACAAGTCGATCCAAACCCAAAAGGCGTCTGCTTTGCGTTTGCG
CACATTCATTTTTAACCGAAAGAAGTCCACATAACCCCTCATGTTTTGATCGATGCGAAT
AAAAGTGAANNNCCAACAAGTCGATCCAAACCCAAAAGACGTCTGCTTTGCTTTTGCGCA
CATTCATTTCCAACCGAAAGAAGTCCACATAACCCCTCATGTTTTGATCGATGAATAAAA
GTGAAGGCCCAACACGTCGATCCAAACCCAAAAGACGTCTGTTTCGCGTCCGCGCAGATC
TATTTCCAACCGAAAGAAGTCCACATAACCCCTCATGTTTTGATCGATGCGAATAAAAGT
GAAGGCCCAACACGTCGATCCAAACCCAAAA