Contig Data
morexGenes
Links



Map Locations of contig_1571371 (5033 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1571371

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_15704 3 2021 bp AK366010 Available Available None





CDS Structure of MLOC_15704






Contig Sequence (5033 bp)

>contig_1571371 5033 assembly3_WGSMorex_rbca.fasta
GACCCGGTCTCATAGGATTTTTTTCCAAGATGTATGCAATTAATCTAAAAATTATATTTG
TAAACACCTACTTTTGTTCACAAATTAGAACAATCAACAATTTACACTAAAGGAGCACTC
GGTATACTCCATAAAAGACAACAATGTATAACAATATTGGTACTTATCTCACGACCCTTC
TGATTAACAAACTTAATGAGTTAAATGAGTAACTCGTGAGCTTGTCTCATCAACTCCTTT
TGTTAACGAGGTCAGATTAAAACTTGACTCGAGTCGTTAGTTGCTGAGTTCAAGTCGAGT
CGAGCCCAGCCACAAGTTACTCATTTAGCTTGTGAGTTTCTAGTTAAAATTCCAGCCCAA
GATCATATCATGCGTTAAATAGATAAGCAGTATGTTGATGTAACGGAAGCAACAAGAATG
GTTCAATTCTATCAAATACAATTGTGTGTGTGTGCGCGCGCGCATGAAGGTATGATGGGT
ATTTTGAAGCCAAATTGAGTAACTAATAGTAGCAAGCCTAACCACTCCAATCCACATAAA
TATCAAAAGGCTGCCGCCTTGCCTCATAAATTAGATTATACCATCTGTAAAGGCCACTTT
GGGGTTACATGACCACTTGATATGTTCGCTAACTTGCTTCAAAAGGATGGTAGTACGAGT
CACATAGACTAAAGTTGTTTTATCAGGCACTAATCAGCTTTGACAGCTTCCCTTAAGCTC
AATCATAATGCGTTCATTATTTCTCATCAATCCAAAAGAGGACGGCTTAAACAAAGTTAT
CAAAACACAGTGTTAATCCTATAATCTTGTGCAACTTGGGGAAGCAAGTTGCACTTTCCA
AACACAAACAGCAATAATGCAAGCAGCTTCAGGTTCAGACGTCACCATCTGAAAACCATC
AGCCGCACATGTCACTTTCCCATCTCCACCACACTTGAACCAGATTGATATCACTACAGC
TCTGAATCCATCCACCAGTGAGTTCATGTGTGCAAATATAGAAAAAAAAAGTCGGATCTT
GGATGTATGTCTCACATGTCACATGGATGATCCCACAGGAGCTGGAGGATATTCATGTGC
GTTTCGCGAAAACCGACCTGAATAATGAGATATATGGAAAACAAATCACTACACCAGCTG
AAAATGAGATCCATCTGAGACATTCACCCAAGATCCAACGGCGGTCGTTGATTTCTTCTT
CATGCTCGGACACAACATGGTGTTTCTACGATGCAGTCAAGTTCATGTCAAATCTGCCAT
GGATTTGCTGCCAACTCGATCATCCCTGCTAACCATTACTGGAAACTGATCAAAGTTTAT
GCATTATTAGAGGATATCAATCATCGATATATGGATCCACATATGTTATGAAACAAACAT
TAAAACAAAGAGCACGAGTGATGCTGCTAATGATGACCAAGCGAATTAATTATCCGTTGT
GCAGTGTAGCAATAAGTACAGCACTCCTTTTTTGTTAATTCACAACTTTGTACACATACT
CTGCATAAACAAAGTGCCTTCTTTTCATATATAATAACATGCATGGTGACAAGGAAACAC
TAAGCCCTACATCAGGAAACAGGCCTAATAGTCTATTGGCAAAGCAGTAATCATACAGGA
AGGCAGGAAGGGGGCAGGCAGGTGAGGCGGGCAGATAGCACATTCTACATTAATCTACGG
CAAACTGATGTAGGATCTGCGTCAGCATCCAGCAATCCCTTGACCCAAACAAAGCACAAT
GATTGAGCCTCCAACCAAACATGTTTTTTGGGTGGCAAGAGACCAATGCGGGACGGCGGT
GGTGCGCCAGCCTTCATTTCTTGATTCCCACTCGCCATTTACAACACTGCCCACAGGAAG
ATATTTTTGAGGCATCCAAGGGACATGGTTTTGTCATGTGTCCTTCGCTTGTTTGTTGAC
CATATATTCTCACTGGAACTGATATCCTGCAAACATTGACGAAGCCCTTCTGCAGCTTTC
CAGTCACCAGTGATCTTGGGAAATTGGTCACACACCGACAGCGCTGCCAAACGACAAGAA
CAGAAGCTGGTAGCTGCGAGGTACGGGGCACTATGAAGACCAGTTTCGCCAGCAAGTTTG
GCACTGAGGCTAGCCGTCCAGGATACATTGCATATCCACTTCAGTGATCATCTTCAGGCT
TTAGCATTCAGTAGGTTAACTAACTCGATACATTGGATGCCTACCGTAGCAGCCATTCGT
TCTTAAGCTTTTGATTCATGGAGATACAACAACAGAGTCTTCAGTTGAAACAGCCCATCA
ATGTTTTCCTCACTCTATCAACAACACGGTTCCTATGAGTTAGGCTGTTTGACAAGGGAA
ATTCTTTGCTGTCATCCAGGAGGAATCGGTAGACCTCCCATTGGCGCTCCGACGCTGCCT
GTCTCCCGATTTCTGCCTGAAATGAGAAAGGGAAAACAGTAAACACTAACTCTATTGTGG
ACTTAGTTCACACCTTTCAGTTAGGTTGTAACTCTTACAGAGAAAATGCAGATTCCAAGC
GCTTTCAGGGCCAAAGTAGCATCATAGAACACCCGTGGCCGGCCCTTCCCGGATAGTTCA
ACAGGGTTGGCAACAAGGAGTTCTGTATCAGGTCCACGGTTCACAATCATCACCCTAAGA
GGATGGAGCATTTCGGACCTCATGCGAGACCGCAGAGCATCCTGTTTCTCAGGATCAATA
ACCTTCTTGCCATCTGCTTGCTTGATAAAAAGATCCACCTCTCGAAAACCTTTCTTGTCT
GACCAGAATCGCCCATAAGTGACCTAGAATAGAGTAGTTAAAGGTAATAATTAAGCACAC
TGATGAAATCTCCTTTTTGCAAGCTGTCAATTTTGTATTCATTGAAGACGATACAGTGGG
TAAACAGATTCAGAGTAAACGGAGGGAGAATAATTTTTATCATCATAACAGCAAAGGAGA
ATTAAAATGCCTTTCTGTAAAACAAAACTAAATTTGACTACTTGATCACCAGTGTCTTCA
GATATTCAGAAAGTCTACATACGGTCCTCCAGGTACTATTTTTCTCACTCAACCTGAATT
TTGCATGTGATTGTATTGTTGTGAACTAAGAGGCTGTAATAAATCATAAGCTATGTACAA
CAAATGCATGCATATCTTCAAGTACCTTAATGTTGCAGTCCTTGAGTGTCCTCAACATGT
CATAAAGGAGACCCTTCTGATCAACACAAAGAATTTGGAGCAGTGTGTGTGCAGGACTGA
GGGAATTGTCAAAGTTAATGGTGGCCTTCTGCACCTTCTTCATCTCTGCACAAAGAGGTC
TTGAACTGCTCTCACAATCATCTAGTTCCAACCTGAACAGTTCCTCAGAGATTGTTGGTG
GAAGAGAAGAGAATCCTTGCTGGAACCCTTCCGCTGATAGGACTTCACAGGTTAGGGAAG
GACCTAAGGTAGCAATCAGCATCGAACAAATCTCTTCTTGCCTTTCCTTTGTATGCAACA
GTTCCCTTCAGATAGAAATATGAACTGTCATATATATAGCAGAATTATTATACCATGCAA
CGGACCGACACCATTTGTAATACGCGGCAATTGACATTACAGCAGCAGCCGTAGGGTGTC
AAGAGTGAAGTTAATGATTCAGCCACATGCAGAAAACACCTGAACTCTAAGATTGCGACT
GGCGGGACTTACATGCCATCAGTGATAAAGAAGAGGTTCACAACTCTCCCGTCAGGCGTG
GTCGACACCTTCACTCTCTGGATTATAAACTCCAGCTCCGACAGTATGTGTGTAACATCT
GTGAATAAATAGTATGATTATAGTCACAAAAAAAAAAACTGGATGCACAGACATTTAGAG
CACGAGGCAGGGAAGAAGTTAGTCCTCACCGTGCAACAGCCCCCTCCGGTCGGTCGAGAA
GAGCTTGAGGAGGTAGAACTGCGGGGGGCCAGGCTCGGTGATTTCAGGGTAGAACGGGAT
GGCGTACGAGGAAGGGCACATGGCCATGAGCCGGTTCTTGAGGCTCCCCCACCGGACGTT
GATGGACGGCGAGCGTGGCACCACCCAGAAAATCACGTAGCACCACTGCCCGTCCGTTGA
CACGTCTGCTAAATCCGACAAGCGCACGAGATTTAGACGGCAATGATGATAAAGAGACCA
AAAGACATGTACTACAGAATTAAGAAGCTGCAGACAAAACAGGGCGCTGTAGAACCGAAC
AGGTTGCAACGACGCCTCGTTAGTACGTAGTTTTTATTATATATGCTTATATCATGATTG
AAGCGCTGATGATGATTGACGGCGTGCACACAGTAAGACGAACATGAAAAGTCAGGTGGT
ATTGCCAATTATTAACAGGGGACATGTAAACTGGGGTGCCAACGATTGACAGTGATTGTA
CAGCGGCATGGACGGGAAAGTGCGGAGGAGATGCCAAGCTGGCCTCAGAAAAGAAAGCCT
GCCTTTTCCACGGACCGGATAATAGTGTGAGAGATAATCATGAAATCTGAAGAAACCACA
CGTCAGTCACTAATCCTGGGAAATCGACGAGCACGAAGCGGCCAAATGTCCCAAGCTTTA
TCTTGTCGGACCGGGGGAAAGGCGCCCTCGTCGAGAGATAAATCCAAACAGCTAACCGTC
ACCAGCCACGCTAATCACAGAGGGGAAAGGGGGATTTTTTTTTTTGGAGCAAAGATAAAA
TTACTACGCGCGGCACTTATCGTCCCCCCCAATCCCGGATGGCGGTGGCAAGAATCCCGC
CGAGGCATGCGATTCGCGCTCGCAGTCACTGGAGCAGGCGATTCGATCGGTGCGGCGGCG
GCAGGGGGGAGGGAGCGGCACCGGAGTTGAAGCACGGAAAAAAAGGATTTTGGGAACGCG
GGTGGAAAGGGGAGGAGGAGGGGGGCTCACCGCCGCGGGTGATGCGGAGGCCGAACTCGA
GGATGGTGCGGCAGAGGTCGCAGCCGAGGCCGGCCTGGTCGGGGCAGTTGACGGTGACCG
CCCCGTCGTCGCCGCGCCCCCCCGGCACTACTTCTGCCCACCGGTGATTCTCC